MGE detailed information
MGE type: Conjugative plasmid MGE length: 116803 bp
Accession: NZ_LR883051 Location: 1..116803 Organism: Escherichia coli isolate L1_E925 Replicon: plasmid 2
Accession: NZ_LR883051 Location: 1..116803 Organism: Escherichia coli isolate L1_E925 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JL017_RS23560 () | 1..858 | + | 858 | WP_000130971.1 | incFII family plasmid replication initiator RepA | - |
| JL017_RS23565 () | 1772..2584 | + | 813 | WP_001393437.1 | hypothetical protein | - |
| JL017_RS23570 () | 2588..4159 | - | 1572 | WP_200991643.1 | IS66 family transposase IS679 | Transposase |
| JL017_RS23575 () | 4179..4526 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| JL017_RS23580 () | 4526..5203 | - | 678 | WP_200991646.1 | IS66 family transposase ISCro1 | Transposase |
| JL017_RS23585 () | 5244..5471 | + | 228 | WP_140159966.1 | hypothetical protein | - |
| JL017_RS23600 () | 7840..8031 | + | 192 | WP_122994480.1 | ANR family transcriptional regulator | - |
| JL017_RS23610 () | 9740..10120 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| JL017_RS23615 () | 10117..10464 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| JL017_RS23620 () | 10514..12052 | + | 1539 | WP_001394809.1 | IS66 family transposase ISEc8 | Transposase |
| JL017_RS23625 () | 12100..12267 | + | 168 | Protein_14 | IS91 family transposase ISSbo1 | Transposase |
| JL017_RS23630 () | 12329..13515 | - | 1187 | Protein_15 | IS3 family transposase ISKpn38 | Transposase |
| JL017_RS23635 () | 13597..13842 | + | 246 | Protein_16 | transposase | - |
| JL017_RS23640 () | 13904..14848 | - | 945 | WP_001420717.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| JL017_RS23645 () | 14913..15862 | - | 950 | Protein_18 | virulence factor VirK | - |
| JL017_RS23650 () | 15867..16955 | - | 1089 | WP_004100285.1 | putative hexosyltransferase CapU | - |
| JL017_RS23655 () | 16958..17800 | - | 843 | WP_160371899.1 | polysaccharide deacetylase family protein | - |
| JL017_RS23660 () | 18044..18565 | - | 522 | WP_044307843.1 | hypothetical protein | - |
| JL017_RS23665 () | 18565..18822 | - | 258 | WP_000343095.1 | hypothetical protein | - |
| JL017_RS23670 () | 19344..19562 | + | 219 | WP_000829078.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| JL017_RS23675 () | 19564..19869 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JL017_RS23680 () | 19870..20676 | + | 807 | WP_000016960.1 | site-specific integrase | - |
| JL017_RS23685 () | 20854..21498 | + | 645 | WP_001144037.1 | ParA family protein | - |
| JL017_RS23690 () | 21585..21893 | + | 309 | WP_000030204.1 | molecular chaperone GroEL | - |
| JL017_RS23695 () | 22137..23708 | - | 1572 | WP_024181021.1 | IS66 family transposase ISCro1 | Transposase |
| JL017_RS23700 () | 23728..24075 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| JL017_RS23705 () | 24075..24752 | - | 678 | WP_001704819.1 | IS66 family transposase ISCro1 | Transposase |
| JL017_RS23710 () | 24813..26040 | + | 1228 | Protein_31 | IS66 family transposase | - |
| JL017_RS23715 () | 26293..27422 | - | 1130 | Protein_32 | IS110 family transposase ISEc45 | Transposase |
| JL017_RS23720 () | 27483..27659 | + | 177 | Protein_33 | transposase domain-containing protein | - |
| JL017_RS23725 () | 27741..28906 | + | 1166 | Protein_34 | IS21 family transposase IS21 | Transposase |
| JL017_RS23730 () | 28906..29703 | + | 798 | WP_000544814.1 | IS21 family transposase IS21 | Transposase |
