MGE detailed information
MGE type: Conjugative plasmid MGE length: 85915 bp
Accession: NZ_LR890274 Location: 1..85915 Organism: Escherichia coli isolate MINF_7C-sc-2280452 Replicon: plasmid 5
Accession: NZ_LR890274 Location: 1..85915 Organism: Escherichia coli isolate MINF_7C-sc-2280452 Replicon: plasmid 5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW01_RS25855 () | 1..873 | + | 873 | WP_000729438.1 | incFII family plasmid replication initiator RepA | - |
| JMW01_RS25860 () | 1568..1726 | + | 159 | WP_000829588.1 | hypothetical protein | - |
| JMW01_RS25865 () | 1781..2050 | + | 270 | WP_000079932.1 | hypothetical protein | Antitoxin Detail |
| JMW01_RS25870 () | 2047..2328 | + | 282 | WP_000969997.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JMW01_RS25875 () | 2524..2865 | - | 342 | WP_000578011.1 | hypothetical protein | - |
| JMW01_RS25880 () | 3165..3752 | + | 588 | WP_001418189.1 | serine acetyltransferase | - |
| JMW01_RS25885 () | 4034..4627 | - | 594 | WP_001401779.1 | hypothetical protein | - |
| JMW01_RS25890 () | 4981..6326 | + | 1346 | Protein_7 | hypothetical protein | - |
| JMW01_RS25895 () | 6853..7155 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| JMW01_RS25900 () | 7152..7778 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| JMW01_RS25905 () | 7982..9253 | - | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| JMW01_RS25910 () | 9253..9690 | - | 438 | WP_000109062.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JMW01_RS25915 () | 9687..9935 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| JMW01_RS25920 () | 10354..11256 | + | 903 | WP_064670763.1 | DUF1281 domain-containing protein | - |
| JMW01_RS25925 () | 11253..11565 | + | 313 | Protein_14 | hypothetical protein | - |
| JMW01_RS25930 () | 11641..12324 | + | 684 | WP_001401756.1 | DNA methylase | - |
| JMW01_RS25935 () | 12325..12546 | + | 222 | WP_001104871.1 | hypothetical protein | - |
| JMW01_RS25940 () | 12440..12994 | + | 555 | WP_077635412.1 | DUF1380 family protein | - |
| JMW01_RS25945 () | 13039..13814 | + | 776 | Protein_18 | hypothetical protein | - |
| JMW01_RS25950 () | 14352..14654 | + | 303 | WP_001666994.1 | antirestriction protein | - |
| JMW01_RS25955 () | 14701..15123 | + | 423 | WP_013307864.1 | DUF1380 family protein | - |
| JMW01_RS25960 () | 15120..15311 | + | 192 | WP_001703906.1 | hypothetical protein | - |
| JMW01_RS25965 () | 15644..15712 | - | 69 | Protein_22 | pilus protein | - |
| JMW01_RS25970 () | 16081..16608 | + | 528 | WP_001760699.1 | single-stranded DNA-binding protein | - |
| JMW01_RS25975 () | 16666..16899 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| JMW01_RS25980 () | 16958..18916 | + | 1959 | WP_064670764.1 | ParB/RepB/Spo0J family partition protein | - |
| JMW01_RS25985 () | 18971..19405 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| JMW01_RS25990 () | 19402..20121 | + | 720 | WP_001276268.1 | plasmid SOS inhibition protein A | - |
| JMW01_RS25995 () | 20118..20714 | + | 597 | WP_001401763.1 | hypothetical protein | - |
| JMW01_RS26000 () | 21176..21676 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| JMW01_RS26005 () | 21816..22211 | - | 396 | WP_162886172.1 | hypothetical protein | - |
| JMW01_RS26010 () | 22409..22843 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| JMW01_RS26015 () | 22936..23202 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| JMW01_RS26020 () | 23379..23768 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| JMW01_RS26025 () | 23765..24679 | + | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| JMW01_RS26030 () | 24679..24924 | + | 246 | WP_180496387.1 | hypothetical protein | - |
| JMW01_RS26035 () | 24955..25206 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| JMW01_RS26040 () | 25786..26634 | + | 849 | WP_199397367.1 | DUF4942 domain-containing protein | - |
| JMW01_RS26045 () | 26720..27055 | - | 336 | WP_000157090.1 | hypothetical protein | - |
| JMW01_RS26050 () | 27288..27620 | + | 333 | WP_001291057.1 | hypothetical protein | - |
| JMW01_RS26055 () | 27632..30352 | + | 2721 | WP_000991405.1 | Protein TraI | Relaxase |
| JMW01_RS26060 () | 30573..32873 | - | 2301 | WP_013307869.1 | TraM recognition domain-containing protein | - |
| JMW01_RS26065 () | 32854..33978 | - | 1125 | WP_000152382.1 | DsbC family protein | - |
| JMW01_RS26070 () | 33975..35255 | - | 1281 | WP_052973421.1 | IncI1-type conjugal transfer protein TrbA | - |
| JMW01_RS26075 () | 35896..36147 | + | 252 | WP_001081067.1 | hypothetical protein | - |
| JMW01_RS26080 () | 36210..36386 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| JMW01_RS26085 () | 36536..37003 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| JMW01_RS26090 () | 37162..37785 | + | 624 | WP_001155247.1 | DNA-binding protein | - |
