MGE detailed information
MGE type: Mobilizable plasmid MGE length: 59944 bp
Accession: NZ_LR882495 Location: 1..59944 Organism: Escherichia coli isolate 2016-17-292 Replicon: plasmid 3
Accession: NZ_LR882495 Location: 1..59944 Organism: Escherichia coli isolate 2016-17-292 Replicon: plasmid 3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHO92_RS24090 () | 1..1029 | + | 1029 | WP_191519236.1 | replication initiation protein | - |
| IHO92_RS24095 () | 2433..2594 | + | 162 | WP_001366886.1 | type I toxin-antitoxin system Hok family toxin | - |
| IHO92_RS24100 () | 2744..3340 | + | 597 | WP_000125165.1 | hypothetical protein | - |
| IHO92_RS24105 () | 3358..3642 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| IHO92_RS24110 () | 3716..4381 | - | 666 | WP_000532148.1 | P-loop NTPase | - |
| IHO92_RS24115 () | 4979..5308 | + | 330 | WP_000855121.1 | hypothetical protein | - |
| IHO92_RS24120 () | 5889..6212 | + | 324 | WP_000427402.1 | hypothetical protein | - |
| IHO92_RS24125 () | 6253..6462 | + | 210 | WP_000866037.1 | hypothetical protein | - |
| IHO92_RS24130 () | 6560..6784 | + | 225 | WP_000814383.1 | hypothetical protein | - |
| IHO92_RS24135 () | 6836..7096 | + | 261 | WP_000702245.1 | hypothetical protein | Toxin Detail |
| IHO92_RS24140 () | 7086..7337 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| IHO92_RS24145 () | 7887..8165 | + | 279 | WP_000545937.1 | hypothetical protein | - |
| IHO92_RS24150 () | 8552..8734 | - | 183 | WP_001401700.1 | hypothetical protein | - |
| IHO92_RS24155 () | 9292..9474 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| IHO92_RS24160 () | 9499..9936 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| IHO92_RS24165 () | 10066..10386 | - | 321 | WP_001401701.1 | hypothetical protein | - |
| IHO92_RS24170 () | 10720..10898 | - | 179 | Protein_16 | hypothetical protein | - |
| IHO92_RS24175 () | 10900..11103 | - | 204 | WP_000224735.1 | hypothetical protein | - |
| IHO92_RS24180 () | 11109..11546 | - | 438 | WP_000206706.1 | hypothetical protein | - |
| IHO92_RS24185 () | 11566..12273 | - | 708 | WP_000108795.1 | hypothetical protein | - |
| IHO92_RS24190 () | 12275..13027 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| IHO92_RS24195 () | 13045..13446 | - | 402 | WP_000717859.1 | hypothetical protein | - |
| IHO92_RS24200 () | 13816..14157 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| IHO92_RS24205 () | 14154..18377 | + | 4224 | WP_000637164.1 | hypothetical protein | - |
| IHO92_RS24210 () | 18420..18860 | - | 441 | WP_000666087.1 | hypothetical protein | - |
| IHO92_RS24215 () | 19105..19359 | - | 255 | WP_024178142.1 | hypothetical protein | - |
| IHO92_RS24220 () | 19694..19900 | - | 207 | WP_000850855.1 | hemolysin expression modulator Hha | - |
| IHO92_RS24225 () | 20019..20339 | - | 321 | WP_000668719.1 | hypothetical protein | - |
| IHO92_RS24230 () | 20364..20570 | - | 207 | WP_021563360.1 | hypothetical protein | - |
| IHO92_RS24235 () | 20814..22970 | - | 2157 | WP_000765172.1 | type IA DNA topoisomerase | - |
| IHO92_RS24240 () | 22975..23550 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| IHO92_RS24245 () | 23720..25396 | - | 1677 | WP_000289344.1 | PcfJ domain-containing protein | - |
| IHO92_RS24250 () | 25669..26184 | - | 516 | WP_000698394.1 | thermonuclease family protein | - |
| IHO92_RS24255 () | 26231..26884 | - | 654 | WP_000572555.1 | hypothetical protein | - |
| IHO92_RS24260 () | 26896..28020 | - | 1125 | WP_000486715.1 | site-specific integrase | - |
| IHO92_RS24265 () | 28116..28313 | + | 198 | WP_001356717.1 | hypothetical protein | - |
| IHO92_RS24270 () | 29713..30756 | - | 1044 | Protein_36 | hypothetical protein | VF |
