MGE detailed information
MGE type: Prophage MGE length: 77411 bp
Accession: NZ_LR881940 Location: 1938322..2015732 Organism: Escherichia coli isolate 2015-01-2097 Replicon: chromosome
Accession: NZ_LR881940 Location: 1938322..2015732 Organism: Escherichia coli isolate 2015-01-2097 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHP11_RS09195 () | 1935346..1936317 | - | 972 | WP_000564726.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| IHP11_RS09200 () | 1936314..1937057 | - | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| IHP11_RS09205 () | 1937098..1937493 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| IHP11_RS09210 () | 1937546..1938325 | - | 780 | WP_050582975.1 | DUF72 domain-containing protein | - |
| IHP11_RS09215 () | 1938322..1939581 | - | 1260 | WP_029487533.1 | Putative defective protein IntQ ; Integrase | Integrase |
| IHP11_RS09220 () | 1939624..1939869 | - | 246 | WP_016244760.1 | excisionase family protein | - |
| IHP11_RS09225 () | 1939873..1940091 | - | 219 | WP_117032036.1 | TraR/DksA family transcriptional regulator | - |
| IHP11_RS09230 () | 1940088..1940300 | - | 213 | WP_016247403.1 | hypothetical protein | - |
| IHP11_RS09235 () | 1940307..1940528 | - | 222 | WP_191521772.1 | TraR/DksA family transcriptional regulator | - |
| IHP11_RS09240 () | 1940525..1940905 | - | 381 | WP_191521773.1 | hypothetical protein | - |
| IHP11_RS09245 () | 1940902..1941099 | - | 198 | WP_191521774.1 | hypothetical protein | - |
| IHP11_RS09250 () | 1941087..1941626 | - | 540 | WP_191521775.1 | HD family hydrolase | - |
| IHP11_RS09255 () | 1941762..1942592 | - | 831 | WP_191521776.1 | DUF2303 family protein | - |
| IHP11_RS09260 () | 1942646..1943017 | - | 372 | WP_191521777.1 | hypothetical protein | - |
| IHP11_RS09265 () | 1943645..1944271 | - | 627 | WP_159381679.1 | LexA family transcriptional regulator | - |
| IHP11_RS09270 () | 1944371..1944586 | + | 216 | WP_001515606.1 | hypothetical protein | - |
| IHP11_RS09275 () | 1944609..1945157 | + | 549 | WP_001515605.1 | hypothetical protein | - |
| IHP11_RS09280 () | 1945330..1945515 | + | 186 | WP_024191785.1 | DUF4222 domain-containing protein | - |
| IHP11_RS09285 () | 1945499..1946431 | + | 933 | WP_001515603.1 | conserved phage C-terminal domain-containing protein | - |
| IHP11_RS09290 () | 1946431..1947762 | + | 1332 | WP_191521811.1 | phage N-6-adenine-methyltransferase | - |
| IHP11_RS09295 () | 1947755..1949692 | + | 1938 | WP_191521778.1 | DNA cytosine methyltransferase | - |
| IHP11_RS09300 () | 1949707..1950399 | + | 693 | WP_001515600.1 | phage regulatory protein/antirepressor Ant | - |
| IHP11_RS09305 () | 1950396..1951457 | + | 1062 | WP_047744246.1 | DUF968 domain-containing protein | - |
| IHP11_RS09310 () | 1951479..1952171 | + | 693 | WP_191521779.1 | antitermination protein | - |
| IHP11_RS09315 () | 1952641..1953396 | + | 756 | WP_000016608.1 | hypothetical protein | - |
| IHP11_RS09320 () | 1953396..1953800 | + | 405 | WP_000116520.1 | hypothetical protein | - |
| IHP11_RS09325 () | 1954010..1955062 | + | 1053 | WP_191521780.1 | site-specific DNA-methyltransferase | - |
| IHP11_RS09330 () | 1955131..1955433 | + | 303 | WP_000783336.1 | hypothetical protein | - |
| IHP11_RS09335 () | 1955433..1955966 | + | 534 | WP_000535562.1 | lysozyme | - |
| IHP11_RS09340 () | 1955966..1956427 | + | 462 | WP_000088936.1 | lysis protein | - |
| IHP11_RS09345 () | 1956460..1956864 | + | 405 | WP_001165319.1 | DUF2513 domain-containing protein | - |
