MGE detailed information
MGE type: Mobilizable plasmid MGE length: 82314 bp
Accession: NZ_LR883053 Location: 1..82314 Organism: Escherichia coli isolate L1_E925 Replicon: plasmid 4
Accession: NZ_LR883053 Location: 1..82314 Organism: Escherichia coli isolate L1_E925 Replicon: plasmid 4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JL017_RS24750 () | 46..1077 | + | 1032 | WP_000907853.1 | replication initiation protein | - |
| JL017_RS24755 () | 1773..1931 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| JL017_RS24760 () | 1986..2255 | + | 270 | WP_001395444.1 | hypothetical protein | - |
| JL017_RS24765 () | 2252..2426 | + | 175 | Protein_3 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JL017_RS24770 () | 2474..3172 | + | 699 | WP_001393578.1 | hypothetical protein | - |
| JL017_RS24775 () | 3503..4507 | - | 1005 | Protein_5 | IS110 family transposase ISSfl8 | Transposase |
| JL017_RS24780 () | 4577..5456 | + | 880 | Protein_6 | IS3 family transposase ISKpn38 | Transposase |
| JL017_RS24785 () | 5415..5594 | - | 180 | WP_001039240.1 | IS3 family transposase IS1203 | Transposase |
| JL017_RS24790 () | 5851..6567 | + | 717 | WP_001393302.1 | hypothetical protein | VF |
| JL017_RS24795 () | 6618..7133 | + | 516 | WP_000768757.1 | CS1 fimbrial subunit A | VF |
| JL017_RS24800 () | 7215..9832 | + | 2618 | Protein_10 | hypothetical protein | VF |
| JL017_RS24805 () | 9829..10920 | + | 1092 | WP_000718015.1 | CFA/I fimbrial subunit E | VF |
| JL017_RS24810 () | 11608..12707 | - | 1100 | Protein_12 | IS3 family transposase IS2 | Transposase |
| JL017_RS24815 () | 12754..13533 | - | 780 | WP_001297096.1 | IS21 family transposase IS100kyp | Transposase |
| JL017_RS24820 () | 13533..14555 | - | 1023 | WP_001295213.1 | IS21 family transposase IS100kyp | Transposase |
| JL017_RS24825 () | 14643..14795 | - | 153 | Protein_15 | IS3 family transposase IS2 | Transposase |
| JL017_RS24830 () | 14908..15333 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| JL017_RS24835 () | 15330..15680 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| JL017_RS24840 () | 15711..17324 | + | 1614 | WP_000080200.1 | IS66 family transposase ISEc23 | Transposase |
| JL017_RS24845 () | 17525..17910 | - | 386 | Protein_19 | hypothetical protein | - |
| JL017_RS24850 () | 17867..18121 | - | 255 | Protein_20 | group II intron reverse transcriptase/maturase | - |
| JL017_RS24855 () | 18114..18329 | + | 216 | WP_200991728.1 | hypothetical protein | - |
| JL017_RS24860 () | 18272..18625 | + | 354 | WP_200991731.1 | hypothetical protein | - |
| JL017_RS24865 () | 18651..19390 | + | 740 | Protein_23 | IS3 family transposase IS1203 | Transposase |
| JL017_RS24870 () | 20063..21571 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| JL017_RS24875 () | 21661..22134 | + | 474 | Protein_25 | IS3 family transposase IS629 | Transposase |
| JL017_RS24880 () | 22176..22466 | + | 291 | Protein_26 | group II intron reverse transcriptase/maturase | - |
| JL017_RS24885 () | 22534..22713 | + | 180 | Protein_27 | transposase domain-containing protein | - |
| JL017_RS24890 () | 23137..23340 | - | 204 | WP_013188517.1 | ANR family transcriptional regulator | - |
| JL017_RS24895 () | 23550..23983 | + | 434 | Protein_29 | HTH-type transcriptional activator CsvR | - |
| JL017_RS24900 () | 24017..24256 | + | 240 | Protein_30 | IS5 family transposase ISPan1 | Transposase |
| JL017_RS24905 () | 24441..25122 | + | 682 | Protein_31 | IS1 family transposase IS1N | Transposase |
| JL017_RS24910 () | 25424..25792 | + | 369 | WP_011387710.1 | hypothetical protein | - |
| JL017_RS24915 () | 25981..27091 | - | 1111 | Protein_33 | IS4 family transposase IS186B | Transposase |
| JL017_RS24920 () | 27407..28267 | - | 861 | WP_000588732.1 | Right origin-binding protein | VF |
| JL017_RS24925 () | 28543..28761 | + | 219 | Protein_35 | IS481 family transposase ISErsp1 | Transposase |
| JL017_RS24930 () | 28709..29092 | - | 384 | WP_000762576.1 | hypothetical protein | - |
| JL017_RS24935 () | 29211..29558 | + | 348 | WP_000142434.1 | hypothetical protein | - |
| JL017_RS24940 () | 29576..30166 | - | 591 | WP_012000738.1 | hypothetical protein | - |
| JL017_RS24945 () | 30769..32907 | + | 2139 | WP_000350636.1 | AAA family ATPase | - |
| JL017_RS24950 () | 33069..33485 | - | 417 | WP_001044769.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JL017_RS24955 () | 33482..33712 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| JL017_RS24960 () | 34271..34684 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| JL017_RS24965 () | 34686..35471 | + | 786 | WP_001164207.1 | site-specific integrase | - |
