MGE detailed information
MGE type: Prophage MGE length: 40895 bp
Accession: NZ_LS992166 Location: 2377788..2418682 Organism: Escherichia coli isolate Escherichia coli str. TO6 Replicon: chromosome
Accession: NZ_LS992166 Location: 2377788..2418682 Organism: Escherichia coli isolate Escherichia coli str. TO6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECTO6_RS11685 () | 2372861..2373166 | - | 306 | WP_134092037.1 | DUF1161 domain-containing protein | - |
| ECTO6_RS11690 () | 2373274..2373984 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| ECTO6_RS11695 () | 2373987..2374547 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| ECTO6_RS11700 () | 2374582..2374923 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| ECTO6_RS11705 () | 2375058..2375384 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| ECTO6_RS11710 () | 2375590..2376804 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| ECTO6_RS11715 () | 2376816..2377772 | + | 957 | Protein_2264 | Zn-dependent oxidoreductase | - |
| ECTO6_RS11720 () | 2377788..2378485 | - | 698 | Protein_2265 | IS1 family transposase | - |
| ECTO6_RS11735 () | 2379183..2380496 | + | 1314 | WP_134091784.1 | ISNCY family transposase ISCARN112 | Transposase |
| ECTO6_RS11740 () | 2380933..2381265 | - | 333 | WP_134091787.1 | FlxA-like family protein | - |
| ECTO6_RS11745 () | 2381468..2381773 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| ECTO6_RS11750 () | 2381798..2382037 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| ECTO6_RS11755 () | 2382037..2382324 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| ECTO6_RS11760 () | 2382396..2382551 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| ECTO6_RS11765 () | 2382768..2383019 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| ECTO6_RS11770 () | 2383086..2383364 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| ECTO6_RS11775 () | 2383366..2384415 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| ECTO6_RS11780 () | 2384429..2385181 | + | 753 | WP_001047135.1 | antitermination protein | - |
| ECTO6_RS11785 () | 2385459..2385548 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| ECTO6_RS11790 () | 2385603..2385815 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| ECTO6_RS11795 () | 2386116..2386331 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| ECTO6_RS25205 () | 2386695..2386865 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| ECTO6_RS11800 () | 2387085..2387300 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| ECTO6_RS11805 () | 2387305..2387616 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| ECTO6_RS11810 () | 2387613..2388146 | + | 534 | WP_001092971.1 | lysozyme | - |
| ECTO6_RS11815 () | 2388143..2388640 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| ECTO6_RS11820 () | 2389003..2389215 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| ECTO6_RS11825 () | 2389226..2389414 | + | 189 | WP_134092039.1 | cold-shock protein | - |
| ECTO6_RS11830 () | 2389417..2389482 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| ECTO6_RS11835 () | 2389562..2389717 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| ECTO6_RS11840 () | 2389889..2390062 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| ECTO6_RS11845 () | 2390214..2390624 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| ECTO6_RS11850 () | 2390682..2390915 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| ECTO6_RS11855 () | 2391304..2391849 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| ECTO6_RS11860 () | 2391824..2393749 | + | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| ECTO6_RS11865 () | 2393746..2393952 | + | 207 | WP_000198149.1 | gpW family protein | - |
| ECTO6_RS11870 () | 2393949..2395550 | + | 1602 | WP_021550747.1 | phage portal protein | - |
| ECTO6_RS11875 () | 2395531..2396850 | + | 1320 | WP_134091789.1 | S49 family peptidase | - |
| ECTO6_RS11880 () | 2396860..2397192 | + | 333 | WP_001556613.1 | head decoration protein | - |
| ECTO6_RS11885 () | 2397248..2398273 | + | 1026 | WP_134091791.1 | major capsid protein | - |
| ECTO6_RS11890 () | 2398315..2398713 | + | 399 | WP_000158905.1 | DNA-packaging protein FI | - |
| ECTO6_RS11895 () | 2398725..2399078 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| ECTO6_RS11900 () | 2399090..2399668 | + | 579 | WP_061091913.1 | phage tail protein | - |
| ECTO6_RS11905 () | 2399665..2400060 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| ECTO6_RS11910 () | 2400068..2400808 | + | 741 | WP_001349920.1 | phage tail protein | - |
| ECTO6_RS11915 () | 2400824..2401246 | + | 423 | WP_000479150.1 | phage minor tail protein G | - |
| ECTO6_RS11920 () | 2401228..2401662 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| ECTO6_RS11925 () | 2401655..2404216 | + | 2562 | WP_032162434.1 | phage tail tape measure protein | - |
| ECTO6_RS11930 () | 2404213..2404542 | + | 330 | WP_134091793.1 | phage tail protein | - |
| ECTO6_RS11935 () | 2404542..2405240 | + | 699 | WP_001152639.1 | phage minor tail protein L | - |
| ECTO6_RS11940 () | 2405246..2405989 | + | 744 | WP_000194780.1 | C40 family peptidase | - |
| ECTO6_RS11945 () | 2405926..2406558 | + | 633 | WP_071593509.1 | tail assembly protein | - |
| ECTO6_RS11950 () | 2406619..2410032 | + | 3414 | WP_134091795.1 | host specificity protein J | - |
| ECTO6_RS11955 () | 2410103..2410702 | + | 600 | WP_001233071.1 | Outer membrane protein X | VF |
| ECTO6_RS11960 () | 2410767..2413145 | + | 2379 | WP_086977576.1 | prophage tail fiber N-terminal domain-containing protein | - |
| ECTO6_RS11965 () | 2413145..2413426 | + | 282 | WP_001205170.1 | hypothetical protein | - |
| ECTO6_RS11970 () | 2413436..2414140 | + | 705 | WP_134091798.1 | tail fiber domain-containing protein | - |
| ECTO6_RS11975 () | 2414151..2414444 | + | 294 | WP_000355603.1 | hypothetical protein | - |
| ECTO6_RS11980 () | 2414464..2414574 | + | 111 | Protein_2316 | tail fiber assembly protein | - |
| ECTO6_RS11985 () | 2414672..2415262 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| ECTO6_RS11990 () | 2415578..2415811 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| ECTO6_RS11995 () | 2415880..2415993 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| ECTO6_RS12000 () | 2416597..2417880 | + | 1284 | Protein_2320 | MHS family MFS transporter YdfJ | - |
| ECTO6_RS12005 () | 2417985..2418682 | - | 698 | Protein_2321 | IS1 family transposase | - |
| ECTO6_RS12010 () | 2418770..2420230 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| ECTO6_RS12015 () | 2420265..2420468 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| ECTO6_RS12020 () | 2420645..2421331 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| ECTO6_RS12025 () | 2421420..2422166 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|