MGE detailed information
MGE type: Genomic_island MGE length: 41510 bp
Accession: NZ_LS483303 Location: 3531067..3572576 Organism: Escherichia coli strain NCTC9967 Replicon: chromosome
Accession: NZ_LS483303 Location: 3531067..3572576 Organism: Escherichia coli strain NCTC9967 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM88_RS18100 () | 3526783..3527451 | + | 669 | WP_001209100.1 | hypothetical protein | - |
| DQM88_RS18115 () | 3527694..3528389 | - | 696 | WP_000370307.1 | lactate utilization protein C | - |
| DQM88_RS18120 () | 3528382..3529809 | - | 1428 | WP_000023927.1 | iron-sulfur cluster-binding protein | - |
| DQM88_RS18125 () | 3529820..3530539 | - | 720 | WP_001102100.1 | (Fe-S)-binding protein | - |
| DQM88_RS18130 () | 3531067..3531921 | - | 855 | WP_000339601.1 | DNA-binding transcriptional regulator RclR | - |
| DQM88_RS18135 () | 3532147..3533472 | + | 1326 | WP_001046293.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| DQM88_RS18140 () | 3533581..3533817 | + | 237 | WP_000474077.1 | DUF1471 domain-containing protein | - |
| DQM88_RS18145 () | 3533829..3534422 | + | 594 | WP_001306921.1 | reactive chlorine species resistance protein RclC | - |
| DQM88_RS23940 () | 3534581..3534709 | - | 129 | Protein_3304 | aldo/keto reductase | - |
| DQM88_RS18150 () | 3535012..3535863 | + | 852 | WP_000621009.1 | Right origin-binding protein | VF |
| DQM88_RS18155 () | 3536003..3540259 | - | 4257 | WP_073464891.1 | hypothetical protein | VF |
| DQM88_RS18165 () | 3541374..3541475 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| DQM88_RS18175 () | 3541839..3542102 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| DQM88_RS18180 () | 3542102..3542242 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| DQM88_RS18185 () | 3542277..3542504 | - | 228 | WP_001147279.1 | hypothetical protein | - |
| DQM88_RS18195 () | 3543327..3543869 | + | 543 | WP_001301257.1 | HTH-type transcriptional regulator EcpR | VF |
| DQM88_RS18200 () | 3543944..3544531 | + | 588 | WP_000730972.1 | Common pilus major fimbrillin subunit EcpA | VF |
| DQM88_RS18205 () | 3544589..3545257 | + | 669 | WP_000716398.1 | putative fimbrial chaperone EcpB | VF |
| DQM88_RS18210 () | 3545283..3547808 | + | 2526 | WP_001131091.1 | putative outer membrane usher protein EcpC | VF |
| DQM88_RS18215 () | 3547798..3549441 | + | 1644 | WP_094318714.1 | Fimbria adhesin EcpD | VF |
| DQM88_RS18220 () | 3549410..3550120 | + | 711 | WP_001301243.1 | putative fimbrial chaperone EcpE | VF |
| DQM88_RS18225 () | 3550433..3550762 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| DQM88_RS18235 () | 3551010..3551624 | - | 615 | WP_001019920.1 | YagU family protein | - |
| DQM88_RS18245 () | 3552042..3552731 | + | 690 | WP_001543517.1 | aldehyde dehydrogenase iron-sulfur subunit | - |
| DQM88_RS18250 () | 3552728..3553684 | + | 957 | WP_000643332.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| DQM88_RS18255 () | 3553681..3555879 | + | 2199 | Protein_3321 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| DQM88_RS18260 () | 3555889..3556845 | + | 957 | WP_073464899.1 | molybdenum cofactor insertion chaperone PaoD | - |
| DQM88_RS18265 () | 3556896..3557234 | + | 339 | Protein_3323 | LysR family transcriptional regulator | - |
| DQM88_RS18270 () | 3557608..3557970 | + | 363 | WP_000915848.1 | GtrA family protein | - |
| DQM88_RS18275 () | 3557967..3558881 | + | 915 | WP_089592798.1 | Prophage bactoprenol glucosyl transferase | VF |
| DQM88_RS18280 () | 3558883..3560196 | + | 1314 | WP_089592799.1 | hypothetical protein | - |
| DQM88_RS18285 () | 3560233..3560712 | - | 480 | WP_000171493.1 | hypothetical protein | - |
| DQM88_RS18290 () | 3560871..3561020 | + | 150 | Protein_3328 | IS3 family transposase ISEhe3 | Transposase |
| DQM88_RS18300 () | 3561125..3562272 | + | 1148 | WP_111738649.1 | IS3 family transposase ISEc52 | Transposase |
| DQM88_RS23945 () | 3562304..3562468 | + | 165 | Protein_3330 | integrase | - |
| DQM88_RS18310 () | 3562673..3563926 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| DQM88_RS18315 () | 3563938..3565041 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| DQM88_RS18320 () | 3565329..3566384 | + | 1056 | WP_089570107.1 | phosphoporin PhoE | - |
| DQM88_RS18325 () | 3566423..3566824 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| DQM88_RS18330 () | 3566882..3568126 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3567542..3567622 | - | 81 | NuclAT_10 | - | - |
| - () | 3567542..3567622 | - | 81 | NuclAT_10 | - | - |
| - () | 3567542..3567622 | - | 81 | NuclAT_10 | - | - |
| - () | 3567542..3567622 | - | 81 | NuclAT_10 | - | - |
| DQM88_RS18335 () | 3568218..3568676 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| DQM88_RS18340 () | 3568937..3570394 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| DQM88_RS18345 () | 3570451..3570972 | - | 522 | Protein_3338 | peptide chain release factor H | - |
| DQM88_RS18350 () | 3570971..3571174 | - | 204 | Protein_3339 | RNA ligase RtcB family protein | - |
| DQM88_RS18355 () | 3571420..3571872 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| DQM88_RS18360 () | 3571882..3572280 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| DQM88_RS18365 () | 3572283..3572576 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| DQM88_RS18370 () | 3572628..3573683 | - | 1056 | WP_094318827.1 | DNA polymerase IV | - |
| DQM88_RS18375 () | 3573754..3574677 | - | 924 | WP_001232547.1 | putative lateral flagellar export/assembly protein LafU | - |
| DQM88_RS18380 () | 3574680..3575543 | - | 864 | WP_094318826.1 | flagellar motor stator protein MotA | - |
| DQM88_RS18385 () | 3575556..3576272 | - | 717 | WP_000938723.1 | FliA/WhiG family RNA polymerase sigma factor | - |
| DQM88_RS18390 () | 3576292..3576759 | - | 468 | WP_000725257.1 | flagellar basal body-associated FliL family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|