| IHO92_RS24275 () | 30769..31404 | - | 636 | WP_000934978.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| IHO92_RS24280 () | 31408..31890 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| IHO92_RS24285 () | 31956..32513 | - | 558 | WP_000095048.1 | hypothetical protein | - |
| IHO92_RS24290 () | 32558..33667 | - | 1110 | WP_000974901.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| IHO92_RS24295 () | 33658..35196 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| IHO92_RS24300 () | 35221..35715 | - | 495 | WP_000912552.1 | hypothetical protein | VF |
| IHO92_RS24305 () | 35699..37021 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| IHO92_RS24310 () | 37060..38703 | - | 1644 | WP_001035590.1 | Outer membrane lipoprotein BfpB | VF |
| IHO92_RS24315 () | 38696..39226 | - | 531 | WP_001220542.1 | sigma 54-interacting transcriptional regulator | - |
| IHO92_RS24320 () | 39273..41231 | - | 1959 | WP_000338974.1 | type IV secretory system conjugative DNA transfer family protein | - |
| IHO92_RS24325 () | 41247..42302 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| IHO92_RS24330 () | 42337..43476 | - | 1140 | WP_000790641.1 | Type IV secretion system protein virB10 | VF |
| IHO92_RS24335 () | 43466..44167 | - | 702 | WP_000274524.1 | Type IV secretion system protein PtlF | VF |
| IHO92_RS24340 () | 44233..44967 | - | 735 | WP_000432283.1 | Type IV secretion system protein virB8 | VF |
| IHO92_RS24345 () | 45133..47490 | - | 2358 | WP_000548954.1 | VirB4 family type IV secretion system protein | - |
| IHO92_RS24350 () | 47496..47816 | - | 321 | WP_000362081.1 | VirB3 family type IV secretion system protein | - |
| IHO92_RS24355 () | 47887..48177 | - | 291 | WP_000865478.1 | hypothetical protein | - |
| IHO92_RS24360 () | 48177..48761 | - | 585 | WP_001177114.1 | Type IV secretion system protein virB1 | VF |
| IHO92_RS24365 () | 48782..49180 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| IHO92_RS24370 () | 49520..49957 | - | 438 | WP_000539666.1 | type IV pilus biogenesis protein PilM | - |
| IHO92_RS24375 () | 49963..51198 | - | 1236 | WP_000733400.1 | hypothetical protein | VF |
| IHO92_RS24380 () | 51201..51488 | - | 288 | WP_001326593.1 | killer family protein | - |
| IHO92_RS24385 () | 51660..52295 | - | 636 | WP_000835773.1 | hypothetical protein | - |
| IHO92_RS24390 () | 52368..52655 | - | 288 | WP_001032611.1 | EexN family lipoprotein | - |
| IHO92_RS24395 () | 52668..52922 | - | 255 | WP_001043555.1 | EexN family lipoprotein | - |
| IHO92_RS24400 () | 52924..53565 | - | 642 | WP_001425343.1 | hypothetical protein | VF |
| IHO92_RS24405 () | 53571..54566 | - | 996 | WP_001028543.1 | type IV secretion system protein | - |
| IHO92_RS24410 () | 54570..54827 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| IHO92_RS24415 () | 54824..55126 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| IHO92_RS24420 () | 55142..55357 | - | 216 | WP_072053452.1 | hypothetical protein | - |
| IHO92_RS24425 () | 55541..56002 | - | 462 | WP_001243166.1 | hypothetical protein | - |
| IHO92_RS24430 () | 56013..56183 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| IHO92_RS24435 () | 56187..56630 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| IHO92_RS24440 () | 57004..57957 | - | 954 | WP_072089442.1 | SPFH/Band 7/PHB domain protein | - |
| IHO92_RS24445 () | 57984..58160 | - | 177 | WP_000753049.1 | hypothetical protein | - |
| IHO92_RS24450 () | 58153..58368 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| IHO92_RS24455 () | 58361..58867 | - | 507 | WP_001326595.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|