MGE detailed information
MGE type: Prophage MGE length: 51694 bp
Accession: NZ_LR882500 Location: 1025379..1077072 Organism: Mycobacterium tuberculosis variant microti strain 94-2272 isolate human Replicon: chromosome
Accession: NZ_LR882500 Location: 1025379..1077072 Organism: Mycobacterium tuberculosis variant microti strain 94-2272 isolate human Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JOA04_RS04805 () | 1021572..1022843 | - | 1272 | WP_003404747.1 | PPE family protein | - |
| JOA04_RS04810 () | 1022858..1023157 | - | 300 | WP_003404748.1 | PE family protein | - |
| JOA04_RS04815 () | 1023601..1025382 | + | 1782 | WP_003404749.1 | BCCT family transporter | - |
| JOA04_RS04820 () | 1025379..1025636 | + | 258 | WP_003404750.1 | hypothetical protein | - |
| JOA04_RS04825 () | 1025725..1026201 | + | 477 | WP_003404754.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JOA04_RS04830 () | 1026198..1026698 | + | 501 | WP_003404756.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JOA04_RS04840 () | 1027011..1028330 | - | 1320 | WP_003404757.1 | IS256-like element IS1554 family transposase | - |
| JOA04_RS04845 () | 1028618..1029199 | + | 582 | WP_105799544.1 | IS607-like element IS1535 family transposase | - |
| JOA04_RS04850 () | 1029199..1030857 | + | 1659 | WP_105799545.1 | IS607 family element transposase accessory protein TnpB | - |
| JOA04_RS04855 () | 1031033..1032097 | - | 1065 | WP_105799546.1 | poly-gamma-glutamate hydrolase family protein | - |
| JOA04_RS04860 () | 1032098..1033384 | - | 1287 | WP_003898649.1 | Nramp family divalent metal transporter | - |
| JOA04_RS04865 () | 1033416..1034153 | - | 738 | WP_003404764.1 | flavodoxin family protein | - |
| JOA04_RS04870 () | 1034230..1035306 | - | 1077 | WP_003404767.1 | hypothetical protein | - |
| JOA04_RS04875 () | 1035360..1036151 | - | 792 | WP_003404769.1 | SDR family oxidoreductase | - |
| JOA04_RS04880 () | 1036423..1037535 | + | 1113 | WP_003404775.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| JOA04_RS04885 () | 1037548..1038522 | + | 975 | WP_003404779.1 | phosphate ABC transporter permease subunit PstC | - |
| JOA04_RS04890 () | 1038519..1039433 | + | 915 | WP_003898651.1 | phosphate ABC transporter permease PstA | - |
| JOA04_RS04895 () | 1039440..1041434 | - | 1995 | WP_003404782.1 | serine/threonine protein kinase PknD | - |
| JOA04_RS04900 () | 1041456..1042568 | - | 1113 | WP_105799547.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| JOA04_RS04905 () | 1042784..1043614 | + | 831 | WP_003898653.1 | phosphate ABC transporter ATP-binding protein | - |
| JOA04_RS04910 () | 1043635..1044759 | + | 1125 | WP_003404786.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| JOA04_RS04915 () | 1044819..1045835 | + | 1017 | WP_003404792.1 | phosphate ABC transporter permease subunit PstC | - |
| JOA04_RS04920 () | 1045837..1046742 | + | 906 | WP_003404794.1 | phosphate ABC transporter permease PstA | - |
| JOA04_RS04925 () | 1046719..1047540 | - | 822 | WP_003404795.1 | Ku protein | - |
| JOA04_RS04930 () | 1047656..1049935 | + | 2280 | WP_070895661.1 | ATP-dependent DNA ligase | - |
