MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 102811 bp
Accession: NZ_LS483309 Location: 413718..516528 Organism: Staphylococcus aureus strain NCTC9944 Replicon: chromosome
Accession: NZ_LS483309 Location: 413718..516528 Organism: Staphylococcus aureus strain NCTC9944 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL96_RS01925 () | 409276..410988 | + | 1713 | WP_000683699.1 | FTR1 family protein | - |
| DQL96_RS01930 () | 411080..411523 | - | 444 | WP_111689290.1 | twin-arginine translocase subunit TatC | - |
| DQL96_RS01935 () | 411540..411764 | - | 225 | WP_001794540.1 | twin-arginine translocase TatA/TatE family subunit | - |
| DQL96_RS01940 () | 411864..412253 | - | 390 | WP_000886005.1 | DUF1398 family protein | - |
| DQL96_RS01945 () | 412494..412697 | + | 204 | WP_001246013.1 | helix-turn-helix transcriptional regulator | - |
| DQL96_RS01950 () | 412694..413407 | + | 714 | WP_000698752.1 | DUF3169 family protein | - |
| DQL96_RS01955 () | 413432..414274 | + | 843 | WP_000209565.1 | ABC transporter ATP-binding protein | - |
| DQL96_RS01960 () | 414274..414903 | + | 630 | WP_000677714.1 | ABC-2 transporter permease | - |
| DQL96_RS01965 () | 415270..416403 | - | 1134 | WP_000245685.1 | low temperature requirement protein A | - |
| DQL96_RS01970 () | 416942..418123 | + | 1182 | WP_000199070.1 | acetyl-CoA C-acetyltransferase | - |
| DQL96_RS01975 () | 418206..418958 | - | 753 | WP_000195907.1 | cyclase family protein | - |
| DQL96_RS01980 () | 419001..421229 | - | 2229 | WP_000207614.1 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase | - |
| DQL96_RS01985 () | 421226..423067 | - | 1842 | Protein_378 | bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase | - |
| DQL96_RS01990 () | 423036..424196 | - | 1161 | WP_111689291.1 | PLP-dependent aspartate aminotransferase family protein | - |
| DQL96_RS01995 () | 424193..425296 | - | 1104 | WP_000655692.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| DQL96_RS02005 () | 425960..426805 | + | 846 | WP_001550052.1 | ParB/RepB/Spo0J family partition protein | - |
| DQL96_RS02010 () | 426962..427843 | + | 882 | WP_001077602.1 | mechanosensitive ion channel family protein | - |
| DQL96_RS02015 () | 427873..428076 | + | 204 | WP_000157345.1 | DUF951 domain-containing protein | - |
| DQL96_RS02020 () | 428088..429185 | + | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| DQL96_RS02025 () | 429271..429462 | - | 192 | WP_001052483.1 | hypothetical protein | - |
| DQL96_RS02035 () | 429706..430002 | + | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| DQL96_RS02040 () | 430023..430526 | + | 504 | WP_000934798.1 | single-stranded DNA-binding protein | - |
| DQL96_RS02045 () | 430578..430820 | + | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| DQL96_RS02050 () | 431059..431958 | - | 900 | WP_001797289.1 | Abi family protein | - |
| DQL96_RS02055 () | 431960..433174 | - | 1215 | WP_000270124.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DQL96_RS02060 () | 433453..434148 | - | 696 | WP_000700229.1 | helix-turn-helix domain-containing protein | - |
| DQL96_RS02065 () | 434293..434505 | + | 213 | WP_000608987.1 | hypothetical protein | - |
| DQL96_RS02070 () | 434538..434810 | + | 273 | WP_031903009.1 | helix-turn-helix domain-containing protein | - |