| JMW01_RS26095 () | 37983..38198 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| JMW01_RS26100 () | 38202..38570 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| JMW01_RS26105 () | 38582..38773 | - | 192 | WP_000751583.1 | hypothetical protein | - |
| JMW01_RS26110 () | 38861..39103 | - | 243 | WP_000650923.1 | hypothetical protein | - |
| JMW01_RS26115 () | 39433..39585 | + | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| JMW01_RS26120 () | 39723..41309 | - | 1587 | WP_000004564.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| JMW01_RS26125 () | 41583..42236 | - | 654 | WP_001401768.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| JMW01_RS26130 () | 42324..44489 | - | 2166 | WP_000691808.1 | DotA/TraY family protein | - |
| JMW01_RS26135 () | 44564..45133 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| JMW01_RS26140 () | 45130..46335 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| JMW01_RS26145 () | 46293..46913 | - | 621 | WP_000286854.1 | hypothetical protein | - |
| JMW01_RS26150 () | 46913..49957 | - | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| JMW01_RS26155 () | 50252..51070 | - | 819 | WP_000753550.1 | hypothetical protein | - |
| JMW01_RS26160 () | 50985..51236 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| JMW01_RS26165 () | 51293..51691 | - | 399 | WP_000088812.1 | hypothetical protein | - |
| JMW01_RS26170 () | 51738..52265 | - | 528 | WP_001407937.1 | conjugal transfer protein TraQ | - |
| JMW01_RS26175 () | 52265..52978 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| JMW01_RS26180 () | 52975..54312 | - | 1338 | WP_013307873.1 | conjugal transfer protein TraO | - |
| JMW01_RS26185 () | 54316..55290 | - | 975 | WP_000547383.1 | hypothetical protein | VF |
| JMW01_RS26190 () | 55301..55996 | - | 696 | WP_001681668.1 | DotI/IcmL family type IV secretion protein | - |
| JMW01_RS26195 () | 56008..56358 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| JMW01_RS26200 () | 56375..60436 | - | 4062 | WP_201511059.1 | DNA primase | - |
| JMW01_RS26205 () | 60790..61371 | - | 582 | WP_025750394.1 | hypothetical protein | - |
| JMW01_RS26210 () | 61603..61893 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| JMW01_RS26215 () | 61890..63038 | - | 1149 | WP_013307876.1 | putative protein YggR | VF |
| JMW01_RS26220 () | 63022..63858 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| JMW01_RS26225 () | 63855..64313 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| JMW01_RS26230 () | 64417..65619 | - | 1203 | WP_013307879.1 | conjugal transfer protein TraF | - |
| JMW01_RS26235 () | 65721..66542 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| JMW01_RS26240 () | 66755..67879 | - | 1125 | WP_013307880.1 | site-specific integrase | - |
| JMW01_RS26245 () | 67934..68332 | + | 399 | WP_113367734.1 | phage tail protein | - |
| JMW01_RS26250 () | 68337..68576 | - | 240 | WP_000271302.1 | hypothetical protein | - |
| JMW01_RS26255 () | 68731..68928 | + | 198 | WP_001356717.1 | hypothetical protein | - |
| JMW01_RS26260 () | 69502..70737 | - | 1236 | WP_085008799.1 | hypothetical protein | VF |
| JMW01_RS26265 () | 70755..71381 | - | 627 | WP_013307883.1 | prepilin peptidase | - |
| JMW01_RS26270 () | 71397..71882 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| JMW01_RS26275 () | 71927..72463 | - | 537 | WP_000111521.1 | hypothetical protein | VF |
| JMW01_RS26280 () | 72525..73619 | - | 1095 | WP_000697154.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| JMW01_RS26285 () | 73621..75129 | - | 1509 | WP_000880806.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| JMW01_RS26290 () | 75232..75690 | - | 459 | WP_000095887.1 | hypothetical protein | VF |
| JMW01_RS26295 () | 75680..76975 | - | 1296 | WP_000129885.1 | type 4b pilus protein PilO2 | - |
| JMW01_RS26300 () | 76996..78615 | - | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| JMW01_RS26305 () | 78647..79084 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| JMW01_RS26310 () | 79088..80158 | - | 1071 | WP_000730430.1 | hypothetical protein | VF |
| JMW01_RS26315 () | 80385..80720 | - | 336 | WP_001335624.1 | hypothetical protein | - |
| JMW01_RS26320 () | 80837..81154 | - | 318 | WP_001330559.1 | PilI type IV pilus biogenesis protein | - |
| JMW01_RS26325 () | 81160..82854 | - | 1695 | WP_000482665.1 | flotillin family protein | - |
| JMW01_RS26330 () | 82881..83501 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| JMW01_RS26335 () | 83768..84430 | - | 663 | WP_000154142.1 | hypothetical protein | - |
| JMW01_RS26340 () | 84571..85212 | - | 642 | WP_000335849.1 | transcription termination factor NusG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|