MGE detailed information
MGE type: Conjugative plasmid MGE length: 82142 bp
Accession: NZ_LR882059 Location: 1..82142 Organism: Escherichia coli isolate 2014-01-7375 Replicon: plasmid 3
Accession: NZ_LR882059 Location: 1..82142 Organism: Escherichia coli isolate 2014-01-7375 Replicon: plasmid 3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHP09_RS24600 () | 1..1023 | + | 1023 | WP_000140240.1 | replication initiation protein | - |
| IHP09_RS24605 () | 2785..3624 | - | 840 | WP_000581111.1 | hypothetical protein | - |
| IHP09_RS24610 () | 3631..4026 | - | 396 | WP_001280081.1 | hypothetical protein | - |
| IHP09_RS24615 () | 4460..5398 | + | 939 | Protein_4 | IS66 family transposase | - |
| IHP09_RS24620 () | 6083..6577 | + | 495 | WP_121865842.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| IHP09_RS24625 () | 6589..6768 | - | 180 | Protein_6 | IS3 family transposase ISEc31 | Transposase |
| IHP09_RS24630 () | 6849..8221 | - | 1373 | Protein_7 | group II intron reverse transcriptase/maturase | - |
| IHP09_RS24635 () | 8896..9276 | - | 381 | Protein_8 | IS3 family transposase | - |
| IHP09_RS24640 () | 10009..10746 | + | 738 | WP_000750408.1 | Chaperone protein caf1M | VF |
| IHP09_RS24645 () | 10761..13211 | + | 2451 | WP_001470028.1 | F1 capsule-anchoring protein | VF |
| IHP09_RS24650 () | 13279..13785 | + | 507 | WP_104730513.1 | hypothetical protein | - |
| IHP09_RS24655 () | 13985..14436 | + | 452 | Protein_12 | IS3 family transposase IS3411 | Transposase |
| IHP09_RS24660 () | 14415..14677 | - | 263 | Protein_13 | IS3 family transposase | - |
| IHP09_RS24665 () | 14703..15008 | - | 306 | Protein_14 | DDE-type integrase/transposase/recombinase | - |
| IHP09_RS24670 () | 15099..15890 | - | 792 | Protein_15 | IS66 family transposase IS682 | Transposase |
| IHP09_RS24675 () | 15946..17172 | + | 1227 | Protein_16 | IS3 family transposase | - |
| IHP09_RS24685 () | 19426..19719 | + | 294 | WP_000061333.1 | Major pilu subunit operon regulatory protein PapB | VF |
| IHP09_RS24690 () | 19897..20448 | + | 552 | WP_000789840.1 | hypothetical protein | - |
| IHP09_RS24695 () | 21971..22216 | - | 246 | WP_149517054.1 | hypothetical protein | - |
| IHP09_RS24700 () | 22270..23217 | - | 948 | Protein_21 | IS3 family transposase | - |
| IHP09_RS24705 () | 23819..27700 | - | 3882 | WP_001034077.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| IHP09_RS24710 () | 28689..28838 | + | 150 | WP_064717472.1 | hypothetical protein | - |
| IHP09_RS24715 () | 28959..29699 | + | 741 | WP_001066927.1 | IS91 family transposase ISMno23 | Transposase |
| IHP09_RS24720 () | 29984..30961 | - | 978 | WP_001470054.1 | RepB family plasmid replication initiator protein | - |
| IHP09_RS24725 () | 31605..32016 | - | 412 | Protein_26 | IS3 family transposase ISKpn37 | Transposase |
| IHP09_RS24730 () | 32018..32305 | - | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IHP09_RS24735 () | 32302..32553 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| IHP09_RS24740 () | 32728..32940 | - | 213 | WP_000402944.1 | hypothetical protein | - |
| IHP09_RS24745 () | 33314..34519 | + | 1206 | WP_000817642.1 | Plasmid partition protein A | VF |
| IHP09_RS24750 () | 34516..35478 | + | 963 | WP_000756325.1 | ParB/RepB/Spo0J family partition protein | - |
| IHP09_RS24755 () | 35619..35792 | - | 174 | Protein_32 | DUF4113 domain-containing protein | - |
| IHP09_RS24760 () | 36222..36377 | + | 156 | Protein_33 | antirestriction protein | - |
| IHP09_RS24765 () | 36423..36887 | + | 465 | WP_050554502.1 | DUF1380 family protein | - |
| IHP09_RS24770 () | 36884..37075 | + | 192 | WP_001027496.1 | hypothetical protein | - |
| IHP09_RS24775 () | 37054..37373 | - | 320 | Protein_36 | pilus assembly protein | - |
| IHP09_RS24780 () | 38047..38277 | + | 231 | WP_032200972.1 | hypothetical protein | - |
| IHP09_RS24785 () | 38329..39690 | + | 1362 | WP_191536376.1 | DUF3560 domain-containing protein | - |
| IHP09_RS24790 () | 39738..40301 | + | 564 | WP_104730534.1 | class I SAM-dependent methyltransferase | - |
| IHP09_RS24795 () | 40390..40812 | - | 423 | Protein_40 | hypothetical protein | - |
| IHP09_RS24800 () | 40882..41088 | + | 207 | WP_053287522.1 | hypothetical protein | - |
| IHP09_RS24805 () | 41113..41400 | + | 288 | WP_000107540.1 | hypothetical protein | - |
