MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 30638 bp
Accession: NZ_LR890303 Location: 1..30638 Organism: Escherichia coli isolate MSB1_3B-sc-2280406 Replicon: plasmid 5
Accession: NZ_LR890303 Location: 1..30638 Organism: Escherichia coli isolate MSB1_3B-sc-2280406 Replicon: plasmid 5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JM188_RS26365 () | 107..1186 | - | 1080 | WP_000007791.1 | hypothetical protein | VF |
| JM188_RS26370 () | 1197..1913 | - | 717 | WP_000832282.1 | type IV secretion system VirB5 protein | - |
| JM188_RS26375 () | 1925..4672 | - | 2748 | WP_021548632.1 | Type IV secretion system protein virB4 | VF |
| JM188_RS26380 () | 4691..4963 | - | 273 | WP_001328551.1 | Type IV secretion system protein virB2 | VF |
| JM188_RS26385 () | 5031..5651 | - | 621 | WP_201736466.1 | Type IV secretion system protein virB1 | VF |
| JM188_RS26390 () | 6007..6240 | - | 234 | WP_000121161.1 | EexN family lipoprotein | - |
| JM188_RS26395 () | 6245..6511 | - | 267 | WP_000160395.1 | hypothetical protein | - |
| JM188_RS26400 () | 6588..7817 | - | 1230 | WP_001694183.1 | hypothetical protein | Relaxase |
| JM188_RS26405 () | 7829..8329 | - | 501 | WP_001694182.1 | hypothetical protein | - |
| JM188_RS26410 () | 8693..9040 | - | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| JM188_RS26415 () | 9037..9285 | - | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| JM188_RS26420 () | 9592..9897 | - | 306 | WP_072182957.1 | hypothetical protein | - |
| JM188_RS26425 () | 9965..10237 | - | 273 | WP_001272373.1 | hypothetical protein | - |
| JM188_RS26430 () | 10239..10591 | - | 353 | Protein_13 | molecular chaperone DnaJ | - |
| JM188_RS26435 () | 10686..10913 | - | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| JM188_RS26440 () | 10900..11151 | - | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| JM188_RS26445 () | 11148..11690 | - | 543 | WP_001083906.1 | hypothetical protein | - |
| JM188_RS26450 () | 11795..12310 | - | 516 | WP_001025395.1 | J domain-containing protein | - |
| JM188_RS26455 () | 13726..14592 | + | 867 | WP_053911940.1 | replication initiation protein | - |
| JM188_RS26460 () | 14605..15009 | + | 405 | WP_000654311.1 | hypothetical protein | - |
| JM188_RS26465 () | 15144..15671 | + | 528 | WP_000577044.1 | DUF2726 domain-containing protein | - |
| JM188_RS26470 () | 15966..16181 | - | 216 | WP_000806548.1 | hypothetical protein | - |
| JM188_RS26475 () | 16206..16475 | - | 270 | WP_001086090.1 | hypothetical protein | - |
| JM188_RS26480 () | 16550..17197 | - | 648 | WP_000587671.1 | P-loop NTPase | - |
| JM188_RS26485 () | 17818..18282 | - | 465 | WP_001293143.1 | H-NS histone family protein | - |
| JM188_RS26490 () | 18298..18504 | - | 207 | WP_000850857.1 | hemolysin expression modulator Hha | - |
| JM188_RS26495 () | 18501..20654 | - | 2154 | WP_053911937.1 | type IA DNA topoisomerase | - |
| JM188_RS26500 () | 20659..21234 | - | 576 | WP_001198961.1 | hypothetical protein | - |
| JM188_RS26505 () | 21245..21520 | - | 276 | WP_000109868.1 | hypothetical protein | - |
| JM188_RS26510 () | 21595..22347 | - | 753 | WP_000988355.1 | hypothetical protein | - |
| JM188_RS26515 () | 22626..23138 | - | 513 | WP_001221548.1 | thermonuclease family protein | - |
| JM188_RS26520 () | 23135..23569 | - | 435 | WP_077251204.1 | hypothetical protein | - |
| JM188_RS26525 () | 23641..23892 | - | 252 | WP_000005456.1 | hypothetical protein | - |
| JM188_RS26530 () | 23947..24252 | - | 306 | WP_032282386.1 | conjugal transfer protein | - |
| JM188_RS26535 () | 24236..24655 | - | 420 | WP_000737412.1 | hypothetical protein | - |
| JM188_RS26540 () | 24667..26529 | - | 1863 | WP_172440217.1 | type IV secretory system conjugative DNA transfer family protein | - |
| JM188_RS26545 () | 26516..27544 | - | 1029 | WP_001014667.1 | Type IV secretion system protein VirB11 | VF |
| JM188_RS26550 () | 27546..28664 | - | 1119 | WP_000131269.1 | Type IV secretion system protein virB10 | VF |
| JM188_RS26555 () | 28657..29565 | - | 909 | WP_001329500.1 | Type IV secretion system protein virB9 | VF |
| JM188_RS26560 () | 29562..30248 | - | 687 | WP_021548634.1 | Type IV secretion system protein virB8 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|