MGE detailed information
MGE type: Prophage MGE length: 68612 bp
Accession: NZ_LR883006 Location: 2331638..2400249 Organism: Escherichia coli isolate L5_E1779_ETEC Replicon: chromosome
Accession: NZ_LR883006 Location: 2331638..2400249 Organism: Escherichia coli isolate L5_E1779_ETEC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JL014_RS11340 () | 2327536..2328756 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| JL014_RS11345 () | 2328881..2329576 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| JL014_RS11350 () | 2329529..2330821 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| JL014_RS11355 () | 2330981..2331595 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| JL014_RS11360 () | 2331638..2332492 | - | 855 | WP_000526492.1 | dimethyl sulfoxide reductase anchor subunit | - |
| JL014_RS11365 () | 2332494..2333111 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| JL014_RS11370 () | 2333122..2335545 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| JL014_RS11375 () | 2335606..2338032 | - | 2427 | WP_000041685.1 | dimethyl sulfoxide reductase subunit A | - |
| JL014_RS11380 () | 2338231..2338536 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| JL014_RS11385 () | 2338644..2339354 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| JL014_RS11390 () | 2339357..2339917 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| JL014_RS11395 () | 2339952..2340293 | - | 342 | WP_000705214.1 | DUF1283 family protein | - |
| JL014_RS11400 () | 2340428..2340754 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| JL014_RS11405 () | 2340960..2342174 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| JL014_RS11410 () | 2342186..2343205 | + | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| JL014_RS11415 () | 2343263..2343370 | + | 108 | WP_072131185.1 | transporter | - |
| JL014_RS11420 () | 2343393..2344688 | - | 1296 | WP_001355842.1 | Putative defective protein IntQ ; Integrase | Integrase |
| JL014_RS11425 () | 2344708..2344959 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| JL014_RS11430 () | 2345029..2347509 | - | 2481 | WP_000048591.1 | exonuclease | - |
| JL014_RS11435 () | 2347589..2347792 | - | 204 | WP_001090551.1 | DUF1482 family protein | - |
| JL014_RS11440 () | 2347789..2347977 | - | 189 | WP_000449194.1 | cell division inhibition protein DicB | - |
| JL014_RS11445 () | 2348377..2348541 | + | 165 | WP_001331716.1 | hypothetical protein | - |
| JL014_RS11450 () | 2348545..2348763 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| JL014_RS11455 () | 2348923..2349078 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| JL014_RS11460 () | 2349351..2350067 | - | 717 | WP_000103684.1 | helix-turn-helix domain-containing protein | - |
| JL014_RS11465 () | 2350117..2350332 | + | 216 | WP_000471549.1 | transcriptional regulator | - |
| JL014_RS11470 () | 2350329..2350754 | + | 426 | WP_000693850.1 | Rha family transcriptional regulator | - |
| JL014_RS11475 () | 2350826..2351896 | + | 1071 | WP_001262391.1 | DNA-binding protein | - |
| JL014_RS11480 () | 2351937..2352359 | + | 423 | WP_001151151.1 | DUF977 family protein | - |
| JL014_RS11490 () | 2353865..2354644 | - | 780 | WP_001297096.1 | IS21 family transposase IS100kyp | Transposase |
| JL014_RS11495 () | 2354644..2355666 | - | 1023 | WP_001356151.1 | IS21 family transposase IS100kyp | Transposase |
| JL014_RS11500 () | 2355920..2357917 | + | 1998 | WP_005032116.1 | choline BCCT transporter BetT | - |
| JL014_RS11505 () | 2357981..2359258 | + | 1278 | WP_000625667.1 | DUF2254 domain-containing protein | - |
| JL014_RS11510 () | 2359541..2360236 | - | 696 | WP_032190252.1 | hypothetical protein | - |
| JL014_RS11515 () | 2360239..2360745 | - | 507 | WP_000130123.1 | hypothetical protein | - |
| JL014_RS11520 () | 2360742..2361572 | - | 831 | WP_001399639.1 | Sporulation initiation inhibitor protein Soj | VF |
| - () | 2362516..2362574 | - | 59 | - | - | Antitoxin Detail |
| JL014_RS11525 () | 2362586..2362741 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| JL014_RS11530 () | 2362908..2363186 | + | 279 | WP_001410105.1 | hypothetical protein | - |
| JL014_RS11535 () | 2363188..2364234 | + | 1047 | WP_001265103.1 | DUF968 domain-containing protein | - |
| JL014_RS11540 () | 2364247..2364618 | + | 372 | WP_001217451.1 | RusA family crossover junction endodeoxyribonuclease | - |
| JL014_RS11545 () | 2364608..2364961 | + | 354 | WP_000532207.1 | antitermination protein Q | - |
| JL014_RS11550 () | 2365168..2366451 | - | 1284 | WP_000123148.1 | hypothetical protein | - |
