MGE detailed information
MGE type: Genomic_island MGE length: 20421 bp
Accession: NZ_LS992168 Location: 4258511..4278931 Organism: Escherichia coli isolate Escherichia coli str. TO60 Replicon: chromosome
Accession: NZ_LS992168 Location: 4258511..4278931 Organism: Escherichia coli isolate Escherichia coli str. TO60 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECTO60_RS21225 () | 4256118..4256843 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| ECTO60_RS21230 () | 4256880..4257419 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| ECTO60_RS21235 () | 4257484..4258032 | - | 549 | WP_000695543.1 | type 1 fimbrial major subunit FimA | - |
| ECTO60_RS21240 () | 4258511..4259107 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| ECTO60_RS21245 () | 4259585..4259992 | - | 408 | Protein_4087 | type 1 fimbria switch DNA invertase FimB | - |
| ECTO60_RS21250 () | 4260092..4260610 | + | 519 | WP_000115885.1 | hypothetical protein | VF |
| ECTO60_RS21255 () | 4260629..4261849 | + | 1221 | WP_000343765.1 | ISL3 family transposase ISEc53 | Transposase |
| ECTO60_RS21260 () | 4261880..4262077 | - | 198 | Protein_4090 | type 1 fimbria switch DNA invertase FimB | - |
| ECTO60_RS21265 () | 4263531..4264247 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| ECTO60_RS21270 () | 4264267..4265373 | + | 1107 | WP_001295733.1 | N-acetylneuraminate epimerase | - |
| ECTO60_RS21275 () | 4265437..4266417 | + | 981 | WP_000991462.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| ECTO60_RS21280 () | 4267000..4268106 | - | 1107 | Protein_4094 | helicase YjhR | - |
| ECTO60_RS21285 () | 4268169..4269316 | + | 1148 | WP_085949154.1 | IS3 family transposase ISEc52 | Transposase |
| ECTO60_RS21290 () | 4269349..4269513 | + | 165 | Protein_4096 | GNAT family N-acetyltransferase | - |
| ECTO60_RS21295 () | 4269890..4270147 | + | 258 | WP_001054379.1 | YjhX family toxin | Toxin Detail |
| ECTO60_RS21300 () | 4270159..4270710 | + | 552 | WP_000123957.1 | N-acetyltransferase | Antitoxin Detail |
| ECTO60_RS21305 () | 4270762..4271508 | + | 747 | WP_000354249.1 | class I SAM-dependent methyltransferase | - |
| ECTO60_RS21310 () | 4271636..4271896 | + | 261 | WP_000077645.1 | hypothetical protein | - |
| ECTO60_RS26725 () | 4271934..4272050 | + | 117 | Protein_4101 | VOC family protein | - |
| ECTO60_RS21315 () | 4272295..4273416 | + | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| ECTO60_RS21320 () | 4273413..4273691 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| ECTO60_RS21325 () | 4273703..4275016 | + | 1314 | WP_000460845.1 | galactitol-specific PTS transporter subunit IIC | - |
| ECTO60_RS21330 () | 4275029..4275835 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| ECTO60_RS21335 () | 4275966..4276397 | + | 432 | WP_000606405.1 | PTS sugar transporter subunit IIA | - |
| ECTO60_RS21340 () | 4276409..4277041 | + | 633 | WP_000600624.1 | ribulose-phosphate 3 epimerase family protein | - |
| ECTO60_RS21345 () | 4277058..4277840 | + | 783 | WP_000082779.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| ECTO60_RS21350 () | 4278143..4278931 | + | 789 | WP_000251799.1 | IclR family transcriptional regulator | - |
| ECTO60_RS21355 () | 4278936..4279841 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| ECTO60_RS21360 () | 4279852..4281819 | + | 1968 | WP_000116325.1 | xylonate dehydratase YjhG | - |
| ECTO60_RS21365 () | 4281926..4283275 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|