MGE detailed information
MGE type: IScluster/Tn MGE length: 11755 bp
Accession: NZ_LR882500 Location: 1161700..1173454 Organism: Mycobacterium tuberculosis variant microti strain 94-2272 isolate human Replicon: chromosome
Accession: NZ_LR882500 Location: 1161700..1173454 Organism: Mycobacterium tuberculosis variant microti strain 94-2272 isolate human Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JOA04_RS05440 () | 1158635..1159204 | + | 570 | WP_003405322.1 | K(+)-transporting ATPase subunit C | - |
| JOA04_RS05445 () | 1159208..1160737 | - | 1530 | WP_003405324.1 | HAMP domain-containing histidine kinase | - |
| JOA04_RS05450 () | 1160745..1161518 | - | 774 | WP_003405328.1 | two-component system response regulator TrcR | - |
| JOA04_RS05455 () | 1161700..1163140 | - | 1441 | Protein_1073 | ISNCY family transposase | - |
| JOA04_RS05460 () | 1163326..1163610 | - | 285 | WP_003405333.1 | ESAT-6-like protein EsxV | VF |
| JOA04_RS05465 () | 1163637..1163933 | - | 297 | WP_003405345.1 | type VII secretion system ESX-5 protein EsxJ | - |
| JOA04_RS05470 () | 1164079..1165254 | - | 1176 | WP_003405368.1 | PPE family protein PPE15 | VF |
| JOA04_RS05475 () | 1165331..1166158 | - | 828 | WP_003405370.1 | PE domain-containing protein | - |
| JOA04_RS05480 () | 1166946..1167185 | - | 240 | WP_003405375.1 | hypothetical protein | - |
| JOA04_RS05485 () | 1167354..1168281 | - | 928 | Protein_1079 | IS5-like element ISMt1 family transposase | - |
| JOA04_RS05490 () | 1168564..1169589 | - | 1026 | WP_003405514.1 | serine protease | - |
| JOA04_RS05495 () | 1169836..1170459 | + | 624 | WP_003405517.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| JOA04_RS05500 () | 1170456..1171337 | + | 882 | WP_003898703.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| JOA04_RS05505 () | 1172207..1173454 | + | 1248 | WP_202581990.1 | IS256 family transposase IS1081 | Transposase |
| JOA04_RS05510 () | 1173822..1174937 | - | 1116 | WP_003405582.1 | hypothetical protein | - |
| JOA04_RS05515 () | 1174894..1175097 | - | 204 | WP_003405585.1 | hypothetical protein | - |
| JOA04_RS05520 () | 1175170..1175616 | + | 447 | WP_003405595.1 | oxidation-sensing regulator MosR | - |
| JOA04_RS05525 () | 1175664..1176569 | + | 906 | WP_003405600.1 | SDR family oxidoreductase | - |
| JOA04_RS05530 () | 1176728..1176907 | - | 180 | WP_023637525.1 | helix-turn-helix domain-containing protein | - |
| JOA04_RS05535 () | 1176974..1177713 | - | 740 | Protein_1089 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA10016 | NC_000962 | 1158918..1170670 | 0.001 |