| JL017_RS24970 () | 36073..36705 | + | 633 | WP_000312331.1 | ParA family protein | - |
| JL017_RS24975 () | 36705..37079 | + | 375 | WP_000752652.1 | hypothetical protein | - |
| JL017_RS24980 () | 37318..38292 | + | 975 | WP_001217833.1 | hypothetical protein | - |
| JL017_RS24985 () | 38296..38688 | + | 393 | WP_000272015.1 | plasmid partitioning/stability family protein | - |
| JL017_RS24990 () | 38829..38951 | - | 123 | Protein_48 | DinI family protein | - |
| JL017_RS24995 () | 40284..40718 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| JL017_RS25000 () | 40812..41078 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| JL017_RS25005 () | 41143..42069 | + | 927 | WP_000038402.1 | ISNCY family transposase ISRor2 | VF |
| JL017_RS25010 () | 42092..42289 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| JL017_RS25015 () | 42320..42571 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| JL017_RS25020 () | 42605..42802 | - | 198 | WP_001161115.1 | hypothetical protein | - |
| JL017_RS25025 () | 43151..43998 | + | 848 | Protein_55 | DUF4942 domain-containing protein | - |
| JL017_RS25030 () | 44084..44419 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| JL017_RS25035 () | 44653..44985 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| JL017_RS25040 () | 44996..47695 | + | 2700 | WP_013188526.1 | hypothetical protein | Relaxase |
| JL017_RS25045 () | 47732..48028 | - | 297 | WP_047648513.1 | hypothetical protein | - |
| JL017_RS25050 () | 48335..48919 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| JL017_RS25055 () | 48979..50181 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| JL017_RS25060 () | 50266..51089 | - | 824 | Protein_62 | conjugal transfer protein TraE | - |
| JL017_RS25065 () | 51240..52394 | - | 1155 | WP_001139957.1 | integrase | - |
| JL017_RS25070 () | 53204..54545 | - | 1342 | Protein_64 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| JL017_RS25075 () | 54537..54822 | + | 286 | Protein_65 | transposase | - |
| JL017_RS25080 () | 55071..55322 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| JL017_RS25085 () | 55356..55553 | - | 198 | WP_001161115.1 | hypothetical protein | - |
| JL017_RS25090 () | 55902..56750 | + | 849 | WP_001393429.1 | DUF4942 domain-containing protein | - |
| JL017_RS25095 () | 56836..57171 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| JL017_RS25100 () | 57405..57737 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| JL017_RS25105 () | 57748..60447 | + | 2700 | WP_013188526.1 | hypothetical protein | Relaxase |
| JL017_RS25110 () | 60484..60780 | - | 297 | WP_047648513.1 | hypothetical protein | - |
| JL017_RS25115 () | 61087..61671 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| JL017_RS25120 () | 61731..62933 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| JL017_RS25125 () | 63018..63842 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| JL017_RS25130 () | 63993..65147 | - | 1155 | WP_001139957.1 | integrase | - |
| JL017_RS25135 () | 65956..67290 | - | 1335 | WP_024132209.1 | hypothetical protein | VF |
| JL017_RS25140 () | 67290..67946 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| JL017_RS25145 () | 67931..68491 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| JL017_RS25150 () | 68501..69115 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| JL017_RS25155 () | 69133..70230 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| JL017_RS25160 () | 70243..71796 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| JL017_RS25165 () | 71807..72259 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| JL017_RS25170 () | 72246..73541 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| JL017_RS25175 () | 73534..75216 | - | 1683 | WP_001393544.1 | hypothetical protein | VF |
| JL017_RS25180 () | 75230..75667 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| JL017_RS25185 () | 75667..76734 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| JL017_RS25190 () | 77408..77860 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| JL017_RS25195 () | 77903..78157 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| JL017_RS25200 () | 78425..78991 | - | 567 | WP_000776428.1 | hypothetical protein | - |
| JL017_RS25205 () | 79005..79688 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| JL017_RS25210 () | 79943..80476 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| JL017_RS25215 () | 80918..81205 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| JL017_RS25220 () | 81123..81386 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|