MGE detailed information
MGE type: Genomic_island MGE length: 17744 bp
Accession: NZ_LR890288 Location: 4120423..4138166 Organism: Escherichia coli isolate MSB1_1A-sc-2280383 Replicon: chromosome
Accession: NZ_LR890288 Location: 4120423..4138166 Organism: Escherichia coli isolate MSB1_1A-sc-2280383 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW08_RS19565 () | 4116953..4117678 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| JMW08_RS19570 () | 4117715..4118254 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| JMW08_RS19575 () | 4118319..4118867 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| JMW08_RS19580 () | 4119349..4119945 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| JMW08_RS19585 () | 4120423..4121025 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| JMW08_RS19590 () | 4122481..4123197 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| JMW08_RS19595 () | 4123217..4124323 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| JMW08_RS19600 () | 4124388..4125368 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| JMW08_RS19605 () | 4125983..4126999 | - | 1017 | WP_001322394.1 | IS5 family transposase IS5D | Transposase |
| JMW08_RS19610 () | 4127150..4128390 | - | 1241 | Protein_3831 | DNA helicase | - |
| JMW08_RS19615 () | 4128506..4128751 | + | 246 | Protein_3832 | GNAT family N-acetyltransferase | - |
| JMW08_RS19620 () | 4129128..4129385 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| JMW08_RS19625 () | 4129397..4129942 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| JMW08_RS19630 () | 4129998..4130744 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| JMW08_RS19635 () | 4130913..4131131 | + | 219 | Protein_3836 | hypothetical protein | - |
| JMW08_RS19640 () | 4131169..4131285 | + | 117 | Protein_3837 | VOC family protein | - |
| JMW08_RS19645 () | 4131530..4132651 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| JMW08_RS19650 () | 4132648..4132926 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| JMW08_RS19655 () | 4132938..4134251 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| JMW08_RS19660 () | 4134264..4135070 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| JMW08_RS19665 () | 4135201..4135632 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| JMW08_RS19670 () | 4135644..4136276 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| JMW08_RS19675 () | 4136293..4137075 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| JMW08_RS19680 () | 4137378..4138166 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| JMW08_RS19685 () | 4138171..4139076 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| JMW08_RS19690 () | 4139087..4141054 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| JMW08_RS19695 () | 4141161..4142510 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|