MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 46812 bp
Accession: NZ_LS483378 Location: 124679..171490 Organism: Streptococcus sobrinus strain NCTC12279 Replicon: chromosome
Accession: NZ_LS483378 Location: 124679..171490 Organism: Streptococcus sobrinus strain NCTC12279 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM97_RS00780 () | 120773..123175 | + | 2403 | WP_028798549.1 | penicillin-binding protein PBP1B | - |
| DQM97_RS00785 () | 123409..123771 | + | 363 | WP_028798550.1 | hypothetical protein | - |
| DQM97_RS00790 () | 124231..127815 | + | 3585 | WP_019771018.1 | DNA-directed RNA polymerase subunit beta | - |
| DQM97_RS00795 () | 127936..131574 | + | 3639 | WP_019773487.1 | DNA-directed RNA polymerase subunit beta' | - |
| DQM97_RS00800 () | 131868..133532 | + | 1665 | WP_028798551.1 | peptide ABC transporter substrate-binding protein | - |
| DQM97_RS00805 () | 133638..134552 | + | 915 | WP_002960866.1 | ABC transporter permease | - |
| DQM97_RS00810 () | 134564..135595 | + | 1032 | WP_002960868.1 | ABC transporter permease | - |
| DQM97_RS00815 () | 135606..136655 | + | 1050 | WP_002960869.1 | ABC transporter ATP-binding protein | - |
| DQM97_RS00820 () | 136652..137575 | + | 924 | WP_002999065.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| DQM97_RS00825 () | 137812..139497 | - | 1686 | WP_002960871.1 | DHA2 family efflux MFS transporter permease subunit | - |
| DQM97_RS00830 () | 139629..140150 | + | 522 | WP_002960873.1 | PadR family transcriptional regulator | - |
| DQM97_RS00835 () | 140160..140468 | + | 309 | WP_002960875.1 | LlsX family protein | - |
| DQM97_RS00845 () | 140828..141358 | + | 531 | Protein_124 | DUF1211 domain-containing protein | - |
| DQM97_RS00850 () | 141425..142951 | - | 1527 | Protein_125 | IS1182 family transposase IS663 | Transposase |
| DQM97_RS10760 () | 143446..143589 | - | 144 | WP_002959475.1 | hypothetical protein | - |
| DQM97_RS00855 () | 143579..143869 | - | 291 | WP_002959477.1 | hypothetical protein | - |
| DQM97_RS00860 () | 144091..144813 | + | 723 | WP_002959479.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| DQM97_RS00865 () | 144818..145957 | + | 1140 | WP_002959481.1 | ABC transporter permease | - |
| DQM97_RS00870 () | 146181..146801 | + | 621 | WP_002959483.1 | TetR/AcrR family transcriptional regulator | - |
| DQM97_RS10835 () | 146979..147071 | - | 93 | WP_197711882.1 | type II toxin-antitoxin system YafQ family toxin | - |
| DQM97_RS00875 () | 147050..147241 | - | 192 | WP_002959484.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| DQM97_RS00880 () | 147245..147526 | - | 282 | WP_002959487.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| DQM97_RS00885 () | 147683..148549 | - | 867 | WP_002959489.1 | HTH-type transcriptional regulator HdfR | VF |
| DQM97_RS00890 () | 148660..149520 | + | 861 | WP_002959490.1 | aldo/keto reductase | - |
| DQM97_RS00895 () | 149620..149982 | - | 363 | WP_002959493.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| DQM97_RS00900 () | 150343..152727 | - | 2385 | WP_019771344.1 | HAD-IC family P-type ATPase | - |
| DQM97_RS00905 () | 152947..153315 | + | 369 | WP_019781971.1 | DUF1033 family protein | - |
| DQM97_RS00910 () | 153741..154688 | + | 948 | WP_002959503.1 | hypothetical protein | VF |
| DQM97_RS00915 () | 154651..155655 | + | 1005 | WP_029712425.1 | type II secretion system F family protein | - |
| DQM97_RS00920 () | 155652..155978 | + | 327 | WP_019770073.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| DQM97_RS00925 () | 156004..156366 | + | 363 | WP_002959508.1 | hypothetical protein | - |
| DQM97_RS00930 () | 156338..156631 | + | 294 | WP_002959510.1 | type II secretion pathway, pseudopilin PulG | - |
| DQM97_RS00935 () | 156615..157052 | + | 438 | WP_002959513.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| DQM97_RS00940 () | 157030..157491 | + | 462 | WP_002959515.1 | hypothetical protein | - |
| DQM97_RS00950 () | 157693..157959 | + | 267 | WP_002959516.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DQM97_RS00955 () | 157946..158221 | + | 276 | WP_002959518.1 | helix-turn-helix domain-containing protein | - |
| DQM97_RS00960 () | 158320..159273 | + | 954 | WP_019771347.1 | class I SAM-dependent methyltransferase | - |
| DQM97_RS00965 () | 159336..160532 | + | 1197 | WP_002959522.1 | acetate kinase | - |
| DQM97_RS00970 () | 161010..161915 | + | 906 | WP_002959524.1 | HTH-type transcriptional regulator HdfR | VF |
| DQM97_RS00975 () | 162022..162288 | + | 267 | WP_002959526.1 | ACT domain-containing protein | - |
| DQM97_RS00980 () | 162300..163637 | + | 1338 | WP_002959528.1 | PFL family protein | - |
| DQM97_RS00985 () | 163876..164175 | - | 300 | Protein_153 | hypothetical protein | - |
| DQM97_RS00990 () | 164205..165140 | - | 936 | WP_019773382.1 | IS30 family transposase ISSau1 | Transposase |
| DQM97_RS00995 () | 165331..165762 | - | 432 | WP_002961167.1 | MarR family transcriptional regulator | - |
| DQM97_RS01000 () | 165901..166602 | + | 702 | WP_002961168.1 | phosphoglycerate mutase family protein | - |
| DQM97_RS01005 () | 166589..167356 | + | 768 | WP_002961169.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| DQM97_RS01010 () | 167521..168105 | + | 585 | WP_002961170.1 | glucosaminidase domain-containing protein | - |
| DQM97_RS01015 () | 168272..169306 | + | 1035 | WP_002961171.1 | heat-inducible transcriptional repressor HrcA | - |
| DQM97_RS01020 () | 169326..169877 | + | 552 | WP_002961172.1 | nucleotide exchange factor GrpE | - |
| DQM97_RS01025 () | 170134..171969 | + | 1836 | WP_002961173.1 | molecular chaperone DnaK | - |
| DQM97_RS01030 () | 172536..173672 | + | 1137 | WP_002961174.1 | molecular chaperone DnaJ | - |
| DQM97_RS01035 () | 174072..174845 | + | 774 | WP_019777566.1 | tRNA pseudouridine(38-40) synthase TruA | - |
| DQM97_RS01040 () | 174811..175572 | + | 762 | WP_002961177.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| DQM97_RS01045 () | 175562..176032 | + | 471 | WP_002961179.1 | ECF transporter S component | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|