MGE detailed information
MGE type: Genomic_island MGE length: 17744 bp
Accession: NZ_LR890405 Location: 4429702..4447445 Organism: Escherichia coli isolate MSB1_7C-sc-2280317 Replicon: chromosome
Accession: NZ_LR890405 Location: 4429702..4447445 Organism: Escherichia coli isolate MSB1_7C-sc-2280317 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW09_RS21225 () | 4426232..4426957 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| JMW09_RS21230 () | 4426994..4427533 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| JMW09_RS21235 () | 4427598..4428146 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| JMW09_RS21240 () | 4428628..4429224 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| JMW09_RS21245 () | 4429702..4430304 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| JMW09_RS21250 () | 4431760..4432476 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| JMW09_RS21255 () | 4432496..4433602 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| JMW09_RS21260 () | 4433667..4434647 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| JMW09_RS21265 () | 4435262..4436278 | - | 1017 | WP_001322394.1 | IS5 family transposase IS5D | Transposase |
| JMW09_RS21270 () | 4436429..4437669 | - | 1241 | Protein_4165 | DNA helicase | - |
| JMW09_RS21275 () | 4437785..4438030 | + | 246 | Protein_4166 | GNAT family N-acetyltransferase | - |
| JMW09_RS21280 () | 4438407..4438664 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| JMW09_RS21285 () | 4438676..4439221 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| JMW09_RS21290 () | 4439277..4440023 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| JMW09_RS21295 () | 4440192..4440410 | + | 219 | Protein_4170 | hypothetical protein | - |
| JMW09_RS21300 () | 4440448..4440564 | + | 117 | Protein_4171 | VOC family protein | - |
| JMW09_RS21305 () | 4440809..4441930 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| JMW09_RS21310 () | 4441927..4442205 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| JMW09_RS21315 () | 4442217..4443530 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| JMW09_RS21320 () | 4443543..4444349 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| JMW09_RS21325 () | 4444480..4444911 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| JMW09_RS21330 () | 4444923..4445555 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| JMW09_RS21335 () | 4445572..4446354 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| JMW09_RS21340 () | 4446657..4447445 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| JMW09_RS21345 () | 4447450..4448355 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| JMW09_RS21350 () | 4448366..4450333 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| JMW09_RS21355 () | 4450440..4451789 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|