| JOA04_RS04935 () | 1049932..1051866 | + | 1935 | WP_003404801.1 | fumarylacetoacetate hydrolase family protein | - |
| JOA04_RS04940 () | 1052113..1052979 | - | 867 | WP_003404819.1 | TIGR03619 family F420-dependent LLM class oxidoreductase | - |
| JOA04_RS04945 () | 1053064..1053837 | - | 774 | WP_105799548.1 | STAS domain-containing protein | - |
| JOA04_RS04950 () | 1053880..1054158 | + | 279 | WP_003901948.1 | hypothetical protein | - |
| JOA04_RS04955 () | 1054216..1055256 | - | 1041 | WP_003898656.1 | DUF4873 domain-containing protein | - |
| JOA04_RS04960 () | 1055285..1055761 | + | 477 | WP_003404828.1 | Fpg/Nei family DNA glycosylase | - |
| JOA04_RS04965 () | 1055779..1056528 | + | 750 | WP_003918158.1 | SDR family oxidoreductase | - |
| JOA04_RS04970 () | 1056544..1058205 | - | 1662 | WP_003404830.1 | glucose-6-phosphate isomerase | - |
| JOA04_RS04975 () | 1058967..1059161 | + | 195 | WP_003404835.1 | hypothetical protein | - |
| JOA04_RS04980 () | 1059166..1059483 | - | 318 | WP_003404838.1 | chorismate mutase | - |
| JOA04_RS04985 () | 1059780..1062095 | + | 2316 | WP_003404859.1 | DNA helicase PcrA | - |
| JOA04_RS04990 () | 1062176..1063174 | - | 999 | WP_003404862.1 | M23 family metallopeptidase | - |
| JOA04_RS04995 () | 1063484..1064647 | + | 1164 | WP_003404866.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| JOA04_RS05000 () | 1064669..1065571 | + | 903 | WP_003404870.1 | succinate--CoA ligase subunit alpha | - |
| JOA04_RS05005 () | 1065634..1066482 | - | 849 | WP_003404873.1 | LLM class F420-dependent oxidoreductase | - |
| JOA04_RS05010 () | 1066647..1067558 | + | 912 | WP_003404875.1 | DUF5336 domain-containing protein | - |
| JOA04_RS05015 () | 1067585..1068964 | + | 1380 | WP_202581987.1 | hypothetical protein | - |
| JOA04_RS05020 () | 1069080..1069727 | + | 648 | WP_003898661.1 | phosphoribosylglycinamide formyltransferase | - |
| JOA04_RS05025 () | 1069724..1071295 | + | 1572 | WP_003404890.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| JOA04_RS05030 () | 1071402..1072781 | + | 1380 | WP_003404892.1 | sigma 54-interacting transcriptional regulator | - |
| JOA04_RS05035 () | 1072774..1074792 | + | 2019 | WP_202586469.1 | VWA domain-containing protein | - |
| JOA04_RS05040 () | 1074846..1075067 | + | 222 | WP_003404898.1 | antitoxin VapB9 | - |
| JOA04_RS05045 () | 1075064..1075447 | + | 384 | WP_003404903.1 | PIN domain-containing protein | - |
| JOA04_RS05055 () | 1077071..1077298 | + | 228 | WP_202582113.1 | hypothetical protein | - |
| JOA04_RS05060 () | 1077317..1077991 | - | 675 | WP_003898662.1 | LppA family lipoprotein | - |
| JOA04_RS05065 () | 1077988..1079692 | - | 1705 | Protein_997 | alpha/beta hydrolase family protein | - |
| JOA04_RS05070 () | 1079655..1080074 | - | 420 | WP_003404920.1 | hypothetical protein | - |
| JOA04_RS05075 () | 1080110..1080712 | - | 603 | WP_202586470.1 | DUF1707 and DUF2154 domain-containing protein | - |
| JOA04_RS05080 () | 1080852..1081211 | + | 360 | WP_105799657.1 | copper-sensing transcriptional repressor CsoR | - |
| JOA04_RS05085 () | 1081268..1081564 | + | 297 | WP_003404939.1 | DUF1490 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|