MGE detailed information
MGE type: Conjugative plasmid MGE length: 70350 bp
Accession: NZ_LR890715 Location: 1..70350 Organism: Escherichia coli isolate MSB1_6C-sc-2280315 Replicon: plasmid 2
Accession: NZ_LR890715 Location: 1..70350 Organism: Escherichia coli isolate MSB1_6C-sc-2280315 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW19_RS24890 () | 1..858 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| JMW19_RS24895 () | 1559..1717 | + | 159 | WP_032142560.1 | hypothetical protein | - |
| JMW19_RS24900 () | 1772..2041 | + | 270 | WP_012881119.1 | ABC transporter ATPase | Antitoxin Detail |
| JMW19_RS24905 () | 2038..2319 | + | 282 | WP_012881118.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JMW19_RS24910 () | 2365..3213 | + | 849 | WP_012881117.1 | 3'-5' exonuclease | - |
| JMW19_RS24915 () | 3330..3812 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| JMW19_RS24920 () | 3841..5325 | - | 1485 | WP_016240487.1 | IS5 family transposase IS903B | Transposase |
| JMW19_RS24925 () | 5405..6280 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| JMW19_RS24930 () | 6530..7792 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| JMW19_RS24935 () | 8136..9323 | - | 1188 | WP_025999368.1 | MFS transporter | - |
| JMW19_RS24940 () | 9380..10141 | - | 762 | WP_000020504.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| JMW19_RS24945 () | 10141..11178 | - | 1038 | WP_001545318.1 | Hemin transport system permease protein HmuU | VF |
| JMW19_RS24950 () | 11178..12176 | - | 999 | WP_012881113.1 | ABC transporter substrate-binding protein | - |
| JMW19_RS24955 () | 12326..12484 | - | 159 | Protein_14 | transposase | - |
| JMW19_RS24960 () | 12527..12769 | - | 243 | Protein_15 | helix-turn-helix domain-containing protein | - |
| JMW19_RS24965 () | 13027..13377 | - | 351 | WP_001414994.1 | plasmid partitioning/stability family protein | - |
| JMW19_RS24970 () | 13380..14342 | - | 963 | WP_000959878.1 | plasmid segregation protein ParM | - |
| JMW19_RS24975 () | 14489..14782 | + | 294 | WP_032142565.1 | hypothetical protein | - |
| JMW19_RS24980 () | 14858..15541 | + | 684 | WP_012881149.1 | DNA methylase | - |
| JMW19_RS24985 () | 15542..15763 | + | 222 | WP_012881148.1 | hypothetical protein | - |
| JMW19_RS24990 () | 15777..16211 | + | 435 | WP_012917669.1 | DUF1380 family protein | - |
| JMW19_RS24995 () | 16262..17038 | + | 777 | WP_025999342.1 | hypothetical protein | - |
| JMW19_RS25000 () | 17577..17879 | + | 303 | WP_072126845.1 | antirestriction protein | - |
| JMW19_RS25005 () | 17926..18348 | + | 423 | WP_012917670.1 | DUF1380 family protein | - |
| JMW19_RS25010 () | 18345..18536 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| JMW19_RS25015 () | 19573..19803 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| JMW19_RS25020 () | 19855..21216 | + | 1362 | WP_012917672.1 | DUF3560 domain-containing protein | - |
| JMW19_RS25025 () | 21263..21826 | + | 564 | WP_012881140.1 | class I SAM-dependent methyltransferase | - |
| JMW19_RS25030 () | 21978..22244 | + | 267 | WP_071828223.1 | hypothetical protein | - |
| JMW19_RS25035 () | 22717..23238 | + | 522 | WP_012881138.1 | single-stranded DNA-binding protein | - |
| JMW19_RS25040 () | 23294..23527 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| JMW19_RS25045 () | 23591..25549 | + | 1959 | WP_012881137.1 | ParB/RepB/Spo0J family partition protein | - |
| JMW19_RS25050 () | 25604..26038 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| JMW19_RS25055 () | 26035..26754 | + | 720 | WP_012881136.1 | plasmid SOS inhibition protein A | - |
| JMW19_RS25060 () | 26751..27065 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - () | 27014..27221 | + | 208 | NuclAT_0 | - | - |
| - () | 27014..27221 | + | 208 | NuclAT_0 | - | - |
| - () | 27014..27221 | + | 208 | NuclAT_0 | - | - |
| - () | 27014..27221 | + | 208 | NuclAT_0 | - | - |
| JMW19_RS25065 () | 27274..27435 | + | 162 | WP_012881135.1 | type I toxin-antitoxin system Hok family toxin | - |
| JMW19_RS25070 () | 27673..27942 | - | 270 | WP_001388591.1 | hypothetical protein | - |
| JMW19_RS25075 () | 28281..28604 | + | 324 | WP_000533253.1 | hypothetical protein | - |
| JMW19_RS25080 () | 28663..28905 | + | 243 | WP_000540588.1 | hypothetical protein | - |
| JMW19_RS25085 () | 29171..29437 | + | 267 | WP_071828223.1 | hypothetical protein | - |
