MGE detailed information
MGE type: Prophage MGE length: 50919 bp
Accession: NZ_LR898874 Location: 4052229..4103147 Organism: Escherichia coli isolate MSB1_4I-sc-2280412 Replicon: chromosome
Accession: NZ_LR898874 Location: 4052229..4103147 Organism: Escherichia coli isolate MSB1_4I-sc-2280412 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMX41_RS20215 () | 4050331..4051182 | + | 852 | WP_001174466.1 | aldo/keto reductase | - |
| JMX41_RS20220 () | 4051209..4052198 | + | 990 | WP_001172288.1 | aldo/keto reductase | - |
| JMX41_RS20225 () | 4052229..4053122 | - | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| JMX41_RS20230 () | 4053288..4053985 | - | 698 | Protein_3966 | IS1 family transposase IS1G | Transposase |
| JMX41_RS20235 () | 4054050..4056155 | + | 2106 | WP_001570980.1 | hypothetical protein | - |
| JMX41_RS20240 () | 4056175..4056789 | - | 615 | WP_001570981.1 | hypothetical protein | - |
| JMX41_RS20245 () | 4057311..4057532 | - | 222 | WP_000678608.1 | hypothetical protein | - |
| JMX41_RS20250 () | 4057612..4058067 | - | 456 | WP_000230715.1 | hypothetical protein | - |
| JMX41_RS20255 () | 4058336..4058617 | + | 282 | WP_000617443.1 | PerC family transcriptional regulator | - |
| JMX41_RS20260 () | 4059221..4059763 | + | 543 | WP_000284450.1 | plasmid pRiA4b ORF-3 family protein | - |
| JMX41_RS20265 () | 4059756..4060115 | - | 360 | WP_001350215.1 | hypothetical protein | - |
| JMX41_RS20270 () | 4060938..4061096 | + | 159 | WP_001570982.1 | hypothetical protein | - |
| JMX41_RS20280 () | 4064038..4064979 | + | 942 | Protein_3976 | hypothetical protein | - |
| JMX41_RS20285 () | 4065014..4065727 | + | 714 | WP_000179449.1 | hypothetical protein | - |
| JMX41_RS20290 () | 4065809..4067086 | - | 1278 | WP_024190322.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JMX41_RS20295 () | 4067441..4067626 | + | 186 | WP_000146241.1 | hypothetical protein | - |
| JMX41_RS20300 () | 4067841..4068455 | + | 615 | WP_001019920.1 | YagU family protein | - |
| JMX41_RS20305 () | 4068704..4069033 | - | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| JMX41_RS20310 () | 4069346..4070056 | - | 711 | WP_016234627.1 | putative fimbrial chaperone EcpE | VF |
| JMX41_RS20315 () | 4070025..4071668 | - | 1644 | WP_001265647.1 | Fimbria adhesin EcpD | VF |
| JMX41_RS20320 () | 4071658..4073940 | - | 2283 | Protein_3984 | putative outer membrane usher protein EcpC | VF |
| JMX41_RS20325 () | 4073997..4074694 | + | 698 | Protein_3985 | IS1 family transposase IS1R | Transposase |
| JMX41_RS20330 () | 4075386..4075576 | + | 191 | Protein_3986 | hypothetical protein | - |
| JMX41_RS20335 () | 4075646..4075786 | - | 141 | WP_001329485.1 | type B 50S ribosomal protein L36 | - |
| JMX41_RS20340 () | 4075786..4076049 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| JMX41_RS20345 () | 4076413..4076514 | - | 102 | WP_000662258.1 | hypothetical protein | - |
| JMX41_RS20350 () | 4076983..4077225 | - | 243 | WP_001329483.1 | hypothetical protein | - |
| JMX41_RS20355 () | 4077499..4078196 | + | 698 | Protein_3991 | IS1 family transposase IS1R | Transposase |
| JMX41_RS20360 () | 4078211..4079625 | - | 1415 | Protein_3992 | phage DNA ejection protein | - |
| JMX41_RS20365 () | 4079625..4080302 | - | 678 | WP_001570978.1 | hypothetical protein | - |
| JMX41_RS20370 () | 4080296..4080757 | - | 462 | WP_000420674.1 | DUF2824 family protein | - |
| JMX41_RS20375 () | 4080774..4080935 | - | 162 | WP_001018524.1 | hypothetical protein | - |
| JMX41_RS20380 () | 4081511..4084267 | - | 2757 | WP_001570977.1 | TOPRIM and DUF927 domain-containing protein | - |
