MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 103664 bp
Accession: NZ_LR898867 Location: 5227934..5331597 Organism: Pseudomonas aeruginosa isolate MINF_3A-sc-2280432 Replicon: chromosome
Accession: NZ_LR898867 Location: 5227934..5331597 Organism: Pseudomonas aeruginosa isolate MINF_3A-sc-2280432 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMX72_RS24475 () | 5223443..5223715 | + | 273 | WP_074241374.1 | cysteine-rich CWC family protein | - |
| JMX72_RS24480 () | 5223715..5224407 | + | 693 | WP_003085458.1 | 16S rRNA pseudouridine(516) synthase | - |
| JMX72_RS24485 () | 5224543..5225586 | + | 1044 | WP_003134392.1 | L,D-transpeptidase | - |
| JMX72_RS24490 () | 5225666..5226403 | + | 738 | WP_003085453.1 | murein L,D-transpeptidase catalytic domain family protein | - |
| JMX72_RS24495 () | 5226855..5227757 | + | 903 | WP_003085447.1 | (R)-3-hydroxydecanoyl-ACP:CoA transacylase | - |
| JMX72_RS24505 () | 5228203..5230131 | + | 1929 | WP_003158602.1 | hypothetical protein ; Integrase | Integrase |
| JMX72_RS24510 () | 5230683..5231438 | + | 756 | WP_003158603.1 | hypothetical protein | - |
| JMX72_RS24515 () | 5231557..5231769 | + | 213 | WP_003158604.1 | AlpA family transcriptional regulator | - |
| JMX72_RS24520 () | 5231812..5232687 | + | 876 | WP_003158605.1 | hypothetical protein | VF |
| JMX72_RS24525 () | 5232671..5232919 | + | 249 | WP_003158606.1 | hypothetical protein | - |
| JMX72_RS24530 () | 5232912..5234540 | + | 1629 | WP_003158607.1 | ParB family protein | - |
| JMX72_RS24535 () | 5234556..5235116 | + | 561 | WP_003158608.1 | DUF2857 domain-containing protein | - |
| JMX72_RS24540 () | 5235120..5236364 | + | 1245 | WP_003158609.1 | hypothetical protein | - |
| JMX72_RS24545 () | 5236682..5237467 | + | 786 | WP_003158610.1 | TIGR03761 family integrating conjugative element protein | - |
| JMX72_RS24550 () | 5237464..5237991 | + | 528 | WP_003158611.1 | DUF3158 family protein | - |
| JMX72_RS24555 () | 5238065..5238505 | + | 441 | WP_003158612.1 | single-stranded DNA-binding protein | - |
| JMX72_RS24560 () | 5238775..5240799 | + | 2025 | WP_201720831.1 | DNA topoisomerase III | - |
| JMX72_RS24565 () | 5241324..5241569 | + | 246 | WP_003158614.1 | hypothetical protein | - |
| JMX72_RS24570 () | 5241898..5242110 | + | 213 | WP_003158617.1 | hypothetical protein | - |
| JMX72_RS24575 () | 5242132..5242524 | + | 393 | WP_003158618.1 | hypothetical protein | - |
| JMX72_RS24580 () | 5242737..5243474 | + | 738 | WP_003158619.1 | hypothetical protein | - |
| JMX72_RS24585 () | 5243569..5243847 | + | 279 | WP_003158620.1 | hypothetical protein | - |
| JMX72_RS24590 () | 5244127..5244939 | + | 813 | WP_003158621.1 | hypothetical protein | - |
| JMX72_RS24595 () | 5245316..5246230 | + | 915 | WP_003158622.1 | DUF3577 domain-containing protein | - |
| JMX72_RS24600 () | 5246285..5246983 | + | 699 | WP_003158623.1 | DUF3275 family protein | - |
| JMX72_RS24605 () | 5247078..5247479 | + | 402 | WP_003158624.1 | hypothetical protein | - |
| JMX72_RS24610 () | 5247562..5248212 | + | 651 | WP_003158625.1 | hypothetical protein | - |
| JMX72_RS24615 () | 5248277..5249398 | + | 1122 | WP_003158626.1 | O-methyltransferase | - |
| JMX72_RS24620 () | 5249499..5249810 | + | 312 | WP_003158627.1 | hypothetical protein | - |
| JMX72_RS24625 () | 5249948..5252227 | + | 2280 | WP_003158628.1 | DEAD/DEAH box helicase | - |