| JL014_RS11555 () | 2366708..2366902 | + | 195 | WP_001355891.1 | hypothetical protein | - |
| JL014_RS11560 () | 2367052..2368098 | + | 1047 | WP_000799652.1 | site-specific DNA-methyltransferase | - |
| JL014_RS11575 () | 2369168..2369560 | + | 393 | WP_001398932.1 | phage holin | - |
| JL014_RS11580 () | 2369550..2369828 | + | 279 | WP_001398933.1 | phage holin family protein | - |
| JL014_RS11585 () | 2369830..2370375 | + | 546 | WP_000836754.1 | glycoside hydrolase family 108 protein | - |
| JL014_RS11590 () | 2370595..2370708 | + | 114 | WP_001305859.1 | hypothetical protein | - |
| JL014_RS11595 () | 2370737..2370892 | + | 156 | WP_001138277.1 | hypothetical protein | - |
| JL014_RS11600 () | 2371064..2371357 | - | 294 | WP_000738421.1 | increased serum survival lipoprotein Iss | - |
| JL014_RS11605 () | 2371718..2371912 | - | 195 | WP_001415975.1 | YlcI/YnfO family protein | - |
| JL014_RS11610 () | 2372301..2372846 | + | 546 | WP_000453576.1 | DNA-packaging protein | - |
| JL014_RS11615 () | 2372821..2374236 | + | 1416 | WP_095908821.1 | phage terminase large subunit family protein | - |
| JL014_RS11620 () | 2374157..2375728 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| JL014_RS11625 () | 2375748..2376095 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| JL014_RS11630 () | 2376095..2376772 | - | 678 | WP_001711999.1 | IS66 family transposase ISCro1 | Transposase |
| JL014_RS11635 () | 2376839..2377453 | + | 615 | WP_071597534.1 | phage terminase large subunit family protein | - |
| JL014_RS11640 () | 2377450..2377656 | + | 207 | WP_000198149.1 | gpW family protein | - |
| JL014_RS11645 () | 2377653..2379254 | + | 1602 | WP_001355924.1 | phage portal protein | - |
| JL014_RS11650 () | 2379235..2380554 | + | 1320 | WP_000123336.1 | S49 family peptidase | - |
| JL014_RS11655 () | 2380564..2380896 | + | 333 | WP_001299443.1 | head decoration protein | - |
| JL014_RS11660 () | 2380952..2381977 | + | 1026 | WP_000063254.1 | major capsid protein | - |
| JL014_RS11665 () | 2382019..2382405 | + | 387 | WP_000158859.1 | DNA-packaging protein FI | - |
| JL014_RS11670 () | 2382417..2382770 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
| JL014_RS11675 () | 2382782..2383360 | + | 579 | WP_000985130.1 | phage tail protein | - |
| JL014_RS11680 () | 2383357..2383752 | + | 396 | WP_000683119.1 | phage minor tail U family protein | - |
| JL014_RS11685 () | 2383760..2384500 | + | 741 | WP_024238092.1 | phage tail protein | - |
| JL014_RS11690 () | 2384516..2384938 | + | 423 | WP_000479153.1 | phage minor tail protein G | - |
| JL014_RS11695 () | 2384920..2385354 | + | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| JL014_RS11700 () | 2385347..2387107 | + | 1761 | Protein_2287 | phage tail tape measure protein | - |
| JL014_RS11705 () | 2387198..2387925 | + | 728 | Protein_2288 | phage tail tape measure protein | - |
| JL014_RS11710 () | 2387922..2388251 | + | 330 | WP_000847379.1 | phage tail protein | - |
| JL014_RS11715 () | 2388251..2388949 | + | 699 | Protein_2290 | phage minor tail protein L | - |
| JL014_RS11720 () | 2388955..2389700 | + | 746 | Protein_2291 | phage tail protein | - |
| JL014_RS11725 () | 2389637..2390239 | + | 603 | WP_000090844.1 | tail assembly protein | - |
| JL014_RS11730 () | 2390300..2393695 | + | 3396 | WP_095908820.1 | host specificity protein J | - |
| JL014_RS11735 () | 2393763..2394362 | + | 600 | WP_001233545.1 | Outer membrane protein X | VF |
| JL014_RS11740 () | 2394427..2396181 | + | 1755 | Protein_2295 | prophage tail fiber N-terminal domain-containing protein | - |
| JL014_RS11745 () | 2396392..2396958 | + | 567 | WP_001165996.1 | DUF4376 domain-containing protein | - |
| JL014_RS11750 () | 2397041..2397118 | - | 78 | Protein_2297 | DinI family protein | - |
| JL014_RS11755 () | 2397178..2398461 | + | 1284 | Protein_2298 | MHS family MFS transporter YdfJ | - |
| JL014_RS11760 () | 2398550..2400010 | + | 1461 | WP_000527797.1 | mannitol dehydrogenase family protein | - |
| JL014_RS11765 () | 2400046..2400249 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| JL014_RS11770 () | 2400427..2401113 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| JL014_RS11775 () | 2401202..2401948 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| JL014_RS11780 () | 2402085..2404130 | + | 2046 | WP_001315525.1 | peptidyl-dipeptidase Dcp | - |
| JL014_RS11785 () | 2404175..2404693 | - | 519 | WP_001024809.1 | 2-oxo-tetronate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|