MGE detailed information
MGE type: Genomic_island MGE length: 47805 bp
Accession: NZ_LR898868 Location: 3531668..3579472 Organism: Escherichia coli isolate MSB1_1D-sc-2280324 Replicon: chromosome
Accession: NZ_LR898868 Location: 3531668..3579472 Organism: Escherichia coli isolate MSB1_1D-sc-2280324 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMX26_RS17065 () | 3526882..3528429 | - | 1548 | WP_000111836.1 | acyl-CoA synthetase FdrA | - |
| JMX26_RS17070 () | 3528419..3529282 | - | 864 | WP_130053381.1 | DUF2877 domain-containing protein | - |
| JMX26_RS17075 () | 3529322..3529927 | - | 606 | WP_000023635.1 | ankyrin repeat domain-containing protein | - |
| JMX26_RS17080 () | 3530185..3530682 | + | 498 | WP_001013892.1 | DUF1097 domain-containing protein | - |
| JMX26_RS17085 () | 3530732..3531429 | - | 698 | Protein_3340 | IS1 family transposase | - |
| JMX26_RS17090 () | 3531668..3532777 | + | 1110 | Protein_3341 | IS4 family transposase IS10R | Transposase |
| JMX26_RS17095 () | 3532884..3534092 | + | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| JMX26_RS17100 () | 3534337..3534411 | - | 75 | WP_120795374.1 | protein YahV | - |
| JMX26_RS17105 () | 3534717..3536750 | - | 2034 | WP_000131044.1 | choline BCCT transporter BetT | - |
| JMX26_RS17110 () | 3536879..3537466 | + | 588 | WP_130053469.1 | transcriptional regulator BetI | - |
| JMX26_RS17115 () | 3537480..3538952 | + | 1473 | WP_000089110.1 | betaine-aldehyde dehydrogenase | - |
| JMX26_RS17120 () | 3538966..3540636 | + | 1671 | WP_130053468.1 | choline dehydrogenase | - |
| JMX26_RS17125 () | 3540849..3541517 | + | 669 | WP_001209100.1 | hypothetical protein | - |
| JMX26_RS17130 () | 3541760..3542455 | - | 696 | WP_000370307.1 | lactate utilization protein C | - |
| JMX26_RS17135 () | 3542448..3543875 | - | 1428 | WP_130053467.1 | iron-sulfur cluster-binding protein | - |
| JMX26_RS17140 () | 3543886..3544605 | - | 720 | WP_001102108.1 | (Fe-S)-binding protein | - |
| JMX26_RS17145 () | 3545132..3545986 | - | 855 | WP_113418144.1 | DNA-binding transcriptional regulator RclR | - |
| JMX26_RS17150 () | 3546212..3547537 | + | 1326 | WP_130053466.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| JMX26_RS17155 () | 3547646..3547882 | + | 237 | WP_000474084.1 | DUF1471 domain-containing protein | - |
| JMX26_RS17160 () | 3547894..3548487 | + | 594 | WP_063117844.1 | reactive chlorine species resistance protein RclC | - |
| JMX26_RS17165 () | 3548646..3548774 | - | 129 | Protein_3356 | aldo/keto reductase | - |
| JMX26_RS17170 () | 3549077..3549928 | + | 852 | WP_000621009.1 | Right origin-binding protein | VF |
| JMX26_RS17175 () | 3550052..3550749 | - | 698 | Protein_3358 | IS1 family transposase IS1G | Transposase |
| JMX26_RS17180 () | 3550804..3551427 | - | 624 | Protein_3359 | hypothetical protein | VF |
| JMX26_RS17185 () | 3552543..3552644 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| JMX26_RS17190 () | 3553008..3553271 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| JMX26_RS17195 () | 3553271..3553411 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| JMX26_RS17200 () | 3553446..3553673 | - | 228 | WP_001147279.1 | hypothetical protein | - |
| JMX26_RS17205 () | 3554497..3554727 | + | 231 | Protein_3364 | HTH-type transcriptional regulator EcpR | VF |
| JMX26_RS17210 () | 3554783..3555480 | + | 698 | Protein_3365 | IS1 family transposase IS1R | Transposase |
| JMX26_RS17215 () | 3555698..3557167 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| JMX26_RS17220 () | 3557272..3559641 | + | 2370 | WP_000671170.1 | arginine decarboxylase | - |
| JMX26_RS17225 () | 3559716..3561215 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| JMX26_RS17230 () | 3561358..3562055 | + | 698 | Protein_3369 | IS1 family transposase | - |
| JMX26_RS17235 () | 3562256..3563050 | - | 795 | Protein_3370 | hypothetical protein | - |
| JMX26_RS17240 () | 3563107..3563804 | + | 698 | Protein_3371 | IS1 family transposase IS1R | Transposase |
| JMX26_RS17245 () | 3563816..3564103 | - | 288 | Protein_3372 | hypothetical protein | - |
| JMX26_RS17250 () | 3564081..3565580 | - | 1500 | Protein_3373 | zinc ribbon domain-containing protein | - |
| JMX26_RS17255 () | 3565635..3566332 | + | 698 | Protein_3374 | IS1 family transposase IS1X2 | Transposase |
| JMX26_RS17260 () | 3566349..3566564 | - | 216 | Protein_3375 | zinc ribbon domain-containing protein | - |
| JMX26_RS17265 () | 3566557..3567765 | - | 1209 | WP_001375306.1 | type I restriction-modification system subunit M | - |
| JMX26_RS17270 () | 3568007..3569215 | - | 1209 | WP_000772656.1 | Prophage integrase IntS ; Integrase | Integrase |
| JMX26_RS17280 () | 3569569..3570822 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JMX26_RS17285 () | 3570834..3571937 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JMX26_RS17290 () | 3572225..3573280 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| JMX26_RS17295 () | 3573319..3573720 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| JMX26_RS17300 () | 3573778..3575022 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3574438..3574518 | - | 81 | NuclAT_12 | - | - |
| - () | 3574438..3574518 | - | 81 | NuclAT_12 | - | - |
| - () | 3574438..3574518 | - | 81 | NuclAT_12 | - | - |
| - () | 3574438..3574518 | - | 81 | NuclAT_12 | - | - |
| JMX26_RS17305 () | 3575114..3575572 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JMX26_RS17310 () | 3575833..3577290 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| JMX26_RS17315 () | 3577347..3577868 | - | 522 | Protein_3385 | peptide chain release factor H | - |
| JMX26_RS17320 () | 3577867..3578070 | - | 204 | Protein_3386 | RNA ligase RtcB family protein | - |
| JMX26_RS17325 () | 3578316..3578768 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| JMX26_RS17330 () | 3578778..3579176 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JMX26_RS17335 () | 3579179..3579472 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JMX26_RS17340 () | 3579524..3580579 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| JMX26_RS17345 () | 3580650..3581573 | - | 924 | WP_001468020.1 | putative lateral flagellar export/assembly protein LafU | - |
| JMX26_RS17350 () | 3581576..3582439 | - | 864 | WP_001169518.1 | flagellar motor stator protein MotA | - |
| JMX26_RS17355 () | 3582452..3583171 | - | 720 | WP_000938740.1 | FliA/WhiG family RNA polymerase sigma factor | - |
| JMX26_RS17360 () | 3583191..3583658 | - | 468 | WP_000725257.1 | flagellar basal body-associated FliL family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|