| JMX72_RS24630 () | 5252461..5253039 | + | 579 | WP_003158629.1 | hypothetical protein | VF |
| JMX72_RS24635 () | 5253036..5253677 | + | 642 | WP_003158630.1 | hypothetical protein | - |
| JMX72_RS24640 () | 5253692..5254429 | + | 738 | WP_003158631.1 | TIGR03759 family integrating conjugative element protein | - |
| JMX72_RS24645 () | 5254411..5255016 | + | 606 | WP_003158632.1 | transglycosylase SLT domain-containing protein | - |
| JMX72_RS24650 () | 5255013..5255561 | + | 549 | WP_003158633.1 | integrating conjugative element protein | - |
| JMX72_RS24655 () | 5255566..5257752 | + | 2187 | WP_003158634.1 | type IV conjugative transfer system coupling protein TraD | - |
| JMX72_RS24660 () | 5257749..5258498 | + | 750 | WP_003158635.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| JMX72_RS24665 () | 5258499..5259869 | - | 1371 | WP_003158636.1 | hypothetical protein | - |
| JMX72_RS24670 () | 5260031..5260411 | + | 381 | WP_003158637.1 | RAQPRD family integrative conjugative element protein | - |
| JMX72_RS24675 () | 5260408..5260641 | + | 234 | WP_003050225.1 | TIGR03758 family integrating conjugative element protein | - |
| JMX72_RS24680 () | 5260658..5261017 | + | 360 | WP_003158638.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| JMX72_RS24685 () | 5261030..5261440 | + | 411 | WP_003158639.1 | TIGR03750 family conjugal transfer protein | - |
| JMX72_RS24690 () | 5261437..5262126 | + | 690 | WP_003158640.1 | TIGR03746 family integrating conjugative element protein | - |
| JMX72_RS24695 () | 5262123..5263055 | + | 933 | WP_003158641.1 | TIGR03749 family integrating conjugative element protein | - |
| JMX72_RS24700 () | 5263045..5264463 | + | 1419 | WP_003158643.1 | TIGR03752 family integrating conjugative element protein | - |
| JMX72_RS24705 () | 5264444..5264884 | + | 441 | WP_003158644.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| JMX72_RS24710 () | 5264884..5267754 | + | 2871 | WP_003158645.1 | conjugative transfer ATPase | - |
| JMX72_RS24715 () | 5267770..5268522 | + | 753 | WP_031299380.1 | DsbA family protein | - |
| JMX72_RS24720 () | 5268709..5269203 | + | 495 | WP_003158647.1 | DNA repair protein RadC | - |
| JMX72_RS24725 () | 5269347..5269793 | + | 447 | WP_003158648.1 | TIGR03757 family integrating conjugative element protein | - |
| JMX72_RS24730 () | 5269790..5270737 | + | 948 | WP_003158649.1 | TIGR03756 family integrating conjugative element protein | - |
| JMX72_RS24735 () | 5270748..5272142 | + | 1395 | WP_003158650.1 | integrating conjugative element protein | - |
| JMX72_RS24740 () | 5272139..5272498 | + | 360 | WP_003158651.1 | hypothetical protein | - |
| JMX72_RS24745 () | 5272514..5274037 | + | 1524 | WP_003158652.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| JMX72_RS24750 () | 5274044..5274406 | - | 363 | WP_003158653.1 | DUF3742 family protein | - |
| JMX72_RS24755 () | 5274434..5274892 | - | 459 | WP_003158654.1 | type II toxin-antitoxin system YhaV family toxin | - |
| JMX72_RS24760 () | 5274892..5275209 | - | 318 | WP_003158655.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| JMX72_RS24765 () | 5275521..5277383 | + | 1863 | WP_003158656.1 | TraI domain-containing protein | - |
| JMX72_RS24770 () | 5277394..5278128 | - | 735 | Protein_4902 | DUF2130 domain-containing protein | - |
