MGE detailed information
MGE type: Conjugative plasmid MGE length: 72255 bp
Accession: NZ_LR882980 Location: 1..72255 Organism: Escherichia coli isolate L3_CS7_E2980 Replicon: plasmid 3
Accession: NZ_LR882980 Location: 1..72255 Organism: Escherichia coli isolate L3_CS7_E2980 Replicon: plasmid 3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLZ94_RS24825 () | 1..858 | + | 858 | WP_001388371.1 | incFII family plasmid replication initiator RepA | - |
| JLZ94_RS24830 () | 1774..2043 | + | 270 | WP_000079939.1 | hypothetical protein | Antitoxin Detail |
| JLZ94_RS24835 () | 2040..2204 | + | 165 | WP_001388374.1 | hypothetical protein | Toxin Detail |
| JLZ94_RS24840 () | 2252..3175 | + | 924 | WP_001415483.1 | hypothetical protein | - |
| JLZ94_RS24845 () | 3617..3997 | + | 381 | WP_001696636.1 | HTH domain-containing protein | - |
| JLZ94_RS24850 () | 4109..4513 | + | 405 | Protein_6 | IS91 family transposase ISPps1 | Transposase |
| JLZ94_RS24855 () | 4620..5456 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| JLZ94_RS24860 () | 5456..6259 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| JLZ94_RS24865 () | 6320..7135 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| JLZ94_RS24870 () | 7472..7675 | + | 204 | WP_000131876.1 | hypothetical protein | - |
| JLZ94_RS24875 () | 7666..7887 | + | 222 | WP_001251694.1 | hypothetical protein | - |
| JLZ94_RS24880 () | 8122..8451 | - | 330 | WP_001415369.1 | hypothetical protein | - |
| JLZ94_RS24885 () | 8638..9498 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| JLZ94_RS24890 () | 9789..10493 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JLZ94_RS24895 () | 11157..12137 | + | 981 | WP_001218107.1 | plasmid segregation protein ParM | - |
| JLZ94_RS24900 () | 12140..12562 | + | 423 | WP_000774834.1 | plasmid partitioning/stability family protein | - |
| JLZ94_RS24905 () | 12986..13888 | + | 903 | WP_001386431.1 | DUF1281 domain-containing protein | - |
| JLZ94_RS24910 () | 13885..14196 | + | 312 | WP_032146222.1 | hypothetical protein | - |
| JLZ94_RS24915 () | 14273..14956 | + | 684 | WP_000086115.1 | DNA methylase | - |
| JLZ94_RS24920 () | 14957..15178 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| JLZ94_RS24925 () | 15192..15626 | + | 435 | WP_000274496.1 | DUF1380 family protein | - |
| JLZ94_RS24930 () | 15671..16441 | + | 771 | WP_001006239.1 | hypothetical protein | - |
| JLZ94_RS24935 () | 16977..17279 | + | 303 | WP_072115680.1 | antirestriction protein | - |
| JLZ94_RS24940 () | 17326..17748 | + | 423 | WP_001763816.1 | DUF1380 family protein | - |
| JLZ94_RS24945 () | 17745..17936 | + | 192 | WP_001027511.1 | hypothetical protein | - |
| JLZ94_RS24950 () | 18215..18463 | - | 249 | WP_071587243.1 | hypothetical protein | - |
| JLZ94_RS24955 () | 18978..19208 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| JLZ94_RS24960 () | 19260..20621 | + | 1362 | WP_001386125.1 | DUF3560 domain-containing protein | - |
| JLZ94_RS24965 () | 20668..21231 | + | 564 | WP_001462138.1 | class I SAM-dependent methyltransferase | - |
| JLZ94_RS24970 () | 22092..22619 | + | 528 | WP_000290816.1 | single-stranded DNA-binding protein | - |
| JLZ94_RS24975 () | 22675..22908 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| JLZ94_RS24980 () | 22972..24930 | + | 1959 | WP_001696680.1 | ParB/RepB/Spo0J family partition protein | - |
| JLZ94_RS24985 () | 24985..25419 | + | 435 | WP_000845950.1 | conjugation system SOS inhibitor PsiB | - |
| JLZ94_RS24990 () | 25416..26135 | + | 720 | WP_000994093.1 | plasmid SOS inhibition protein A | - |
| JLZ94_RS24995 () | 26132..26446 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - () | 26403..26603 | + | 201 | NuclAT_0 | - | - |
| - () | 26403..26603 | + | 201 | NuclAT_0 | - | - |
| - () | 26403..26603 | + | 201 | NuclAT_0 | - | - |
| - () | 26403..26603 | + | 201 | NuclAT_0 | - | - |
| JLZ94_RS25000 () | 26655..26816 | + | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | - |
| JLZ94_RS25005 () | 26909..27100 | + | 192 | WP_200999714.1 | hypothetical protein | - |
| JLZ94_RS25010 () | 27104..28675 | - | 1572 | WP_024190699.1 | IS66 family transposase IS679 | Transposase |
| JLZ94_RS25015 () | 28695..29042 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| JLZ94_RS25020 () | 29042..29692 | - | 651 | WP_000993921.1 | IS66 family transposase IS679 | Transposase |
| JLZ94_RS25025 () | 30686..30982 | + | 297 | WP_001272248.1 | hypothetical protein | - |
| JLZ94_RS25030 () | 31093..31914 | + | 822 | WP_001234441.1 | DUF945 domain-containing protein | - |
| JLZ94_RS25035 () | 32211..32813 | - | 603 | WP_077635587.1 | hypothetical protein | VF |
| JLZ94_RS25040 () | 33135..33518 | + | 384 | WP_001151538.1 | relaxosome protein TraM | - |
