MGE detailed information
MGE type: Genomic_island MGE length: 22529 bp
Accession: NZ_LR890326 Location: 4263475..4286003 Organism: Escherichia coli isolate MINF_1A-sc-2280431 Replicon: chromosome
Accession: NZ_LR890326 Location: 4263475..4286003 Organism: Escherichia coli isolate MINF_1A-sc-2280431 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMV91_RS20705 () | 4258734..4260044 | - | 1311 | WP_000460504.1 | serine dehydratase subunit alpha family protein | - |
| JMV91_RS20710 () | 4260072..4261025 | - | 954 | WP_001613884.1 | inner membrane transporter YhaO | - |
| JMV91_RS20715 () | 4261374..4261955 | - | 582 | WP_025750394.1 | hypothetical protein | - |
| JMV91_RS20720 () | 4261963..4262418 | - | 456 | Protein_4047 | IS5 family transposase | - |
| JMV91_RS20725 () | 4262453..4263328 | - | 876 | WP_012579082.1 | class A extended-spectrum beta-lactamase CTX-M-24 | - |
| JMV91_RS20730 () | 4263578..4264633 | - | 1056 | Protein_4049 | IS1380 family transposase ISEcp1 | Transposase |
| JMV91_RS20735 () | 4264780..4265760 | - | 981 | WP_001594591.1 | IS5 family transposase ISKpn26 | Transposase |
| JMV91_RS20740 () | 4265818..4266039 | - | 222 | Protein_4051 | IS1380 family transposase ISEcp1 | Transposase |
| JMV91_RS20745 () | 4266227..4266604 | - | 378 | Protein_4052 | hypothetical protein | - |
| JMV91_RS20750 () | 4266879..4268243 | - | 1365 | WP_000622115.1 | L-serine ammonia-lyase | - |
| JMV91_RS20755 () | 4268315..4268704 | - | 390 | WP_000719990.1 | enamine/imine deaminase | - |
| JMV91_RS20760 () | 4268718..4271012 | - | 2295 | WP_000861747.1 | 2-ketobutyrate formate-lyase/pyruvate formate-lyase | - |
| JMV91_RS20765 () | 4271046..4272254 | - | 1209 | WP_001361211.1 | propionate kinase | - |
| JMV91_RS20770 () | 4272280..4273611 | - | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| JMV91_RS20775 () | 4273633..4274622 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| JMV91_RS20780 () | 4274721..4275659 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| JMV91_RS20785 () | 4275848..4276192 | + | 345 | WP_000145833.1 | transcriptional activator TdcR | - |
| JMV91_RS20790 () | 4276448..4276987 | + | 540 | WP_000675735.1 | hypothetical protein | - |
| JMV91_RS20795 () | 4277009..4278196 | + | 1188 | WP_000484566.1 | YhaC family protein | - |
| JMV91_RS20805 () | 4278827..4279972 | - | 1146 | WP_001330125.1 | glycerate 2-kinase | - |
| JMV91_RS20810 () | 4280069..4280959 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| JMV91_RS20815 () | 4280989..4281759 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| JMV91_RS20820 () | 4281775..4283109 | - | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| JMV91_RS20825 () | 4283484..4285055 | + | 1572 | WP_001273756.1 | galactarate dehydratase | - |
| JMV91_RS20830 () | 4285204..4285539 | + | 336 | WP_021547164.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| JMV91_RS20835 () | 4285539..4286003 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| JMV91_RS20840 () | 4286058..4286867 | - | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| JMV91_RS20845 () | 4287116..4288396 | + | 1281 | WP_000681958.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| JMV91_RS20850 () | 4288419..4288892 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| JMV91_RS20855 () | 4288903..4289682 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| JMV91_RS20860 () | 4289672..4290550 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| JMV91_RS20865 () | 4290568..4291002 | + | 435 | WP_000948834.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|