MGE detailed information
MGE type: Prophage MGE length: 16444 bp
Accession: NZ_LS483303 Location: 754708..771151 Organism: Escherichia coli strain NCTC9967 Replicon: chromosome
Accession: NZ_LS483303 Location: 754708..771151 Organism: Escherichia coli strain NCTC9967 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM88_RS03920 () | 751367..753049 | + | 1683 | WP_000259302.1 | glycolate permease GlcA | - |
| DQM88_RS03930 () | 753535..754701 | + | 1167 | Protein_710 | Accessory colonization factor AcfD | - |
| DQM88_RS03935 () | 754708..755556 | - | 849 | Protein_711 | IS3 family transposase ISEc31 | Transposase |
| DQM88_RS03940 () | 755896..756633 | + | 738 | WP_094318861.1 | porin family protein | - |
| DQM88_RS03945 () | 757053..757412 | + | 360 | Protein_713 | WYL domain-containing protein | - |
| DQM88_RS03955 () | 757561..758208 | - | 648 | Protein_714 | IS5 family transposase ISKpn26 | Transposase |
| DQM88_RS03965 () | 759457..760029 | + | 573 | Protein_716 | IS3 family transposase IS2 | Transposase |
| DQM88_RS03970 () | 760167..760715 | + | 549 | WP_076486551.1 | fimbrial protein YehD | - |
| DQM88_RS03975 () | 760771..761451 | + | 681 | WP_053270475.1 | putative fimbrial chaperone YehC | VF |
| DQM88_RS03980 () | 761469..763955 | + | 2487 | WP_111738583.1 | Outer membrane usher protein YehB | VF |
| DQM88_RS03985 () | 763966..764976 | + | 1011 | WP_089615833.1 | fimbrial protein | - |
| DQM88_RS03990 () | 765161..765382 | + | 222 | WP_001603498.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DQM88_RS03995 () | 765382..765759 | + | 378 | WP_053270478.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| DQM88_RS04005 () | 765869..766084 | - | 216 | Protein_723 | IS3 family transposase IS911 | Transposase |
| DQM88_RS04015 () | 766270..767532 | - | 1263 | WP_089634553.1 | Prophage integrase IntS ; Integrase | Integrase |
| DQM88_RS04025 () | 767911..768618 | - | 708 | WP_000234514.1 | DUF554 domain-containing protein | - |
| DQM88_RS24130 () | 768771..768854 | + | 84 | WP_211180506.1 | protein YqgH | - |
| DQM88_RS04035 () | 769016..771151 | + | 2136 | WP_001326492.1 | ornithine decarboxylase | - |
| DQM88_RS04040 () | 771201..772457 | - | 1257 | WP_094318677.1 | nucleoside permease NupG | - |
| DQM88_RS04045 () | 772659..773738 | - | 1080 | WP_001298916.1 | membrane-bound lytic murein transglycosylase MltC | - |
| DQM88_RS04050 () | 773803..774078 | - | 276 | WP_000091700.1 | oxidative damage protection protein | - |
| DQM88_RS04055 () | 774106..775158 | - | 1053 | WP_001321419.1 | A/G-specific adenine glycosylase | - |
| DQM88_RS04065 () | 775319..776038 | + | 720 | WP_000786911.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|