MGE detailed information
MGE type: Genomic_island MGE length: 40834 bp
Accession: NZ_LS483296 Location: 1135533..1176366 Organism: Escherichia coli strain NCTC9966 Replicon: chromosome
Accession: NZ_LS483296 Location: 1135533..1176366 Organism: Escherichia coli strain NCTC9966 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM96_RS05835 () | 1131012..1132280 | - | 1269 | WP_111724570.1 | L-2-hydroxyglutarate oxidase | - |
| DQM96_RS05840 () | 1132299..1133276 | - | 978 | WP_001315804.1 | carbon starvation induced protein CsiD | - |
| DQM96_RS05845 () | 1133613..1135865 | - | 2253 | Protein_1073 | alpha-amylase family protein | - |
| DQM96_RS05855 () | 1137250..1138623 | + | 1374 | Protein_1074 | DUF5507 domain-containing protein | - |
| DQM96_RS05865 () | 1139052..1139195 | + | 144 | WP_000264671.1 | hypothetical protein | - |
| DQM96_RS24620 () | 1139350..1139469 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| DQM96_RS05875 () | 1139534..1144114 | + | 4581 | WP_111724795.1 | putative autotransporter | VF |
| DQM96_RS05880 () | 1144478..1144807 | - | 330 | WP_001618791.1 | TA system toxin CbtA family protein | Toxin Detail |
| DQM96_RS05885 () | 1144828..1145145 | - | 318 | WP_001618790.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| DQM96_RS05890 () | 1145164..1145385 | - | 222 | WP_044864853.1 | DUF987 domain-containing protein | - |
| DQM96_RS05895 () | 1145394..1145870 | - | 477 | WP_000811693.1 | RadC family protein | - |
| DQM96_RS05900 () | 1145886..1146344 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| DQM96_RS05905 () | 1146442..1146681 | - | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| DQM96_RS05910 () | 1146758..1147225 | - | 468 | WP_001547765.1 | hypothetical protein | - |
| DQM96_RS05915 () | 1147248..1147691 | - | 444 | WP_032199444.1 | hypothetical protein | - |
| DQM96_RS05920 () | 1147691..1147927 | - | 237 | WP_001144031.1 | hypothetical protein | - |
| DQM96_RS05925 () | 1147968..1148669 | - | 702 | WP_111724571.1 | WYL domain-containing protein | - |
| DQM96_RS05930 () | 1148886..1149707 | - | 822 | WP_111724572.1 | DUF945 domain-containing protein | - |
| DQM96_RS05935 () | 1149799..1150662 | - | 864 | WP_001581464.1 | GTPase family protein | - |
| DQM96_RS05940 () | 1150866..1151057 | + | 192 | WP_001581465.1 | IS5 family transposase ISSgl1 | Transposase |
| DQM96_RS05945 () | 1151106..1151795 | - | 690 | Protein_1091 | IS1 family transposase | - |
| DQM96_RS05955 () | 1152053..1153606 | - | 1554 | WP_111724573.1 | L-lactate permease | - |
| DQM96_RS05960 () | 1153994..1155739 | + | 1746 | WP_023157191.1 | D-lactate dehydrogenase | - |
| DQM96_RS05965 () | 1155814..1156533 | + | 720 | WP_001102105.1 | (Fe-S)-binding protein | - |
| DQM96_RS05970 () | 1156544..1157971 | + | 1428 | WP_000023896.1 | iron-sulfur cluster-binding protein | - |
| DQM96_RS05975 () | 1157964..1158659 | + | 696 | WP_000370411.1 | lactate utilization protein C | - |
| DQM96_RS05980 () | 1158709..1159122 | - | 414 | Protein_1097 | gluconate permease | - |
| DQM96_RS05985 () | 1159372..1160352 | + | 981 | WP_111724574.1 | IS5 family transposase ISKpn26 | Transposase |
| DQM96_RS05990 () | 1160502..1160735 | - | 234 | Protein_1099 | dihydrodipicolinate synthase family protein | - |
| DQM96_RS05995 () | 1160756..1161451 | - | 696 | WP_111724575.1 | B3/4 domain-containing protein | - |
| DQM96_RS06000 () | 1161495..1162097 | + | 603 | WP_001581470.1 | helix-turn-helix domain-containing protein | - |
| DQM96_RS06005 () | 1162160..1162621 | + | 462 | WP_019077728.1 | GNAT family N-acetyltransferase | - |
| DQM96_RS06010 () | 1162890..1164599 | + | 1710 | WP_045269866.1 | type I restriction-modification system subunit M | - |
| DQM96_RS06015 () | 1164589..1166034 | + | 1446 | WP_111724576.1 | restriction endonuclease subunit S | - |
| DQM96_RS06020 () | 1166027..1167214 | + | 1188 | WP_111724577.1 | DUF4268 domain-containing protein | - |
| DQM96_RS06025 () | 1167214..1170345 | + | 3132 | WP_032180906.1 | type I restriction endonuclease subunit R | - |
| DQM96_RS06030 () | 1170380..1170874 | + | 495 | WP_006809979.1 | hypothetical protein | - |
| DQM96_RS06035 () | 1170947..1171573 | - | 627 | WP_001618771.1 | inovirus Gp2 family protein | - |
| DQM96_RS06040 () | 1171704..1173118 | - | 1415 | Protein_1109 | DUF3987 domain-containing protein | - |
| DQM96_RS06045 () | 1173245..1173457 | - | 213 | WP_001618769.1 | AlpA family transcriptional regulator | - |
| DQM96_RS06050 () | 1173583..1174461 | + | 879 | WP_111724578.1 | hypothetical protein | - |
| DQM96_RS06055 () | 1174520..1175761 | - | 1242 | WP_001515695.1 | Prophage integrase IntA ; Integrase | Integrase |
| DQM96_RS06065 () | 1176542..1177024 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| DQM96_RS06070 () | 1177195..1177632 | + | 438 | WP_001341638.1 | type II toxin-antitoxin system toxin RatA | - |
| DQM96_RS06075 () | 1177622..1177912 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| DQM96_RS06080 () | 1177974..1178315 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| DQM96_RS06085 () | 1178464..1180125 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| DQM96_RS06090 () | 1180211..1181089 | - | 879 | WP_032083618.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|