| JL017_RS23735 () | 29830..30082 | + | 253 | Protein_36 | transposase | - |
| JL017_RS23740 () | 30561..31286 | + | 726 | WP_001391304.1 | Chaperone protein caf1M | VF |
| JL017_RS23745 () | 31252..33705 | + | 2454 | WP_001391303.1 | F1 capsule-anchoring protein | VF |
| JL017_RS23750 () | 33825..34313 | + | 489 | WP_000738231.1 | hypothetical protein | - |
| JL017_RS23755 () | 34335..34841 | + | 507 | WP_013188494.1 | CS3 fimbrial subunit A | VF |
| JL017_RS23760 () | 35233..35487 | + | 255 | WP_001342360.1 | IS3 family transposase ISPa31 | Transposase |
| JL017_RS23765 () | 35655..36020 | + | 366 | WP_000124138.1 | hypothetical protein | - |
| JL017_RS23770 () | 36020..36852 | + | 833 | Protein_43 | IS91 family transposase IS91 | Transposase |
| JL017_RS23775 () | 37126..37823 | + | 698 | Protein_44 | IS1 family transposase IS1G | Transposase |
| JL017_RS23780 () | 37946..38139 | - | 194 | Protein_45 | ANR family transcriptional regulator | - |
| JL017_RS23785 () | 38338..39135 | + | 798 | WP_047660784.1 | CFA/I fimbrial subunit D | VF |
| JL017_RS23790 () | 39504..40336 | - | 833 | Protein_47 | IS91 family transposase IS91 | Transposase |
| JL017_RS23795 () | 40336..40701 | - | 366 | WP_000124138.1 | hypothetical protein | - |
| JL017_RS23800 () | 40748..41566 | + | 819 | Protein_49 | IS630 family transposase | - |
| JL017_RS23805 () | 42125..43255 | + | 1131 | WP_077778411.1 | ABC transporter permease | - |
| JL017_RS23810 () | 43252..44454 | + | 1203 | WP_001394311.1 | TolC family protein | - |
| JL017_RS23815 () | 44417..45184 | + | 768 | WP_001394312.1 | hypothetical protein | - |
| JL017_RS23820 () | 45177..45803 | + | 627 | WP_000593828.1 | ABC transporter ATP-binding protein | - |
| JL017_RS23825 () | 45985..47148 | + | 1164 | Protein_54 | IS3 family transposase ISEc17 | Transposase |
| JL017_RS23830 () | 47652..48886 | + | 1235 | WP_164968891.1 | IS3 family transposase IS2 | Transposase |
| JL017_RS23835 () | 49027..49383 | + | 357 | WP_013188496.1 | hypothetical protein | - |
| JL017_RS23840 () | 49545..49790 | + | 246 | Protein_57 | IS256 family transposase IS1414 | Transposase |
| JL017_RS23845 () | 49857..51020 | + | 1164 | Protein_58 | IS3 family transposase ISEc17 | Transposase |
| JL017_RS23850 () | 51289..52533 | + | 1245 | WP_001416764.1 | hypothetical protein | - |
| JL017_RS23855 () | 52605..52979 | - | 375 | Protein_60 | IS1 family transposase IS1N | Transposase |
| JL017_RS23860 () | 53032..54195 | - | 1164 | Protein_61 | IS3 family transposase ISEc17 | Transposase |
| JL017_RS23865 () | 54223..55406 | - | 1184 | Protein_62 | IS91 family transposase | - |
| JL017_RS23870 () | 55406..55771 | - | 366 | WP_000124092.1 | hypothetical protein | - |
| JL017_RS23875 () | 55853..56461 | + | 609 | Protein_64 | IS3 family transposase IS2 | Transposase |
| JL017_RS23880 () | 56664..58475 | + | 1812 | WP_001393122.1 | Heme/hemopexin transporter protein HuxB | VF |
| JL017_RS23885 () | 58565..63199 | + | 4635 | WP_200991637.1 | filamentous hemagglutinin N-terminal domain-containing protein | - |
| JL017_RS23890 () | 63224..63409 | + | 186 | WP_000894830.1 | hypothetical protein | - |
| JL017_RS23895 () | 63481..65394 | + | 1914 | WP_001393184.1 | UDP-glucose:protein N-beta-glucosyltransferase | VF |
| JL017_RS23900 () | 65391..65885 | + | 495 | WP_001203081.1 | DUF2919 family protein | - |
| JL017_RS23905 () | 65954..66181 | - | 228 | Protein_70 | IS21 family transposase ISEc12 | Transposase |
