MGE detailed information
MGE type: IScluster/Tn MGE length: 13479 bp
Accession: NZ_LR878366 Location: 107527..121005 Organism: Shigella flexneri 3a isolate 83 Replicon: plasmid 83_VP
Accession: NZ_LR878366 Location: 107527..121005 Organism: Shigella flexneri 3a isolate 83 Replicon: plasmid 83_VP
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMV05_RS23475 | 102571..103767 | + | 1197 | WP_207957285.1 | IS91 family transposase | - |
| JMV05_RS23480 | 104888..105745 | - | 858 | WP_000130973.1 | incFII family plasmid replication initiator RepA | - |
| JMV05_RS23485 | 105738..105812 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| JMV05_RS23490 | 106036..106296 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| JMV05_RS23495 | 106536..107126 | - | 591 | WP_000766825.1 | DUF2726 domain-containing protein | - |
| JMV05_RS23500 | 107165..107272 | - | 108 | Protein_136 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| JMV05_RS23505 | 107333..108030 | + | 698 | WP_225620362.1 | IS1 family transposase IS1X2 | Transposase |
| JMV05_RS23510 | 108053..108151 | - | 99 | Protein_138 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| JMV05_RS23515 | 108197..108460 | - | 264 | Protein_139 | thermonuclease family protein | - |
| JMV05_RS23520 | 108486..109642 | + | 1157 | WP_225620363.1 | IS3 family transposase ISSd1 | Transposase |
| JMV05_RS23525 | 109686..109925 | - | 240 | Protein_141 | thermonuclease family protein | - |
| JMV05_RS23530 | 110169..110381 | - | 213 | WP_004971339.1 | ANR family transcriptional regulator | - |
| JMV05_RS23535 | 110512..111072 | - | 561 | WP_025759958.1 | fertility inhibition protein FinO | - |
| JMV05_RS23540 | 111127..111873 | - | 747 | WP_000205722.1 | conjugal transfer pilus acetylase TraX | - |
| JMV05_RS23545 | 111893..113962 | - | 2070 | Protein_145 | Multifunctional conjugation protein TraI | Relaxase |
| JMV05_RS23555 | 114722..117941 | - | 3220 | Protein_147 | Multifunctional conjugation protein TraI | Relaxase |
| JMV05_RS23560 | 118023..118250 | + | 228 | WP_000450531.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| JMV05_RS23565 | 118250..118648 | + | 399 | WP_000911311.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JMV05_RS23570 | 118657..118836 | - | 180 | Protein_150 | hypothetical protein | - |
| JMV05_RS23575 | 118881..120037 | + | 1157 | WP_094099560.1 | IS3 family transposase ISSd1 | Transposase |
| JMV05_RS23580 | 120082..121005 | + | 924 | Protein_152 | IS630 family transposase IS630 | Transposase |
| JMV05_RS23585 | 121159..122103 | - | 945 | WP_004996485.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| JMV05_RS23590 | 122168..123118 | - | 951 | WP_025760081.1 | virulence factor VirK | - |
| JMV05_RS23595 | 123123..124211 | - | 1089 | WP_152030421.1 | putative hexosyltransferase CapU | - |
| JMV05_RS23600 | 124214..125056 | - | 843 | WP_050597877.1 | polysaccharide deacetylase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|