| DQL96_RS02075 () | 434822..434968 | + | 147 | WP_000784873.1 | hypothetical protein | - |
| DQL96_RS02080 () | 434961..435170 | + | 210 | WP_001058490.1 | hypothetical protein | Antitoxin Detail |
| DQL96_RS02085 () | 435173..435502 | + | 330 | WP_111689292.1 | DUF1474 family protein | Toxin Detail |
| DQL96_RS02090 () | 435566..436435 | + | 870 | WP_111689293.1 | primase alpha helix C-terminal domain-containing protein | - |
| DQL96_RS02095 () | 436452..437921 | + | 1470 | WP_053040304.1 | virulence-associated E family protein | - |
| DQL96_RS02100 () | 438200..438562 | + | 363 | WP_001039168.1 | hypothetical protein | - |
| DQL96_RS02105 () | 438564..438848 | + | 285 | WP_000998181.1 | hypothetical protein | - |
| DQL96_RS02110 () | 438845..439486 | + | 642 | WP_033863175.1 | pathogenicity island protein | - |
| DQL96_RS02115 () | 440023..440364 | + | 342 | WP_111689294.1 | pathogenicity island protein | - |
| DQL96_RS02120 () | 440395..441048 | + | 654 | WP_000214171.1 | hypothetical protein | - |
| DQL96_RS02125 () | 441101..441628 | + | 528 | WP_000771364.1 | spore coat protein | - |
| DQL96_RS02130 () | 441760..441972 | + | 213 | WP_025174984.1 | hypothetical protein | - |
| DQL96_RS02135 () | 441969..442538 | + | 570 | WP_001293066.1 | terminase small subunit | - |
| DQL96_RS02140 () | 442967..443485 | + | 519 | WP_000624990.1 | hypothetical protein | - |
| DQL96_RS02145 () | 443482..443910 | + | 429 | WP_000591858.1 | hypothetical protein | - |
| DQL96_RS02150 () | 443897..444676 | + | 780 | WP_000705255.1 | hypothetical protein | - |
| DQL96_RS02155 () | 444856..445140 | + | 285 | WP_001196958.1 | DUF3102 domain-containing protein | - |
| DQL96_RS02160 () | 446193..447131 | - | 939 | WP_001822249.1 | Abi family protein | - |
| DQL96_RS15605 () | 447170..447877 | - | 708 | Protein_412 | tyrosine-type recombinase/integrase | - |
| DQL96_RS02175 () | 448077..448688 | + | 612 | WP_000475326.1 | toxin | - |
| DQL96_RS02180 () | 449057..449425 | + | 369 | WP_000849177.1 | YxeA family protein | - |
| DQL96_RS02185 () | 449606..450178 | + | 573 | WP_000769720.1 | PepSY domain-containing protein | - |
| DQL96_RS02190 () | 450316..450579 | - | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| DQL96_RS02195 () | 450879..451130 | + | 252 | WP_000466748.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| DQL96_RS02200 () | 451169..451378 | - | 210 | WP_000211676.1 | hypothetical protein | - |
| DQL96_RS02205 () | 451556..452137 | + | 582 | WP_000158374.1 | phosphoglycerate mutase family protein | - |
| DQL96_RS02210 () | 452203..452586 | - | 384 | WP_000868248.1 | hypothetical protein | - |
| DQL96_RS02215 () | 452841..453467 | - | 627 | WP_000746687.1 | NDxxF motif lipoprotein | - |
| DQL96_RS02220 () | 453540..453782 | - | 243 | Protein_422 | hypothetical protein | - |
| DQL96_RS02225 () | 453912..455435 | - | 1524 | WP_000930486.1 | alkyl hydroperoxide reductase subunit F | - |
| DQL96_RS02230 () | 455451..456020 | - | 570 | WP_000052781.1 | peroxiredoxin | - |
| DQL96_RS02235 () | 456512..457267 | + | 756 | WP_001289311.1 | NADPH-dependent oxidoreductase | - |
| DQL96_RS02240 () | 457348..458736 | - | 1389 | WP_000991007.1 | L-cystine transporter | - |