| IHP09_RS24810 () | 41519..42339 | + | 821 | Protein_43 | DUF945 domain-containing protein | - |
| IHP09_RS24815 () | 42635..43282 | - | 648 | WP_000601037.1 | hypothetical protein | VF |
| IHP09_RS24820 () | 43558..43941 | + | 384 | WP_001151520.1 | relaxosome protein TraM | - |
| IHP09_RS24825 () | 44133..44780 | + | 648 | WP_000337547.1 | transcriptional regulator TraJ family protein | - |
| IHP09_RS24830 () | 44888..45127 | + | 240 | WP_042357785.1 | conjugal transfer relaxosome protein TraY | - |
| IHP09_RS24835 () | 45161..45526 | + | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| IHP09_RS24840 () | 45541..45852 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| IHP09_RS24845 () | 45874..46440 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| IHP09_RS24850 () | 46451..47155 | + | 705 | WP_149517052.1 | type-F conjugative transfer system secretin TraK | - |
| IHP09_RS24855 () | 47155..48582 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| IHP09_RS24860 () | 48572..49159 | + | 588 | WP_000002771.1 | conjugal transfer protein TraP | - |
| IHP09_RS24865 () | 49098..49466 | + | 369 | WP_077815493.1 | conjugal transfer protein TrbD | - |
| IHP09_RS24870 () | 49463..49978 | + | 516 | WP_000724020.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IHP09_RS24875 () | 50113..50334 | + | 222 | WP_104730540.1 | conjugal transfer protein TraR | - |
| IHP09_RS24880 () | 50327..50800 | + | 474 | WP_000549569.1 | hypothetical protein | - |
| IHP09_RS24885 () | 51126..51488 | + | 363 | WP_000836687.1 | hypothetical protein | - |
| IHP09_RS24890 () | 51614..54244 | + | 2631 | WP_160524551.1 | type IV secretion system protein TraC | - |
| IHP09_RS24895 () | 54241..54627 | + | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| IHP09_RS24900 () | 54624..55256 | + | 633 | WP_001203734.1 | type-F conjugative transfer system protein TraW | - |
| IHP09_RS24905 () | 55253..56245 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| IHP09_RS24910 () | 56254..56892 | + | 639 | WP_104730559.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IHP09_RS24915 () | 56889..57269 | + | 381 | WP_053287535.1 | hypothetical protein | - |
| IHP09_RS24920 () | 57580..59409 | + | 1830 | WP_160524557.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IHP09_RS24925 () | 59436..59693 | + | 258 | WP_000864317.1 | conjugal transfer protein TrbE | - |
| IHP09_RS24930 () | 59686..60429 | + | 744 | WP_001030406.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IHP09_RS24935 () | 60443..60808 | + | 366 | WP_000008455.1 | hypothetical protein | - |
| IHP09_RS24940 () | 61187..61468 | + | 282 | WP_001233876.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IHP09_RS24945 () | 61455..62000 | + | 546 | WP_104730551.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IHP09_RS24950 () | 61930..62229 | + | 300 | WP_141094723.1 | P-type conjugative transfer protein TrbJ | - |
| IHP09_RS24955 () | 62225..62650 | + | 426 | WP_104730553.1 | F-type conjugal transfer protein TrbF | - |
| IHP09_RS24960 () | 62637..64010 | + | 1374 | WP_160523954.1 | conjugal transfer protein TraH | - |
| IHP09_RS24965 () | 64007..66826 | + | 2820 | WP_104730855.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IHP09_RS24970 () | 66845..67342 | + | 498 | WP_104730548.1 | entry exclusion protein | - |
| IHP09_RS24975 () | 67374..68105 | + | 732 | WP_089638634.1 | complement resistance protein TraT | - |
| IHP09_RS24980 () | 68358..70598 | + | 2241 | WP_191536372.1 | type IV conjugative transfer system coupling protein TraD | - |
| IHP09_RS24985 () | 70598..75868 | + | 5271 | WP_191536374.1 | Multifunctional conjugation protein TraI | Relaxase |
| IHP09_RS24990 () | 75888..76634 | + | 747 | WP_053287544.1 | conjugal transfer pilus acetylase TraX | - |
| IHP09_RS24995 () | 76689..77249 | + | 561 | WP_053287545.1 | fertility inhibition protein FinO | - |
| IHP09_RS25000 () | 78130..79358 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| IHP09_RS25005 () | 79865..80330 | - | 466 | Protein_82 | IS200-IS605 family transposase IS609 | Transposase |
| IHP09_RS25010 () | 80338..81399 | + | 1062 | Protein_83 | transposase | - |
| IHP09_RS25015 () | 81582..81830 | + | 249 | WP_001135589.1 | replication regulatory protein RepA | - |
| IHP09_RS25020 () | 81945..82106 | + | 162 | WP_141094714.1 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|