MGE detailed information
MGE type: Prophage MGE length: 47977 bp
Accession: NZ_LR890536 Location: 4774177..4822153 Organism: Escherichia coli isolate MSB1_8B-sc-2280300 Replicon: chromosome
Accession: NZ_LR890536 Location: 4774177..4822153 Organism: Escherichia coli isolate MSB1_8B-sc-2280300 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMX06_RS23055 () | 4769232..4769648 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| JMX06_RS23060 () | 4769759..4770472 | - | 714 | WP_001226928.1 | acid phosphatase AphA | - |
| JMX06_RS23065 () | 4770873..4771376 | + | 504 | WP_001027697.1 | hypothetical protein | - |
| JMX06_RS23070 () | 4771599..4772792 | - | 1194 | WP_022646434.1 | aromatic amino acid transaminase | - |
| JMX06_RS23075 () | 4773045..4774124 | - | 1080 | WP_001147328.1 | alanine racemase | - |
| JMX06_RS23080 () | 4774177..4775592 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| JMX06_RS23085 () | 4775675..4776658 | + | 984 | WP_022646433.1 | Quinone oxidoreductase 1 | VF |
| JMX06_RS23090 () | 4776824..4777066 | - | 243 | WP_000891408.1 | envelope stress response protein PspG | - |
| JMX06_RS23095 () | 4777200..4778237 | - | 1038 | WP_000543825.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| JMX06_RS23100 () | 4778326..4779423 | + | 1098 | WP_000332260.1 | hypothetical protein ; Integrase | Integrase |
| JMX06_RS23105 () | 4779485..4779733 | + | 249 | WP_001217539.1 | DinI-like family protein | - |
| JMX06_RS23110 () | 4779844..4780131 | - | 288 | WP_022646432.1 | hypothetical protein | - |
| JMX06_RS23115 () | 4780142..4780846 | - | 705 | WP_001595444.1 | tail fiber domain-containing protein | - |
| JMX06_RS23120 () | 4780856..4781137 | - | 282 | WP_022646431.1 | hypothetical protein | - |
| JMX06_RS23125 () | 4781134..4783482 | - | 2349 | WP_022646430.1 | prophage tail fiber N-terminal domain-containing protein | - |
| JMX06_RS23130 () | 4783547..4784146 | - | 600 | WP_001228252.1 | Outer membrane protein X | VF |
| JMX06_RS23135 () | 4784214..4787693 | - | 3480 | WP_024946503.1 | host specificity protein J | - |
| JMX06_RS23140 () | 4787754..4788401 | - | 648 | WP_000741576.1 | tail assembly protein | - |
| JMX06_RS23145 () | 4788299..4789042 | - | 744 | WP_032152077.1 | C40 family peptidase | - |
| JMX06_RS23150 () | 4789047..4789745 | - | 699 | WP_021543563.1 | phage minor tail protein L | - |
| JMX06_RS23155 () | 4789745..4790086 | - | 342 | WP_023908869.1 | phage tail protein | - |
| JMX06_RS23160 () | 4790079..4793321 | - | 3243 | WP_024946502.1 | phage tail tape measure protein | - |
| JMX06_RS23165 () | 4793367..4793708 | - | 342 | WP_021543566.1 | zinc ribbon domain-containing protein | - |
| JMX06_RS23170 () | 4793767..4794045 | - | 279 | WP_021543567.1 | DUF4035 domain-containing protein | - |
| JMX06_RS23175 () | 4794069..4794440 | - | 372 | WP_021543568.1 | phage tail assembly chaperone | - |
| JMX06_RS23180 () | 4794455..4795159 | - | 705 | WP_023908871.1 | immunoglobulin domain-containing protein | - |
| JMX06_RS23185 () | 4795219..4795563 | - | 345 | WP_021543570.1 | DUF3168 domain-containing protein | - |
| JMX06_RS23190 () | 4795560..4796009 | - | 450 | WP_021543571.1 | HK97 gp10 family phage protein | - |
| JMX06_RS23195 () | 4796006..4796344 | - | 339 | WP_021543572.1 | phage head closure protein | - |
| JMX06_RS23200 () | 4796354..4796659 | - | 306 | WP_021543573.1 | head-tail connector protein | - |
| JMX06_RS23205 () | 4796671..4796859 | - | 189 | WP_023908872.1 | hypothetical protein | - |
| JMX06_RS23210 () | 4796909..4798114 | - | 1206 | WP_023908873.1 | phage major capsid protein | - |
| JMX06_RS23215 () | 4798129..4798779 | - | 651 | WP_001193633.1 | HK97 family phage prohead protease | - |
| JMX06_RS23220 () | 4798757..4799998 | - | 1242 | WP_023908874.1 | phage portal protein | - |
| JMX06_RS23225 () | 4799998..4800180 | - | 183 | WP_000605605.1 | hypothetical protein | - |
