MGE detailed information
MGE type: Genomic_island MGE length: 13875 bp
Accession: NZ_LR883965 Location: 3249050..3262924 Organism: Escherichia coli isolate 2016-17-550 Replicon: chromosome
Accession: NZ_LR883965 Location: 3249050..3262924 Organism: Escherichia coli isolate 2016-17-550 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMV10_RS15320 () | 3244245..3245447 | + | 1203 | WP_000439180.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| JMV10_RS15325 () | 3245763..3246815 | - | 1053 | WP_001028905.1 | DUF2776 domain-containing protein | - |
| JMV10_RS15330 () | 3247199..3248788 | + | 1590 | WP_000862320.1 | DUF4049 domain-containing protein | - |
| JMV10_RS15335 () | 3249050..3250672 | + | 1623 | WP_001307442.1 | DUF4049 domain-containing protein | - |
| JMV10_RS15340 () | 3251038..3252105 | + | 1068 | WP_000361485.1 | HlyD family secretion protein | - |
| JMV10_RS15345 () | 3252102..3254837 | + | 2736 | WP_094315445.1 | Ribosome-associated ATPase | VF |
| JMV10_RS15350 () | 3254837..3255961 | + | 1125 | WP_001314210.1 | ABC transporter permease | - |
| JMV10_RS15355 () | 3256034..3256309 | + | 276 | WP_001259385.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| JMV10_RS15360 () | 3256306..3256665 | + | 360 | WP_000593554.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| JMV10_RS15365 () | 3256715..3257575 | - | 861 | WP_001131783.1 | class II aldolase | - |
| JMV10_RS15370 () | 3257607..3257876 | - | 270 | WP_000933060.1 | HPr family phosphocarrier protein | - |
| JMV10_RS15375 () | 3257866..3259374 | - | 1509 | WP_001298718.1 | carbohydrate kinase | - |
| JMV10_RS15380 () | 3259367..3260725 | - | 1359 | WP_001298729.1 | PTS galactitol transporter subunit IIC | - |
| JMV10_RS15385 () | 3260802..3261083 | - | 282 | WP_000084022.1 | PTS sugar transporter subunit IIB | - |
| JMV10_RS15390 () | 3261080..3261553 | - | 474 | WP_001161553.1 | PTS sugar transporter subunit IIA | - |
| JMV10_RS15395 () | 3261578..3262324 | - | 747 | WP_000839066.1 | GntR family transcriptional regulator | - |
| JMV10_RS15400 () | 3262523..3262924 | - | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| JMV10_RS15405 () | 3262930..3263736 | - | 807 | WP_000173666.1 | nickel import ATP-binding protein NikE | - |
| JMV10_RS15410 () | 3263733..3264497 | - | 765 | WP_001136236.1 | nickel import ATP-binding protein NikD | - |
| JMV10_RS15415 () | 3264497..3265330 | - | 834 | WP_001008963.1 | nickel ABC transporter permease subunit NikC | - |
| JMV10_RS15420 () | 3265327..3266271 | - | 945 | WP_000947068.1 | nickel ABC transporter permease subunit NikB | - |
| JMV10_RS15425 () | 3266271..3267845 | - | 1575 | WP_000953353.1 | nickel ABC transporter substrate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|