| JL017_RS23910 () | 66278..66451 | - | 174 | WP_044307862.1 | transposase domain-containing protein | - |
| JL017_RS23915 () | 66448..67656 | - | 1209 | WP_000343720.1 | IS256 family transposase IS1414 | Transposase |
| JL017_RS23920 () | 67786..68790 | - | 1005 | Protein_73 | IS110 family transposase ISShdy1 | Transposase |
| JL017_RS23925 () | 68894..69242 | - | 349 | Protein_74 | hypothetical protein | - |
| JL017_RS23930 () | 69257..70219 | + | 963 | WP_000959870.1 | plasmid segregation protein ParM | - |
| JL017_RS23935 () | 70222..70572 | + | 351 | WP_001393279.1 | plasmid partitioning/stability family protein | - |
| JL017_RS23940 () | 70639..71583 | - | 945 | WP_000710536.1 | hypothetical protein | - |
| JL017_RS23945 () | 71906..72187 | - | 282 | WP_000780221.1 | helix-turn-helix transcriptional regulator | - |
| JL017_RS23950 () | 72168..72497 | - | 330 | WP_000471255.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JL017_RS23955 () | 72690..73109 | - | 420 | Protein_80 | IS3 family transposase ISBmu11 | Transposase |
| JL017_RS23960 () | 73486..73704 | + | 219 | WP_013188501.1 | Heat-stable enterotoxin A3/A4 | VF |
| JL017_RS23965 () | 73855..74061 | + | 207 | Protein_82 | IS5 family transposase IS903B | Transposase |
| JL017_RS23970 () | 74327..74521 | - | 195 | Protein_83 | transposase domain-containing protein | - |
| JL017_RS23975 () | 74582..75448 | + | 867 | Protein_84 | IS110 family transposase ISEc45 | Transposase |
| JL017_RS23980 () | 75492..75965 | - | 474 | Protein_85 | IS3 family transposase IS629 | Transposase |
| JL017_RS23985 () | 76055..77563 | - | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| JL017_RS23990 () | 78236..78975 | - | 740 | Protein_87 | IS3 family transposase IS629 | Transposase |
| JL017_RS23995 () | 79080..79375 | - | 296 | Protein_88 | IS3 family transposase ISCARN101 | Transposase |
| JL017_RS24000 () | 79525..80016 | - | 492 | Protein_89 | IS91 family transposase ISSbo1 | Transposase |
| JL017_RS24005 () | 79997..80269 | - | 273 | WP_000019162.1 | hypothetical protein | - |
| JL017_RS24010 () | 80585..81361 | + | 777 | WP_001378495.1 | Heat-labile enterotoxin A chain | VF |
| JL017_RS24015 () | 81358..81732 | + | 375 | WP_013188479.1 | Heat-labile enterotoxin B chain | VF |
| JL017_RS24020 () | 82053..82949 | - | 897 | Protein_93 | IS3 family transposase ISSd1 | Transposase |
| JL017_RS24025 () | 82956..84107 | - | 1152 | WP_001254933.1 | IS30 family transposase IS30D | Transposase |
| JL017_RS24030 () | 84172..84528 | + | 357 | Protein_95 | IS3 family transposase IS911 | Transposase |
| JL017_RS24035 () | 84603..86570 | + | 1968 | Protein_96 | ParB/RepB/Spo0J family partition protein | - |
| JL017_RS24040 () | 86625..87059 | + | 435 | WP_000845954.1 | conjugation system SOS inhibitor PsiB | - |
| JL017_RS24045 () | 87056..87775 | + | 720 | WP_001751265.1 | plasmid SOS inhibition protein A | - |
| - () | 87787..87981 | + | 195 | NuclAT_0 | - | - |
| - () | 87787..87981 | + | 195 | NuclAT_0 | - | - |
| - () | 87787..87981 | + | 195 | NuclAT_0 | - | - |
| - () | 87787..87981 | + | 195 | NuclAT_0 | - | - |
| JL017_RS24050 () | 88046..88204 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | - |
| JL017_RS24055 () | 88442..88802 | - | 361 | Protein_100 | hypothetical protein | - |
| JL017_RS24060 () | 89119..89421 | + | 303 | WP_001272235.1 | hypothetical protein | - |
| JL017_RS24065 () | 89577..89864 | + | 288 | WP_000107526.1 | hypothetical protein | - |