| DQL96_RS02245 () | 458821..458922 | + | 102 | WP_001789518.1 | hypothetical protein | - |
| DQL96_RS02255 () | 459713..460669 | - | 957 | WP_000956132.1 | hypothetical protein | - |
| DQL96_RS02260 () | 460787..461449 | - | 663 | WP_000394698.1 | hypothetical protein | - |
| DQL96_RS02265 () | 461592..461999 | - | 408 | WP_000763768.1 | general stress protein | - |
| DQL96_RS02270 () | 462512..463090 | + | 579 | WP_000421410.1 | xanthine phosphoribosyltransferase | - |
| DQL96_RS02275 () | 463090..464358 | + | 1269 | WP_000793009.1 | purine permease | - |
| DQL96_RS02280 () | 464396..465862 | + | 1467 | WP_000264071.1 | IMP dehydrogenase | - |
| DQL96_RS02285 () | 465887..467428 | + | 1542 | WP_000424966.1 | glutamine-hydrolyzing GMP synthase | - |
| DQL96_RS02290 () | 467496..468689 | - | 1194 | WP_000237797.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DQL96_RS02295 () | 468716..468916 | - | 201 | WP_000633907.1 | DUF3173 family protein | - |
| DQL96_RS02305 () | 469414..469644 | - | 231 | WP_000845143.1 | helix-turn-helix domain-containing protein | - |
| DQL96_RS02310 () | 469641..470063 | - | 423 | WP_000804879.1 | sigma-70 family RNA polymerase sigma factor | - |
| DQL96_RS15610 () | 470020..470207 | - | 188 | Protein_439 | hypothetical protein | - |
| DQL96_RS02320 () | 470594..470947 | + | 354 | WP_001227350.1 | helix-turn-helix domain-containing protein | - |
| DQL96_RS02325 () | 471005..471172 | - | 168 | WP_001803271.1 | cysteine-rich KTR domain-containing protein | - |
| DQL96_RS02330 () | 471291..473210 | - | 1920 | WP_000691737.1 | tetracycline resistance ribosomal protection protein Tet(M) | VF |
| DQL96_RS02335 () | 473226..473342 | - | 117 | WP_001791010.1 | tetracycline resistance determinant leader peptide | - |
| DQL96_RS02345 () | 473587..474516 | - | 930 | WP_000584387.1 | conjugal transfer protein | - |
| DQL96_RS02350 () | 474533..475555 | - | 1023 | WP_000768373.1 | hypothetical protein | VF |
| DQL96_RS02355 () | 475552..477579 | - | 2028 | WP_000192392.1 | membrane protein | - |
| DQL96_RS02360 () | 477576..480029 | - | 2454 | WP_000331168.1 | ATP-binding protein | - |
| DQL96_RS02365 () | 480013..480408 | - | 396 | WP_000723887.1 | conjugal transfer protein | - |
| DQL96_RS02370 () | 480480..481109 | - | 630 | WP_000273483.1 | hypothetical protein | - |
| DQL96_RS02375 () | 481138..481866 | - | 729 | WP_001071399.1 | IS21 family transposase ISCth9 | Transposase |
| DQL96_RS02380 () | 481866..483293 | - | 1428 | WP_111689295.1 | IS21 family transposase ISKol3 | Transposase |
| DQL96_RS02385 () | 483561..484055 | - | 495 | WP_000870467.1 | antirestriction protein ArdA | - |
| DQL96_RS02390 () | 484122..484901 | - | 780 | WP_000675717.1 | abortive infection family protein | - |
| DQL96_RS02395 () | 484943..485164 | - | 222 | WP_001009054.1 | hypothetical protein | - |
| DQL96_RS02400 () | 485161..485451 | - | 291 | WP_000055376.1 | hypothetical protein | - |
| DQL96_RS02405 () | 485448..486632 | - | 1185 | WP_000426689.1 | replication initiation factor domain-containing protein | - |
| DQL96_RS02410 () | 486814..488217 | - | 1404 | WP_001130245.1 | DUF87 domain-containing protein | - |
| DQL96_RS02415 () | 488239..489012 | - | 774 | WP_000185761.1 | hypothetical protein | - |