| JMX72_RS24775 () | 5278161..5278361 | - | 201 | WP_003159550.1 | Tn3 family transposase | - |
| JMX72_RS24780 () | 5278544..5281459 | - | 2916 | WP_003158660.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| JMX72_RS24785 () | 5281605..5284337 | - | 2733 | Protein_4905 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| JMX72_RS24790 () | 5284340..5284900 | - | 561 | WP_003124096.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| JMX72_RS24795 () | 5285031..5285234 | - | 204 | WP_033865223.1 | DUF3330 domain-containing protein | - |
| JMX72_RS24800 () | 5285425..5286390 | - | 966 | WP_077260301.1 | IS91 family transposase ISAzo26 | Transposase |
| JMX72_RS24805 () | 5286413..5287627 | - | 1215 | WP_201720832.1 | IS4 family transposase IS1481A | Transposase |
| JMX72_RS24810 () | 5288007..5289227 | + | 1221 | WP_032084014.1 | hypothetical protein | ARG |
| JMX72_RS24815 () | 5289411..5289758 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| JMX72_RS24820 () | 5289752..5290723 | + | 972 | WP_001747810.1 | dihydropteroate synthase | - |
| JMX72_RS24825 () | 5290940..5292154 | + | 1215 | WP_001747811.1 | Bicyclomycin resistance protein | ARG |
| JMX72_RS24830 () | 5292248..5292364 | + | 117 | Protein_4914 | DUF3363 domain-containing protein | - |
| JMX72_RS24835 () | 5292361..5292987 | - | 627 | WP_000163574.1 | tetracycline resistance transcriptional repressor TetR(G) | - |
| JMX72_RS24840 () | 5293091..5294266 | + | 1176 | WP_001257840.1 | Tetracycline resistance protein, class C | ARG |
| JMX72_RS24845 () | 5294287..5294481 | + | 195 | Protein_4917 | LysR family transcriptional regulator | - |
| JMX72_RS24850 () | 5294584..5295420 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| JMX72_RS24855 () | 5295420..5296223 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| JMX72_RS24860 () | 5296235..5296903 | - | 669 | WP_023434504.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| JMX72_RS24865 () | 5297029..5299914 | + | 2886 | WP_034051682.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| JMX72_RS24870 () | 5299948..5300553 | + | 606 | Protein_4922 | LysR family transcriptional regulator | - |
| JMX72_RS24875 () | 5300645..5301103 | - | 459 | Protein_4923 | IS91 family transposase ISVsa3 | Transposase |
| JMX72_RS24880 () | 5301068..5301679 | + | 612 | WP_201720833.1 | Eco29kI family restriction endonuclease | - |
| JMX72_RS24885 () | 5301680..5302585 | + | 906 | WP_201720834.1 | 23S ribosomal RNA methyltransferase Erm | - |
| JMX72_RS24890 () | 5302572..5303006 | + | 435 | WP_201720835.1 | ABC transporter ATP-binding protein | - |
| JMX72_RS24895 () | 5303205..5304737 | - | 1533 | WP_001747814.1 | IS91 family transposase ISVsa3 | Transposase |
| JMX72_RS24900 () | 5304964..5305425 | - | 462 | WP_074424383.1 | 60 kDa chaperonin | VF |
| JMX72_RS24905 () | 5306163..5306717 | + | 555 | WP_003159191.1 | aminoglycoside N-acetyltransferase AAC(6')-Ib4 | - |
| JMX72_RS24910 () | 5306847..5307713 | + | 867 | WP_001931474.1 | Beta-lactamase PSE-1 | ARG |
| JMX72_RS24915 () | 5307930..5308277 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| JMX72_RS24920 () | 5308271..5309110 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| JMX72_RS24925 () | 5309238..5309444 | + | 207 | WP_033896018.1 | hypothetical protein | - |