| JLZ94_RS25045 () | 33705..34394 | + | 690 | WP_000283391.1 | conjugal transfer transcriptional regulator TraJ | - |
| JLZ94_RS25050 () | 34493..34888 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| JLZ94_RS25055 () | 34920..35285 | + | 366 | WP_001099002.1 | type IV conjugative transfer system pilin TraA | - |
| JLZ94_RS25060 () | 35300..35611 | + | 312 | WP_000012116.1 | type IV conjugative transfer system protein TraL | - |
| JLZ94_RS25065 () | 35633..36199 | + | 567 | WP_000399801.1 | type IV conjugative transfer system protein TraE | - |
| JLZ94_RS25070 () | 36186..36914 | + | 729 | WP_001230778.1 | type-F conjugative transfer system secretin TraK | - |
| JLZ94_RS25075 () | 36914..38365 | + | 1452 | WP_042015808.1 | conjugal transfer protein TraB | - |
| JLZ94_RS25080 () | 38355..38921 | + | 567 | WP_000896600.1 | conjugal transfer protein TraP | - |
| JLZ94_RS25085 () | 38875..39228 | + | 354 | WP_071594551.1 | conjugal transfer protein TrbD | - |
| JLZ94_RS25090 () | 39221..39472 | + | 252 | WP_001038347.1 | conjugal transfer protein TrbG | - |
| JLZ94_RS25095 () | 39469..39984 | + | 516 | WP_000809905.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JLZ94_RS25100 () | 40119..40340 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| JLZ94_RS25105 () | 40333..40569 | + | 237 | WP_001763755.1 | hypothetical protein | - |
| JLZ94_RS25110 () | 40751..43381 | + | 2631 | WP_000069762.1 | type IV secretion system protein TraC | - |
| JLZ94_RS25115 () | 43378..43764 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| JLZ94_RS25120 () | 43761..44393 | + | 633 | WP_001763757.1 | type-F conjugative transfer system protein TraW | - |
| JLZ94_RS25125 () | 44390..45382 | + | 993 | WP_000830836.1 | conjugal transfer pilus assembly protein TraU | - |
| JLZ94_RS25130 () | 45408..45716 | + | 309 | WP_000412445.1 | hypothetical protein | - |
| JLZ94_RS25135 () | 45886..46203 | + | 318 | Protein_63 | TraU family protein | - |
| JLZ94_RS25140 () | 46229..46690 | + | 462 | WP_001763758.1 | hypothetical protein | - |
| JLZ94_RS25145 () | 46720..47172 | + | 453 | WP_001732196.1 | hypothetical protein | - |
| JLZ94_RS25150 () | 47200..47838 | + | 639 | WP_001763759.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JLZ94_RS25155 () | 47835..48206 | + | 372 | WP_000056340.1 | hypothetical protein | - |
| JLZ94_RS25160 () | 48231..48653 | + | 423 | WP_001229309.1 | HNH endonuclease | - |
| JLZ94_RS25165 () | 48650..50458 | + | 1809 | WP_001763760.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JLZ94_RS25170 () | 50485..50741 | + | 257 | Protein_70 | conjugal transfer protein TrbE | - |
| JLZ94_RS25175 () | 50734..51477 | + | 744 | WP_001749618.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JLZ94_RS25180 () | 51491..51832 | + | 342 | WP_001763761.1 | conjugal transfer protein TrbA | - |
| JLZ94_RS25185 () | 52228..52512 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JLZ94_RS25190 () | 52499..53044 | + | 546 | WP_001763763.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JLZ94_RS25195 () | 52974..53321 | + | 348 | WP_071594552.1 | P-type conjugative transfer protein TrbJ | - |
| JLZ94_RS25200 () | 53269..53694 | + | 426 | WP_071594553.1 | F-type conjugal transfer protein TrbF | - |
| JLZ94_RS25205 () | 53681..55054 | + | 1374 | WP_001473211.1 | conjugal transfer protein TraH | - |
| JLZ94_RS25210 () | 55051..57867 | + | 2817 | WP_001763766.1 | conjugal transfer mating pair stabilization protein TraG | - |
| JLZ94_RS25215 () | 57900..58421 | + | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| JLZ94_RS25220 () | 58446..59177 | + | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| JLZ94_RS25225 () | 59380..60117 | + | 738 | WP_001763768.1 | hypothetical protein | - |
| JLZ94_RS25230 () | 60168..62411 | + | 2244 | WP_054627178.1 | type IV conjugative transfer system coupling protein TraD | - |
| JLZ94_RS25235 () | 62411..67681 | + | 5271 | WP_001763770.1 | Multifunctional conjugation protein TraI | Relaxase |
| JLZ94_RS25240 () | 67730..68149 | + | 420 | WP_000451342.1 | hypothetical protein | - |
| JLZ94_RS25245 () | 68171..68905 | + | 735 | WP_000432273.1 | conjugal transfer pilus acetylase TraX | - |
| JLZ94_RS25250 () | 68960..69520 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| JLZ94_RS25255 () | 69652..69864 | + | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| JLZ94_RS25260 () | 70110..70571 | + | 462 | WP_001233850.1 | thermonuclease family protein | - |
| JLZ94_RS25265 () | 70617..70826 | + | 210 | WP_001301411.1 | hemolysin expression modulator Hha | - |
| JLZ94_RS25270 () | 70864..71454 | + | 591 | WP_000766823.1 | DUF2726 domain-containing protein | - |
| JLZ94_RS25275 () | 71694..71954 | + | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|