| JMX41_RS20385 () | 4084254..4084625 | - | 372 | WP_001208878.1 | hypothetical protein | - |
| JMX41_RS20390 () | 4084618..4084959 | - | 342 | WP_000628967.1 | hypothetical protein | - |
| JMX41_RS20395 () | 4084970..4085572 | - | 603 | WP_001058743.1 | hypothetical protein | - |
| JMX41_RS20400 () | 4085565..4085786 | - | 222 | WP_000181940.1 | hypothetical protein | - |
| JMX41_RS20405 () | 4085783..4086046 | - | 264 | WP_201555518.1 | nicotinic acetylcholine receptor subunit beta | - |
| JMX41_RS20410 () | 4086043..4086237 | - | 195 | WP_001065738.1 | hypothetical protein | - |
| JMX41_RS20415 () | 4086230..4087297 | - | 1068 | WP_021563224.1 | ash family protein | - |
| JMX41_RS20420 () | 4087291..4087473 | - | 183 | WP_000476150.1 | DUF4222 domain-containing protein | - |
| JMX41_RS20425 () | 4087466..4088299 | - | 834 | WP_001570974.1 | antA/AntB antirepressor family protein | - |
| JMX41_RS20430 () | 4088312..4088743 | - | 432 | WP_000412539.1 | hypothetical protein | - |
| JMX41_RS20435 () | 4088743..4088946 | - | 204 | WP_000035054.1 | AlpA family transcriptional regulator | - |
| JMX41_RS20440 () | 4088994..4089173 | + | 180 | Protein_4008 | excinuclease ABC subunit B | - |
| JMX41_RS20445 () | 4089598..4090812 | - | 1215 | WP_201555520.1 | Prophage integrase IntS ; Integrase | Integrase |
| JMX41_RS20455 () | 4091168..4092421 | - | 1254 | WP_000893288.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JMX41_RS20460 () | 4092433..4093536 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JMX41_RS20465 () | 4093824..4094879 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| JMX41_RS20470 () | 4094918..4095319 | - | 402 | WP_000174675.1 | sigma factor-binding protein Crl | - |
| JMX41_RS20475 () | 4095377..4096621 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 4096037..4096117 | - | 81 | NuclAT_9 | - | - |
| - () | 4096037..4096117 | - | 81 | NuclAT_9 | - | - |
| - () | 4096037..4096117 | - | 81 | NuclAT_9 | - | - |
| - () | 4096037..4096117 | - | 81 | NuclAT_9 | - | - |
| JMX41_RS20480 () | 4096713..4097171 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JMX41_RS20485 () | 4097432..4098889 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| JMX41_RS20490 () | 4098946..4099560 | - | 615 | WP_000602125.1 | peptide chain release factor H | - |
| JMX41_RS20495 () | 4099557..4100693 | - | 1137 | WP_021563227.1 | RNA ligase RtcB family protein | - |
| JMX41_RS20500 () | 4100884..4101336 | - | 453 | WP_001059882.1 | GNAT family N-acetyltransferase | - |
| JMX41_RS20505 () | 4101346..4101744 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JMX41_RS20510 () | 4101747..4102040 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JMX41_RS20515 () | 4102092..4103147 | - | 1056 | WP_001226154.1 | DNA polymerase IV | - |
| JMX41_RS20520 () | 4103218..4104141 | - | 924 | WP_001570971.1 | putative lateral flagellar export/assembly protein LafU | - |
| JMX41_RS20525 () | 4104144..4105007 | - | 864 | WP_001169516.1 | flagellar motor stator protein MotA | - |
| JMX41_RS20530 () | 4105020..4105739 | - | 720 | WP_000938736.1 | FliA/WhiG family RNA polymerase sigma factor | - |
| JMX41_RS20535 () | 4105759..4106226 | - | 468 | WP_000725257.1 | flagellar basal body-associated FliL family protein | - |
| JMX41_RS20540 () | 4106234..4107322 | - | 1089 | WP_001067483.1 | flagellar hook-length control protein FliK | - |
| JMX41_RS20545 () | 4107319..4107630 | - | 312 | WP_000415004.1 | hypothetical protein | - |
| JMX41_RS20550 () | 4107635..4108027 | - | 393 | WP_000285323.1 | flagellar export chaperone FliS | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|