| JMX72_RS24930 () | 5309484..5310248 | + | 765 | WP_023464298.1 | IS6 family transposase IS6100 | Transposase |
| JMX72_RS24935 () | 5310290..5311561 | - | 1272 | Protein_4935 | DEAD/DEAH box helicase family protein | - |
| JMX72_RS24940 () | 5311574..5312482 | - | 909 | WP_003158909.1 | WYL domain-containing protein | - |
| JMX72_RS24945 () | 5312762..5313652 | + | 891 | WP_003158908.1 | Hca operon transcriptional activator HcaR | VF |
| JMX72_RS24950 () | 5313787..5314104 | + | 318 | WP_023464296.1 | helix-turn-helix domain-containing protein | - |
| JMX72_RS24955 () | 5314097..5315128 | + | 1032 | WP_003158906.1 | ATP-dependent zinc metalloprotease FtsH | VF |
| JMX72_RS24960 () | 5315106..5317616 | + | 2511 | WP_003160813.1 | S8 family peptidase | - |
| JMX72_RS24965 () | 5317715..5318020 | - | 306 | WP_003158903.1 | helix-turn-helix domain-containing protein | - |
| JMX72_RS24970 () | 5318142..5318783 | + | 642 | WP_003158902.1 | substrate-binding domain-containing protein | - |
| JMX72_RS24975 () | 5319071..5319418 | - | 348 | WP_019486378.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JMX72_RS24980 () | 5319428..5319679 | - | 252 | WP_003114155.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JMX72_RS24985 () | 5319893..5320876 | - | 984 | WP_033990852.1 | IS91 family transposase ISCARN110 | Transposase |
| JMX72_RS24990 () | 5320876..5322168 | - | 1293 | WP_033990854.1 | hypothetical protein | - |
| JMX72_RS24995 () | 5322398..5323672 | - | 1275 | WP_033990855.1 | hypothetical protein | VF |
| JMX72_RS25000 () | 5323676..5324032 | - | 357 | WP_003114150.1 | DUF2523 domain-containing protein | - |
| JMX72_RS25005 () | 5324037..5325311 | - | 1275 | WP_074241366.1 | attachment protein | - |
| JMX72_RS25010 () | 5325459..5325707 | - | 249 | WP_033990857.1 | phage coat protein B | - |
| JMX72_RS25015 () | 5325720..5325971 | - | 252 | WP_033964688.1 | hypothetical protein | - |
| JMX72_RS25020 () | 5326093..5326527 | - | 435 | WP_003140508.1 | hypothetical protein | - |
| JMX72_RS25025 () | 5327042..5327329 | - | 288 | WP_052150385.1 | DUF5447 family protein | - |
| JMX72_RS25030 () | 5327556..5327705 | - | 150 | Protein_4954 | Arc family DNA-binding protein | - |
| JMX72_RS25035 () | 5327702..5327917 | - | 216 | WP_016852068.1 | hypothetical protein | - |
| JMX72_RS25040 () | 5328373..5329170 | + | 798 | WP_125093622.1 | hypothetical protein | - |
| JMX72_RS25045 () | 5329167..5329895 | + | 729 | WP_126071378.1 | hypothetical protein | - |
| JMX72_RS25050 () | 5329916..5330686 | + | 771 | WP_071534860.1 | hypothetical protein | - |
| JMX72_RS25055 () | 5330943..5331410 | + | 468 | WP_125093624.1 | hypothetical protein | - |
| JMX72_RS25060 () | 5331734..5332210 | - | 477 | WP_003085438.1 | hypothetical protein | - |
| JMX72_RS25065 () | 5332442..5332735 | - | 294 | WP_003085435.1 | DUF2845 domain-containing protein | - |
| JMX72_RS25070 () | 5333075..5333332 | + | 258 | WP_003085431.1 | YjhX family toxin | - |
| JMX72_RS25075 () | 5333392..5333898 | + | 507 | WP_023096064.1 | N-acetyltransferase | - |
| JMX72_RS25080 () | 5333942..5334337 | - | 396 | WP_019485089.1 | lactoylglutathione lyase | - |
| JMX72_RS25085 () | 5334382..5334678 | - | 297 | WP_003085421.1 | antibiotic biosynthesis monooxygenase | - |
| JMX72_RS25090 () | 5334794..5335648 | + | 855 | WP_014603585.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|