MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 51418 bp
Accession: NZ_LR883054 Location: 1..51418 Organism: Escherichia coli isolate L1_E925 Replicon: plasmid 5
Accession: NZ_LR883054 Location: 1..51418 Organism: Escherichia coli isolate L1_E925 Replicon: plasmid 5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JL017_RS25230 () | 1..858 | + | 858 | WP_001393355.1 | incFII family plasmid replication initiator RepA | - |
| JL017_RS25235 () | 1829..2140 | + | 312 | WP_000483538.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JL017_RS25240 () | 2140..2427 | + | 288 | WP_000865086.1 | helix-turn-helix transcriptional regulator | - |
| JL017_RS25245 () | 2804..3313 | + | 510 | WP_000115001.1 | peptide deformylase | - |
| JL017_RS25250 () | 3328..3429 | + | 102 | Protein_5 | methionyl-tRNA formyltransferase | - |
| JL017_RS25255 () | 3618..3836 | - | 219 | Protein_6 | IS91 family transposase | - |
| JL017_RS25260 () | 3923..4168 | + | 246 | Protein_7 | IS630 family transposase | - |
| JL017_RS25265 () | 4230..5174 | - | 945 | WP_001420717.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| JL017_RS25270 () | 5239..6189 | - | 951 | WP_001699589.1 | virulence factor VirK | - |
| JL017_RS25275 () | 6194..7282 | - | 1089 | WP_004100285.1 | putative hexosyltransferase CapU | - |
| JL017_RS25280 () | 7285..8127 | - | 843 | WP_160371899.1 | polysaccharide deacetylase family protein | - |
| JL017_RS25285 () | 8371..8901 | - | 531 | WP_011387704.1 | hypothetical protein | - |
| JL017_RS25290 () | 8901..9158 | - | 258 | WP_000343092.1 | hypothetical protein | - |
| JL017_RS25295 () | 9603..9821 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| JL017_RS25300 () | 9823..10128 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JL017_RS25305 () | 10129..10842 | + | 714 | WP_000016957.1 | site-specific integrase | - |
| JL017_RS25310 () | 11172..11813 | + | 642 | WP_000470631.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| JL017_RS25315 () | 12253..12933 | - | 681 | WP_000452091.1 | EAL domain-containing protein | - |
| JL017_RS25320 () | 13181..13884 | + | 704 | Protein_19 | helix-turn-helix domain-containing protein | - |
| JL017_RS25325 () | 14227..18320 | - | 4094 | Protein_20 | Serine protease EatA | VF |
| JL017_RS25330 () | 19086..19447 | - | 362 | Protein_21 | Tn3 family transposase | - |
| JL017_RS25335 () | 19548..19787 | + | 240 | WP_001355715.1 | IS3 family transposase ISBope1 | Transposase |
| JL017_RS25340 () | 19816..20513 | + | 698 | Protein_23 | IS1 family transposase | - |
| JL017_RS25345 () | 20697..20844 | + | 148 | Protein_24 | resolvase | - |
| JL017_RS25350 () | 21342..22022 | - | 681 | WP_000452091.1 | EAL domain-containing protein | - |
| JL017_RS25355 () | 22270..22973 | + | 704 | Protein_26 | helix-turn-helix domain-containing protein | - |
| JL017_RS25360 () | 23316..27408 | - | 4093 | Protein_27 | serine protease autotransporter toxin EatA | - |
| JL017_RS25365 () | 28174..28535 | - | 362 | Protein_28 | Tn3 family transposase | - |
| JL017_RS25370 () | 28636..28875 | + | 240 | WP_001355715.1 | IS3 family transposase ISBope1 | Transposase |
| JL017_RS25375 () | 28904..29601 | + | 698 | Protein_30 | IS1 family transposase | - |
| JL017_RS25380 () | 29997..30215 | + | 219 | WP_000862856.1 | hypothetical protein | - |
| JL017_RS25385 () | 30283..30402 | - | 120 | Protein_32 | transposase domain-containing protein | - |
| JL017_RS25390 () | 30604..31584 | + | 981 | WP_001218105.1 | plasmid segregation protein ParM | - |
| JL017_RS25395 () | 31587..32009 | + | 423 | WP_000774834.1 | plasmid partitioning/stability family protein | - |
