MGE detailed information
MGE type: IScluster/Tn MGE length: 22472 bp
Accession: NZ_LR878366 Location: 37855..60326 Organism: Shigella flexneri 3a isolate 83 Replicon: plasmid 83_VP
Accession: NZ_LR878366 Location: 37855..60326 Organism: Shigella flexneri 3a isolate 83 Replicon: plasmid 83_VP
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMV05_RS23025 | 33002..33190 | - | 189 | WP_000957853.1 | hypothetical protein | - |
| JMV05_RS23030 | 33592..37686 | + | 4095 | WP_119182155.1 | serine protease autotransporter toxin SepA | - |
| JMV05_RS23035 | 37855..38469 | - | 615 | Protein_42 | IS21 family transposase ISEc10 | Transposase |
| JMV05_RS23040 | 38501..38950 | - | 450 | Protein_43 | IS66 family transposase ISEc23 | Transposase |
| JMV05_RS23045 | 38955..40164 | - | 1210 | Protein_44 | IS3 family transposase | - |
| JMV05_RS23050 | 40219..40500 | + | 282 | Protein_45 | transposase domain-containing protein | - |
| JMV05_RS23055 | 40573..40650 | - | 78 | Protein_46 | IS630 family transposase IS630 | Transposase |
| JMV05_RS23070 | 42791..44245 | + | 1455 | WP_000701110.1 | hypothetical protein | VF |
| JMV05_RS23075 | 44394..44522 | - | 129 | Protein_50 | IS5 family transposase ISSfl7 | Transposase |
| JMV05_RS23080 | 44694..45902 | - | 1209 | WP_162943489.1 | IS91 family transposase ISSbo1 | Transposase |
| JMV05_RS23085 | 45883..46156 | - | 274 | Protein_52 | hypothetical protein | - |
| JMV05_RS23090 | 46428..46730 | + | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JMV05_RS23095 | 46721..47203 | + | 483 | WP_025759928.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JMV05_RS23100 | 47277..47800 | + | 524 | Protein_55 | IS3 family transposase ISSfl11 | Transposase |
| JMV05_RS23105 | 47843..48181 | - | 339 | Protein_56 | IS3 family transposase IS629 | Transposase |
| JMV05_RS23110 | 48255..49423 | + | 1169 | WP_161550577.1 | IS3 family transposase ISLad1 | Transposase |
| JMV05_RS23115 | 49447..50190 | - | 744 | WP_256377549.1 | hypothetical protein | VF |
| JMV05_RS23120 | 50110..50807 | + | 698 | WP_225620296.1 | IS1 family transposase IS1X2 | Transposase |
| JMV05_RS23125 | 50824..50916 | - | 93 | Protein_60 | T3SS effector protein NleE | - |
| JMV05_RS23130 | 50972..51124 | + | 153 | Protein_61 | integrase core domain-containing protein | - |
| JMV05_RS23135 | 52505..53452 | + | 948 | WP_024260603.1 | Outer membrane protease IcsP | VF |
| JMV05_RS23140 | 54014..54386 | - | 373 | Protein_63 | IS3 family transposase IS2 | Transposase |
| JMV05_RS23145 | 54630..54749 | + | 120 | Protein_64 | Tn3 family transposase TnpA_ISNpu13 | Transposase |
| JMV05_RS23150 | 54999..55865 | + | 867 | WP_001046939.1 | hypothetical protein | VF |
| JMV05_RS23155 | 56194..56934 | + | 741 | WP_000850660.1 | PAP2 family phosphatase PhoN2 | - |
| JMV05_RS24750 | 57007..57129 | + | 123 | WP_000537156.1 | IS3 family transposase IS629 | Transposase |
| JMV05_RS23160 | 57287..58739 | - | 1453 | Protein_68 | hypothetical protein | VF |
| JMV05_RS23165 | 59106..59624 | - | 519 | Protein_69 | IS66 family transposase IS679 | Transposase |
| JMV05_RS23170 | 59641..60326 | - | 686 | Protein_70 | IS3 family transposase ISSfl11 | Transposase |
| JMV05_RS23175 | 60665..60931 | + | 267 | Protein_71 | hypothetical protein | - |
| JMV05_RS23180 | 61016..62725 | - | 1710 | WP_025759433.1 | ShET2/EspL2 family type III secretion system effector toxin | - |
| JMV05_RS23185 | 63157..63876 | - | 720 | WP_001121865.1 | type III secretion system effector phosphothreonine lyase | - |
| JMV05_RS23190 | 64001..64557 | - | 557 | Protein_74 | transposase | - |
| JMV05_RS23195 | 64541..64799 | + | 259 | Protein_75 | IS1 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|