MGE detailed information
MGE type: Genomic_island MGE length: 67777 bp
Accession: NZ_LS992168 Location: 799407..867183 Organism: Escherichia coli isolate Escherichia coli str. TO60 Replicon: chromosome
Accession: NZ_LS992168 Location: 799407..867183 Organism: Escherichia coli isolate Escherichia coli str. TO60 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECTO60_RS03880 () | 795145..796323 | + | 1179 | WP_000095005.1 | type II secretion system protein GspL | - |
| ECTO60_RS03885 () | 796325..796861 | + | 537 | WP_000942771.1 | GspM family type II secretion system protein YghD | - |
| ECTO60_RS03895 () | 797919..798695 | + | 777 | WP_000124287.1 | ABC transporter permease | - |
| ECTO60_RS03900 () | 798692..799378 | + | 687 | WP_134163285.1 | ABC transporter ATP-binding protein | - |
| ECTO60_RS03905 () | 799407..800104 | + | 698 | Protein_762 | IS1 family transposase IS1R | Transposase |
| ECTO60_RS03910 () | 800521..800677 | + | 157 | Protein_763 | transposase | - |
| ECTO60_RS03915 () | 801128..801844 | + | 717 | WP_000634338.1 | hypothetical protein | - |
| ECTO60_RS03920 () | 802279..803966 | + | 1688 | Protein_765 | kfiB protein | - |
| ECTO60_RS03925 () | 804063..805097 | - | 1035 | Protein_766 | IS481 family transposase | - |
| ECTO60_RS03930 () | 805258..806820 | + | 1563 | WP_001305085.1 | hypothetical protein | VF |
| ECTO60_RS03935 () | 806862..808040 | + | 1179 | WP_001305084.1 | UDP-glucose 6-dehydrogenase | VF |
| ECTO60_RS03940 () | 808379..809548 | - | 1170 | WP_001161856.1 | hypothetical protein | VF |
| ECTO60_RS03945 () | 809583..811610 | - | 2028 | WP_000579513.1 | hypothetical protein | VF |
| ECTO60_RS03950 () | 811607..812347 | - | 741 | WP_000030749.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| ECTO60_RS03955 () | 812357..814033 | - | 1677 | WP_001305083.1 | Polysialic acid transport protein KpsD | VF |
| ECTO60_RS03960 () | 814057..815205 | - | 1149 | WP_000905920.1 | hypothetical protein | VF |
| ECTO60_RS03965 () | 815277..816260 | - | 984 | WP_001296394.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| ECTO60_RS26525 () | 817071..817226 | - | 156 | WP_000729638.1 | IS110 family transposase ISEc32 | Transposase |
| ECTO60_RS03970 () | 817658..818591 | - | 934 | Protein_776 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| ECTO60_RS03975 () | 818584..818979 | - | 396 | WP_000208384.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| ECTO60_RS03980 () | 819048..819893 | - | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| ECTO60_RS03985 () | 819978..820175 | - | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| ECTO60_RS03990 () | 820192..820680 | - | 489 | WP_000761699.1 | hypothetical protein | - |
| ECTO60_RS03995 () | 820677..821054 | - | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| ECTO60_RS04000 () | 821143..821511 | - | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| ECTO60_RS04005 () | 821561..822205 | - | 645 | WP_000094916.1 | hypothetical protein | - |
| ECTO60_RS04010 () | 822224..822445 | - | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| ECTO60_RS04015 () | 822508..822984 | - | 477 | WP_001186726.1 | RadC family protein | - |
| ECTO60_RS04020 () | 823000..823485 | - | 486 | WP_000849565.1 | antirestriction protein | - |
| ECTO60_RS04025 () | 823540..824358 | - | 819 | WP_001234620.1 | DUF945 domain-containing protein | - |
| ECTO60_RS04035 () | 824459..824692 | - | 234 | WP_000902034.1 | DUF905 family protein | - |
| ECTO60_RS04040 () | 824771..825226 | - | 456 | WP_000581502.1 | hypothetical protein | - |
| ECTO60_RS04045 () | 825302..826429 | - | 1128 | Protein_790 | hypothetical protein | - |
| ECTO60_RS04050 () | 826524..829646 | - | 3123 | WP_000820373.1 | autotransporter adhesin Ag43 | - |
| ECTO60_RS04055 () | 829980..830852 | - | 873 | WP_001069668.1 | GTPase family protein | - |