| JL017_RS24070 () | 89983..90804 | + | 822 | WP_001234494.1 | DUF945 domain-containing protein | - |
| JL017_RS24075 () | 91100..91609 | - | 510 | Protein_104 | hypothetical protein | VF |
| JL017_RS24080 () | 92025..92408 | + | 384 | WP_001751261.1 | relaxosome protein TraM | - |
| JL017_RS24085 () | 92602..93273 | + | 672 | WP_000283565.1 | conjugal transfer transcriptional regulator TraJ | - |
| JL017_RS24090 () | 93410..93637 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| JL017_RS24095 () | 93670..94032 | + | 363 | WP_001098998.1 | type IV conjugative transfer system pilin TraA | - |
| JL017_RS24100 () | 94037..94348 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| JL017_RS24105 () | 94370..94936 | + | 567 | WP_001751258.1 | type IV conjugative transfer system protein TraE | - |
| JL017_RS24110 () | 94923..95651 | + | 729 | WP_001230778.1 | type-F conjugative transfer system secretin TraK | - |
| JL017_RS24115 () | 95804..96133 | + | 330 | Protein_112 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JL017_RS24120 () | 96063..96437 | + | 375 | WP_071594518.1 | P-type conjugative transfer protein TrbJ | - |
| JL017_RS24125 () | 96391..96783 | + | 393 | WP_000138370.1 | F-type conjugal transfer protein TrbF | - |
| JL017_RS24130 () | 96770..98143 | + | 1374 | WP_001393322.1 | conjugal transfer protein TraH | - |
| JL017_RS24135 () | 98140..99216 | + | 1077 | Protein_116 | conjugal transfer protein TraG | - |
| JL017_RS24140 () | 99302..99727 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| JL017_RS24145 () | 99724..100074 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| JL017_RS24150 () | 100105..100269 | + | 165 | Protein_119 | IS66 family transposase | - |
| JL017_RS24155 () | 100335..101114 | - | 780 | WP_001297096.1 | IS21 family transposase IS100kyp | Transposase |
| JL017_RS24160 () | 101114..102136 | - | 1023 | WP_001295213.1 | IS21 family transposase IS100kyp | Transposase |
| JL017_RS24165 () | 102223..103677 | + | 1455 | Protein_122 | IS66 family transposase ISEc23 | Transposase |
| JL017_RS24170 () | 103704..105455 | + | 1752 | Protein_123 | conjugal transfer mating pair stabilization protein TraG | - |
| JL017_RS24175 () | 105488..106009 | + | 522 | WP_047648615.1 | conjugal transfer entry exclusion protein TraS | - |
| JL017_RS24180 () | 106034..106765 | + | 732 | WP_001366079.1 | complement resistance protein TraT | - |
| JL017_RS24185 () | 106968..107705 | + | 738 | WP_000199908.1 | hypothetical protein | - |
| JL017_RS24190 () | 107756..109979 | + | 2224 | Protein_127 | type IV conjugative transfer system coupling protein TraD | - |
| JL017_RS24195 () | 109979..112006 | + | 2028 | Protein_128 | Multifunctional conjugation protein TraI | Relaxase |
| JL017_RS24200 () | 111999..112304 | + | 306 | Protein_129 | type-F conjugative transfer system pilin acetylase TraX | - |
| JL017_RS24205 () | 112363..113223 | + | 861 | WP_000704511.1 | Quorum-quenching protein AidA | VF |
| JL017_RS24210 () | 113326..113886 | + | 561 | WP_000840475.1 | fertility inhibition protein FinO | - |
| JL017_RS24215 () | 114017..114226 | + | 210 | WP_001297500.1 | hypothetical protein | - |
| JL017_RS24220 () | 114638..115264 | + | 627 | WP_001393151.1 | hypothetical protein | - |
| JL017_RS24225 () | 115416..116006 | + | 591 | WP_001393319.1 | DUF2726 domain-containing protein | - |
| JL017_RS24230 () | 116246..116500 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|