| JMW19_RS25090 () | 29908..30204 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| JMW19_RS25095 () | 30314..31135 | + | 822 | WP_001234437.1 | DUF945 domain-containing protein | - |
| JMW19_RS25100 () | 31431..32033 | - | 603 | WP_000243715.1 | hypothetical protein | VF |
| JMW19_RS25105 () | 32356..32739 | + | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| JMW19_RS25110 () | 32933..33604 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| JMW19_RS25115 () | 33741..33968 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| JMW19_RS25120 () | 34001..34360 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| JMW19_RS25125 () | 34375..34686 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| JMW19_RS25130 () | 34708..35274 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| JMW19_RS25135 () | 35261..35989 | + | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| JMW19_RS25140 () | 35989..37440 | + | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| JMW19_RS25145 () | 37409..37996 | + | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| JMW19_RS25150 () | 37935..38303 | + | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| JMW19_RS25155 () | 38300..38815 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JMW19_RS25160 () | 38950..39171 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| JMW19_RS25165 () | 39164..39577 | + | 414 | WP_000549589.1 | hypothetical protein | - |
| JMW19_RS25170 () | 39570..40043 | + | 474 | WP_000549568.1 | hypothetical protein | - |
| JMW19_RS25175 () | 40123..40341 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| JMW19_RS25180 () | 40369..40716 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| JMW19_RS25185 () | 40842..43472 | + | 2631 | WP_048295894.1 | type IV secretion system protein TraC | - |
| JMW19_RS25190 () | 43469..43855 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| JMW19_RS25195 () | 43852..44484 | + | 633 | WP_048295895.1 | type-F conjugative transfer system protein TraW | - |
| JMW19_RS25200 () | 44481..45473 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| JMW19_RS25205 () | 45503..45808 | + | 306 | WP_000224412.1 | hypothetical protein | - |
| JMW19_RS25210 () | 45817..46455 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JMW19_RS25215 () | 46452..48302 | + | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JMW19_RS25220 () | 48329..48586 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| JMW19_RS25225 () | 48579..49322 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JMW19_RS25230 () | 49336..49680 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| JMW19_RS25235 () | 49799..50083 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JMW19_RS25240 () | 50070..50615 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JMW19_RS25245 () | 50545..50892 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| JMW19_RS25250 () | 50840..51265 | + | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| JMW19_RS25255 () | 51252..52625 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| JMW19_RS25260 () | 52622..55444 | + | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| JMW19_RS25265 () | 55460..55945 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| JMW19_RS25270 () | 55994..56725 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| JMW19_RS25275 () | 56928..57665 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| JMW19_RS25280 () | 57716..60004 | + | 2289 | WP_125097878.1 | Coupling protein TraD | VF |
| JMW19_RS25285 () | 60004..65274 | + | 5271 | WP_000948354.1 | Multifunctional conjugation protein TraI | Relaxase |
| JMW19_RS25290 () | 65294..66040 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| JMW19_RS25295 () | 66099..66959 | + | 861 | WP_000704523.1 | Quorum-quenching protein AidA | VF |
| JMW19_RS25300 () | 67062..67622 | + | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| JMW19_RS25305 () | 67751..67963 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| JMW19_RS25310 () | 68208..68669 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| JMW19_RS25315 () | 68715..68924 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| JMW19_RS25320 () | 68962..69552 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| JMW19_RS25325 () | 69792..70046 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|