| IHP11_RS09350 () | 1956941..1957582 | + | 642 | WP_155367676.1 | hypothetical protein | - |
| IHP11_RS09355 () | 1957824..1958405 | + | 582 | WP_064141836.1 | hypothetical protein | - |
| IHP11_RS09360 () | 1958347..1960473 | + | 2127 | WP_191521781.1 | phage terminase large subunit family protein | - |
| IHP11_RS09365 () | 1960482..1960745 | + | 264 | WP_000483310.1 | phage head-tail adapter protein | - |
| IHP11_RS09370 () | 1960745..1962379 | + | 1635 | WP_143887650.1 | phage portal protein | - |
| IHP11_RS09375 () | 1962376..1963242 | + | 867 | WP_021543305.1 | S49 family peptidase | - |
| IHP11_RS09380 () | 1963244..1963834 | + | 591 | WP_143887649.1 | hypothetical protein | - |
| IHP11_RS09385 () | 1963834..1964241 | + | 408 | WP_143887648.1 | head decoration protein | - |
| IHP11_RS09390 () | 1964340..1965389 | + | 1050 | WP_021543308.1 | major capsid protein | - |
| IHP11_RS09395 () | 1965391..1965768 | + | 378 | WP_021543309.1 | hypothetical protein | - |
| IHP11_RS09400 () | 1965773..1966132 | + | 360 | WP_021543310.1 | hypothetical protein | - |
| IHP11_RS09405 () | 1966129..1966674 | + | 546 | WP_021543311.1 | hypothetical protein | - |
| IHP11_RS09410 () | 1966677..1966862 | + | 186 | WP_021543312.1 | DUF2635 domain-containing protein | - |
| IHP11_RS09415 () | 1966859..1968370 | + | 1512 | WP_191521782.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| IHP11_RS09420 () | 1968374..1968745 | + | 372 | WP_000896639.1 | phage tail tube protein | - |
| IHP11_RS09425 () | 1968747..1969025 | + | 279 | WP_000818812.1 | phage tail assembly protein | - |
| IHP11_RS09430 () | 1969167..1971020 | + | 1854 | WP_191521783.1 | hypothetical protein | - |
| IHP11_RS09435 () | 1971067..1972467 | + | 1401 | WP_191521784.1 | DNA circularization N-terminal domain-containing protein | - |
| IHP11_RS09440 () | 1972464..1973549 | + | 1086 | WP_000102291.1 | tail protein | - |
| IHP11_RS09445 () | 1973546..1974127 | + | 582 | WP_063079440.1 | phage baseplate assembly protein | - |
| IHP11_RS09450 () | 1974124..1974573 | + | 450 | WP_191521785.1 | phage GP46 family protein | - |
| IHP11_RS09455 () | 1974563..1975711 | + | 1149 | WP_001116109.1 | baseplate J/gp47 family protein | - |
| IHP11_RS09460 () | 1975708..1976382 | + | 675 | WP_191521786.1 | YmfQ family protein | - |
| IHP11_RS09465 () | 1976409..1977194 | + | 786 | WP_001310746.1 | hypothetical protein | - |
| IHP11_RS09470 () | 1977173..1978264 | - | 1092 | WP_000901074.1 | acyltransferase | - |
| IHP11_RS09475 () | 1978264..1978527 | - | 264 | WP_024186701.1 | hypothetical protein | - |
| IHP11_RS09480 () | 1978629..1979021 | + | 393 | Protein_1848 | GDSL family lipase | - |
| IHP11_RS09485 () | 1980956..1982338 | + | 1383 | WP_088224449.1 | hypothetical protein | - |
| IHP11_RS09490 () | 1982414..1982779 | - | 366 | WP_088224450.1 | hypothetical protein | - |
| IHP11_RS09495 () | 1982780..1983097 | - | 318 | WP_088224451.1 | hypothetical protein | - |
| IHP11_RS09500 () | 1983536..1983775 | + | 240 | WP_088224408.1 | hypothetical protein | - |
| IHP11_RS09505 () | 1983775..1984092 | + | 318 | WP_088224407.1 | hypothetical protein | - |
| IHP11_RS09510 () | 1984357..1984923 | - | 567 | WP_000891621.1 | hydrolase | - |
| IHP11_RS09515 () | 1985233..1987005 | + | 1773 | WP_001258678.1 | aspartate--tRNA ligase | - |
| IHP11_RS09520 () | 1987123..1987575 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| IHP11_RS09525 () | 1987604..1988344 | + | 741 | WP_000907234.1 | putative transcriptional regulatory protein YebC | VF |