| JMX06_RS23230 () | 4800192..4801688 | - | 1497 | WP_065312442.1 | terminase large subunit | - |
| JMX06_RS23235 () | 4801922..4802416 | - | 495 | WP_000929184.1 | phage terminase small subunit P27 family | - |
| JMX06_RS23240 () | 4802543..4802893 | - | 351 | WP_024946501.1 | HNH endonuclease | - |
| JMX06_RS23245 () | 4802959..4803162 | - | 204 | WP_000699783.1 | hypothetical protein | - |
| JMX06_RS23250 () | 4803280..4803654 | - | 375 | WP_021543580.1 | hypothetical protein | - |
| JMX06_RS23255 () | 4803693..4804136 | - | 444 | WP_023908876.1 | lysis protein | - |
| JMX06_RS23260 () | 4804133..4804609 | - | 477 | WP_021543581.1 | glycoside hydrolase family protein | - |
| JMX06_RS23265 () | 4804613..4804948 | - | 336 | WP_024946499.1 | phage holin, lambda family | - |
| JMX06_RS23270 () | 4805078..4805281 | - | 204 | WP_001181554.1 | hypothetical protein | - |
| JMX06_RS23275 () | 4805474..4806226 | - | 753 | WP_023908878.1 | antitermination protein | - |
| JMX06_RS23280 () | 4806240..4807229 | - | 990 | WP_024946498.1 | DUF968 domain-containing protein | - |
| JMX06_RS23285 () | 4807237..4808046 | - | 810 | WP_023908880.1 | KilA-N domain-containing protein | - |
| JMX06_RS23290 () | 4808066..4808455 | - | 390 | WP_000767133.1 | RusA family crossover junction endodeoxyribonuclease | - |
| JMX06_RS23295 () | 4808452..4808778 | - | 327 | WP_000210154.1 | LexA family transcriptional regulator | - |
| JMX06_RS23300 () | 4808775..4809428 | - | 654 | WP_001401088.1 | phage N-6-adenine-methyltransferase | - |
| JMX06_RS23305 () | 4809428..4809916 | - | 489 | WP_023908881.1 | PerC family transcriptional regulator | - |
| JMX06_RS23310 () | 4809913..4810854 | - | 942 | WP_023908882.1 | helix-turn-helix domain-containing protein | - |
| JMX06_RS23315 () | 4810844..4811023 | - | 180 | WP_071789194.1 | DUF4222 domain-containing protein | - |
| JMX06_RS23320 () | 4811199..4811756 | - | 558 | WP_024946496.1 | hypothetical protein | - |
| JMX06_RS23325 () | 4811800..4812000 | - | 201 | WP_021527487.1 | helix-turn-helix domain-containing protein | - |
| JMX06_RS23330 () | 4812091..4812765 | + | 675 | WP_021530636.1 | LexA family transcriptional regulator | - |
| JMX06_RS23335 () | 4813433..4813795 | + | 363 | WP_000135680.1 | hypothetical protein | - |
| JMX06_RS23340 () | 4813861..4814685 | + | 825 | WP_023908886.1 | DUF2303 family protein | - |
| JMX06_RS23345 () | 4814904..4815656 | + | 753 | WP_024946495.1 | hypothetical protein | - |
| JMX06_RS23350 () | 4815693..4815974 | + | 282 | WP_001093916.1 | pyocin activator PrtN family protein | - |
| JMX06_RS23355 () | 4816022..4816195 | - | 174 | WP_023908888.1 | hypothetical protein | - |
| JMX06_RS23360 () | 4816235..4816621 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| JMX06_RS23365 () | 4816651..4817223 | - | 573 | WP_000458583.1 | SocA family protein | Antitoxin Detail |
| JMX06_RS23370 () | 4817459..4817581 | - | 123 | WP_001300034.1 | hypothetical protein | - |
| JMX06_RS23375 () | 4817943..4818947 | - | 1005 | WP_022646425.1 | DUF2713 family protein | - |
| JMX06_RS23380 () | 4819265..4819780 | + | 516 | WP_000416263.1 | zinc uptake transcriptional repressor Zur | - |
| JMX06_RS23385 () | 4819822..4820031 | - | 210 | WP_001296638.1 | CsbD family protein | - |
| JMX06_RS23390 () | 4820147..4821472 | - | 1326 | WP_001361471.1 | MATE family efflux transporter DinF | - |
| JMX06_RS23395 () | 4821545..4822153 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| JMX06_RS23400 () | 4822263..4822631 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| JMX06_RS23405 () | 4822802..4825225 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| JMX06_RS23410 () | 4825380..4826252 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| JMX06_RS23415 () | 4826265..4826762 | - | 498 | WP_001308201.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|