MGE detailed information
MGE type: IS/Tn MGE length: 1221 bp
Accession: NZ_LS483424 Location: 1365090..1366310 Organism: Bordetella parapertussis strain NCTC10520 Replicon: chromosome
Accession: NZ_LS483424 Location: 1365090..1366310 Organism: Bordetella parapertussis strain NCTC10520 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQO06_RS06380 () | 1361230..1361589 | - | 360 | WP_010928917.1 | hypothetical protein | - |
| DQO06_RS06385 () | 1361624..1362598 | - | 975 | WP_010928916.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| DQO06_RS06390 () | 1362723..1363632 | + | 910 | Protein_1255 | LysR family transcriptional regulator | - |
| DQO06_RS06395 () | 1363905..1364297 | - | 393 | WP_010928915.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| DQO06_RS06400 () | 1364359..1364541 | - | 183 | WP_010928914.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| DQO06_RS06410 () | 1365090..1366310 | - | 1221 | WP_010928912.1 | ISL3 family transposase IS1001 | Transposase |
| DQO06_RS06420 () | 1366886..1368073 | - | 1188 | WP_010928911.1 | MFS transporter | - |
| DQO06_RS06425 () | 1368291..1368968 | - | 678 | WP_010928910.1 | HAD-IA family hydrolase | - |
| DQO06_RS06430 () | 1368965..1369690 | - | 726 | WP_041937252.1 | bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | - |
| DQO06_RS06435 () | 1369817..1370398 | - | 582 | WP_003813377.1 | OmpA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|