| IHP11_RS09530 () | 1988379..1988900 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| IHP11_RS09535 () | 1988902..1989504 | - | 603 | WP_191521787.1 | YebB family permuted papain-like enzyme | - |
| IHP11_RS09540 () | 1989575..1989640 | + | 66 | WP_072094247.1 | stress response small protein YobI | - |
| IHP11_RS09545 () | 1989779..1990390 | + | 612 | WP_000580327.1 | Holliday junction branch migration protein RuvA | - |
| IHP11_RS09550 () | 1990399..1991409 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| IHP11_RS09555 () | 1991750..1992535 | - | 786 | WP_000571480.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| IHP11_RS09560 () | 1992532..1993287 | - | 756 | WP_000202990.1 | Zinc import ATP-binding protein ZnuC | VF |
| IHP11_RS09565 () | 1993366..1994298 | + | 933 | WP_001300644.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| IHP11_RS09570 () | 1994314..1995636 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| IHP11_RS09575 () | 1995756..1996727 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| IHP11_RS09580 () | 1996858..1998300 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| IHP11_RS09585 () | 1998428..1999297 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| IHP11_RS09590 () | 1999635..2001110 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| IHP11_RS09595 () | 2001345..2003156 | + | 1812 | WP_001069486.1 | phosphogluconate dehydratase | - |
| IHP11_RS09600 () | 2003193..2003834 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| IHP11_RS09605 () | 2003890..2005068 | - | 1179 | WP_000173509.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| IHP11_RS09610 () | 2005202..2005492 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| IHP11_RS09615 () | 2005559..2005915 | + | 357 | WP_001295500.1 | protein YebF | - |
| IHP11_RS09620 () | 2006243..2006902 | + | 660 | WP_000024746.1 | tellurite resistance TerB family protein | - |
| IHP11_RS09625 () | 2007111..2009171 | + | 2061 | WP_191521788.1 | oligopeptidase B | - |
| IHP11_RS09630 () | 2009168..2009830 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| IHP11_RS09635 () | 2009854..2010510 | - | 657 | WP_000011660.1 | carbon-nitrogen hydrolase family protein | - |
| IHP11_RS09640 () | 2010612..2010842 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| IHP11_RS09645 () | 2010981..2011355 | + | 375 | WP_000255065.1 | CopC domain-containing protein YobA | - |
| IHP11_RS09650 () | 2011359..2012231 | + | 873 | WP_000879298.1 | copper homeostasis membrane protein CopD | - |
| IHP11_RS09655 () | 2012244..2012585 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - () | 2012613..2012884 | - | 272 | - | - | Antitoxin Detail |
| - () | 2012743..2012846 | + | 104 | - | - | Toxin Detail |
| IHP11_RS09660 () | 2012981..2013616 | + | 636 | WP_191521789.1 | protein-serine/threonine phosphatase | - |
| IHP11_RS09665 () | 2013637..2013828 | - | 192 | WP_001338167.1 | YebW family protein | - |
| IHP11_RS09670 () | 2013933..2014169 | - | 237 | WP_001338166.1 | DUF1480 family protein | - |
| IHP11_RS09675 () | 2014287..2015726 | - | 1440 | WP_001338165.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| IHP11_RS09680 () | 2015806..2018439 | - | 2634 | WP_191521790.1 | lipid-binding membrane homeostasis protein YebT | - |
| IHP11_RS09685 () | 2018408..2019691 | - | 1284 | WP_001741872.1 | membrane integrity lipid transport subunit YebS | - |
| IHP11_RS09690 () | 2019821..2020318 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|