| DQL96_RS02420 () | 489022..489399 | - | 378 | WP_001234191.1 | YdcP family protein | - |
| DQL96_RS02425 () | 489420..489734 | - | 315 | WP_000421279.1 | YdcP family protein | - |
| DQL96_RS02430 () | 489934..491727 | - | 1794 | WP_000181735.1 | ATP-dependent helicase | - |
| DQL96_RS02435 () | 491724..493913 | - | 2190 | WP_000470931.1 | AAA family ATPase | - |
| DQL96_RS02440 () | 494047..495244 | - | 1198 | Protein_463 | IS256 family transposase ISLgar5 | Transposase |
| DQL96_RS02450 () | 495738..496274 | - | 537 | WP_000551776.1 | hypothetical protein | - |
| DQL96_RS02455 () | 496667..497371 | - | 705 | WP_000041883.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| DQL96_RS02460 () | 497770..498042 | - | 273 | WP_000159787.1 | IS3 family transposase IS655 | Transposase |
| DQL96_RS02470 () | 498303..498455 | - | 153 | WP_000248839.1 | hypothetical protein | - |
| DQL96_RS02475 () | 498979..499338 | - | 360 | WP_001021622.1 | DUF1304 domain-containing protein | - |
| DQL96_RS02480 () | 499357..500202 | - | 846 | WP_001024377.1 | SDR family oxidoreductase | - |
| DQL96_RS02485 () | 500674..501354 | + | 681 | WP_000669005.1 | Staphylococcal superantigen-like 1 | VF |
| DQL96_RS02490 () | 501640..502335 | + | 696 | WP_000782618.1 | superantigen-like protein SSL2 | - |
| DQL96_RS02495 () | 502626..503684 | + | 1059 | Protein_472 | Staphylococcal superantigen-like 3 | VF |
| DQL96_RS02500 () | 503803..503940 | + | 138 | WP_001791691.1 | hypothetical protein | - |
| DQL96_RS02505 () | 504049..504975 | + | 927 | WP_000705644.1 | superantigen-like protein SSL4 | - |
| DQL96_RS02510 () | 505339..506043 | + | 705 | WP_000784244.1 | superantigen-like protein SSL5 | - |
| DQL96_RS02515 () | 506489..507184 | + | 696 | WP_000769845.1 | superantigen-like protein SSL6 | - |
| DQL96_RS02520 () | 507606..508301 | + | 696 | WP_000769836.1 | Staphylococcal superantigen-like 7 | VF |
| DQL96_RS02525 () | 508645..509343 | + | 699 | WP_000673479.1 | Staphylococcal superantigen-like 7 | VF |
| DQL96_RS02530 () | 509723..510421 | + | 699 | WP_000779446.1 | Staphylococcal superantigen-like 7 | VF |
| DQL96_RS02535 () | 510787..511471 | + | 685 | Protein_480 | superantigen-like protein SSL10 | - |
| DQL96_RS02540 () | 511556..511657 | - | 102 | WP_010956543.1 | hypothetical protein | - |
| DQL96_RS02545 () | 511735..513291 | + | 1557 | WP_000028628.1 | type I restriction-modification system subunit M | - |
| DQL96_RS02550 () | 513284..514495 | + | 1212 | WP_000072584.1 | restriction endonuclease subunit S | - |
| DQL96_RS02555 () | 514878..515555 | + | 678 | WP_000769163.1 | superantigen-like protein SSL11 | - |
| DQL96_RS02560 () | 515577..517085 | + | 1509 | WP_001208912.1 | FKLRK protein | - |
| DQL96_RS02565 () | 517189..517497 | - | 309 | WP_000669519.1 | myeloperoxidase inhibitor SPIN | - |
| DQL96_RS02570 () | 517865..518653 | + | 789 | WP_052995938.1 | tandem-type lipoprotein | - |
| DQL96_RS02575 () | 518672..519479 | + | 808 | Protein_488 | tandem-type lipoprotein | - |
| DQL96_RS02580 () | 519528..520328 | + | 801 | WP_001801841.1 | tandem-type lipoprotein Lpl4 | - |
| DQL96_RS02585 () | 520347..521117 | + | 771 | WP_000835991.1 | tandem-type lipoprotein Lpl5 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|