| ECTO60_RS04070 () | 832184..833674 | + | 1491 | WP_001305029.1 | DUF3987 domain-containing protein | - |
| ECTO60_RS04075 () | 833795..834367 | - | 573 | WP_001296389.1 | hypothetical protein | - |
| ECTO60_RS04080 () | 834453..834659 | - | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| ECTO60_RS04090 () | 835607..835756 | + | 150 | WP_071528377.1 | hemolysin activation protein | - |
| ECTO60_RS04100 () | 836089..836286 | - | 198 | WP_001547002.1 | hypothetical protein | - |
| ECTO60_RS04105 () | 836485..837054 | + | 570 | WP_000221563.1 | inovirus Gp2 family protein | - |
| ECTO60_RS04110 () | 837221..837604 | + | 384 | WP_000271011.1 | hypothetical protein | - |
| ECTO60_RS04115 () | 837601..837786 | + | 186 | Protein_800 | zinc-ribbon domain-containing protein | - |
| ECTO60_RS04120 () | 837825..839363 | - | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| ECTO60_RS04125 () | 839363..840460 | - | 1098 | Protein_802 | IS66 family transposase IS682 | Transposase |
| ECTO60_RS04130 () | 840491..840841 | - | 351 | WP_000624646.1 | IS66 family transposase IS682 | Transposase |
| ECTO60_RS04135 () | 840838..841263 | - | 426 | WP_000435655.1 | IS66 family transposase IS682 | Transposase |
| ECTO60_RS04145 () | 841635..841772 | - | 138 | WP_085949591.1 | transposase domain-containing protein | - |
| ECTO60_RS04150 () | 841924..842841 | + | 918 | WP_001149834.1 | N-acetylneuraminate lyase | - |
| ECTO60_RS04155 () | 842875..843750 | + | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| ECTO60_RS04160 () | 843799..845271 | + | 1473 | WP_000376547.1 | MFS transporter | - |
| ECTO60_RS04165 () | 845275..846105 | + | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| ECTO60_RS04170 () | 846151..846861 | + | 711 | WP_001296386.1 | N-acetylneuraminic acid channel protein | - |
| ECTO60_RS04175 () | 846874..847983 | + | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| ECTO60_RS04180 () | 848033..848968 | + | 936 | WP_001305022.1 | alpha/beta hydrolase | - |
| ECTO60_RS04185 () | 849004..849738 | - | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| ECTO60_RS04190 () | 849838..850824 | + | 987 | WP_000274668.1 | hypothetical protein | - |
| ECTO60_RS04195 () | 850976..852204 | + | 1229 | WP_096928816.1 | IS3 family transposase IS2 | Transposase |
| ECTO60_RS04210 () | 852704..854794 | + | 2091 | WP_001223344.1 | bifunctional siderophore receptor/adhesin Iha | - |
| ECTO60_RS04215 () | 855012..855171 | - | 160 | Protein_817 | transposase domain-containing protein | - |
| ECTO60_RS04220 () | 855656..855898 | + | 243 | WP_001296383.1 | hypothetical protein | - |
| ECTO60_RS04230 () | 856189..856548 | + | 360 | WP_001296382.1 | hypothetical protein | - |
| ECTO60_RS04235 () | 856552..856767 | + | 216 | WP_000266542.1 | hypothetical protein | - |
| ECTO60_RS04245 () | 857345..857667 | - | 323 | Protein_821 | transposase | - |
| ECTO60_RS04250 () | 857687..858196 | + | 510 | Protein_822 | L-lactate permease | - |
| ECTO60_RS04255 () | 858230..859762 | - | 1533 | Protein_823 | IS3 family transposase | - |
| ECTO60_RS04265 () | 860178..860600 | - | 423 | Protein_824 | hypothetical protein | - |
| ECTO60_RS04270 () | 860645..861535 | - | 891 | Protein_825 | IS3 family transposase ISSd1 | Transposase |
| ECTO60_RS04275 () | 861548..862699 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| ECTO60_RS04280 () | 862764..863024 | - | 261 | Protein_827 | IS3 family transposase ISSfl10 | Transposase |
| ECTO60_RS04285 () | 863296..867183 | - | 3888 | WP_001034083.1 | Serine protease sat autotransporter | VF |
| ECTO60_RS26530 () | 867433..867576 | + | 144 | WP_011076574.1 | hypothetical protein | - |
| ECTO60_RS04295 () | 868127..870328 | - | 2202 | WP_000973516.1 | ferric aerobactin receptor IutA | - |
| ECTO60_RS04300 () | 870410..871687 | - | 1278 | WP_000750130.1 | NADPH-dependent L-lysine N(6)-monooxygenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|