| JL017_RS25400 () | 32033..32254 | + | 222 | WP_071597655.1 | hypothetical protein | - |
| JL017_RS25405 () | 32352..33368 | + | 1017 | WP_001365314.1 | IS110 family transposase ISShdy1 | Transposase |
| JL017_RS25410 () | 33458..33823 | + | 366 | WP_173673366.1 | class I SAM-dependent methyltransferase | - |
| JL017_RS25415 () | 33909..34139 | - | 231 | Protein_38 | hypothetical protein | - |
| JL017_RS25420 () | 34172..35785 | - | 1614 | WP_000080200.1 | IS66 family transposase ISEc23 | Transposase |
| JL017_RS25425 () | 35816..36166 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| JL017_RS25430 () | 36163..36588 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| JL017_RS25435 () | 36674..36881 | - | 208 | Protein_42 | hypothetical protein | - |
| JL017_RS25440 () | 37183..37302 | + | 120 | Protein_43 | single-stranded DNA-binding protein | - |
| JL017_RS25445 () | 37299..37799 | + | 501 | Protein_44 | plasmid SOS inhibition protein A | - |
| JL017_RS25450 () | 37796..38110 | + | 315 | WP_000872087.1 | hypothetical protein | - |
| - () | 38059..38252 | + | 194 | NuclAT_0 | - | - |
| - () | 38059..38252 | + | 194 | NuclAT_0 | - | - |
| - () | 38059..38252 | + | 194 | NuclAT_0 | - | - |
| - () | 38059..38252 | + | 194 | NuclAT_0 | - | - |
| JL017_RS25455 () | 38318..38479 | + | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | - |
| JL017_RS25460 () | 38828..38932 | + | 105 | Protein_47 | IS66 family insertion sequence element accessory protein TnpB | - |
| JL017_RS25465 () | 38993..39772 | - | 780 | WP_001297096.1 | IS21 family transposase IS100kyp | Transposase |
| JL017_RS25470 () | 39772..40794 | - | 1023 | WP_001295213.1 | IS21 family transposase IS100kyp | Transposase |
| JL017_RS25475 () | 40880..41437 | + | 558 | Protein_50 | IS66 family transposase IS679 | Transposase |
| JL017_RS25480 () | 41437..41784 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| JL017_RS25485 () | 41804..43375 | + | 1572 | WP_200991755.1 | IS66 family transposase IS679 | Transposase |
| JL017_RS25490 () | 43379..43566 | - | 188 | Protein_53 | pilus assembly protein | - |
| JL017_RS25495 () | 43981..44274 | - | 294 | WP_011387699.1 | hypothetical protein | - |
| JL017_RS25500 () | 44194..44409 | + | 216 | WP_001417266.1 | hypothetical protein | - |
| JL017_RS25505 () | 44369..44611 | + | 243 | WP_000540593.1 | hypothetical protein | - |
| JL017_RS25510 () | 44907..45167 | + | 261 | WP_000128787.1 | hypothetical protein | - |
| JL017_RS25515 () | 45328..45489 | - | 162 | Protein_58 | IS3 family transposase | - |
| JL017_RS25520 () | 45593..46013 | - | 421 | Protein_59 | hypothetical protein | VF |
| JL017_RS25525 () | 46485..46871 | + | 387 | WP_001137405.1 | relaxosome protein TraM | - |
| JL017_RS25530 () | 47350..47631 | + | 282 | WP_000974580.1 | hypothetical protein | - |
| JL017_RS25535 () | 47847..48014 | + | 168 | WP_157187929.1 | hypothetical protein | - |
| JL017_RS25540 () | 48111..48470 | + | 360 | WP_001054220.1 | type IV conjugative transfer system pilin TraA | - |
| JL017_RS25545 () | 48472..48777 | + | 306 | WP_000016323.1 | type IV conjugative transfer system protein TraL | - |
| JL017_RS25550 () | 48797..49360 | + | 564 | WP_000406020.1 | type IV conjugative transfer system protein TraE | - |
| JL017_RS25555 () | 49545..49946 | + | 402 | WP_173424386.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| JL017_RS25560 () | 50171..50353 | - | 183 | WP_001393357.1 | hypothetical protein | - |
| JL017_RS25565 () | 50859..51116 | + | 258 | WP_000083823.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|