MGE detailed information
MGE type: Genomic_island MGE length: 16088 bp
Accession: NZ_LS992168 Location: 4505251..4521338 Organism: Escherichia coli isolate Escherichia coli str. TO60 Replicon: chromosome
Accession: NZ_LS992168 Location: 4505251..4521338 Organism: Escherichia coli isolate Escherichia coli str. TO60 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECTO60_RS22550 () | 4501921..4503378 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| ECTO60_RS22555 () | 4503615..4505132 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| ECTO60_RS22560 () | 4505251..4505424 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| ECTO60_RS22565 () | 4505452..4505748 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| ECTO60_RS22570 () | 4505976..4506248 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| ECTO60_RS22575 () | 4506462..4510391 | - | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| ECTO60_RS22585 () | 4511546..4512376 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| ECTO60_RS22590 () | 4513274..4517113 | - | 3840 | WP_001528154.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| ECTO60_RS22595 () | 4517487..4518011 | + | 525 | WP_000491818.1 | hypothetical protein | - |
| ECTO60_RS22600 () | 4518076..4518768 | + | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| ECTO60_RS22605 () | 4518801..4521338 | + | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| ECTO60_RS22610 () | 4521448..4521720 | - | 273 | WP_000405645.1 | N-acetyltransferase | - |
| ECTO60_RS22615 () | 4521732..4521962 | - | 231 | WP_000371715.1 | (4Fe-4S)-binding protein | - |
| ECTO60_RS22620 () | 4522143..4523774 | + | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| ECTO60_RS22625 () | 4523771..4524490 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|