MGE detailed information
MGE type: IS/Tn MGE length: 504 bp
Accession: NZ_LR878365 Location: 3519324..3519827 Organism: Shigella flexneri 3a isolate 83 Replicon: chromosome
Accession: NZ_LR878365 Location: 3519324..3519827 Organism: Shigella flexneri 3a isolate 83 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMV05_RS17950 (3514638) | 3514638..3515096 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JMV05_RS17955 (3515358) | 3515358..3516815 | + | 1458 | WP_025759252.1 | cytosol nonspecific dipeptidase | - |
| JMV05_RS17960 (3516872) | 3516872..3517432 | - | 561 | Protein_3507 | peptide chain release factor H | - |
| JMV05_RS17965 (3517548) | 3517548..3518592 | - | 1045 | Protein_3508 | RNA ligase RtcB family protein | - |
| JMV05_RS17970 (3518838) | 3518838..3519290 | - | 453 | WP_001059862.1 | GNAT family N-acetyltransferase | - |
| JMV05_RS17980 (3520055) | 3520055..3520474 | - | 420 | WP_001263492.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JMV05_RS17985 (3520477) | 3520477..3520770 | - | 294 | WP_000554759.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JMV05_RS17990 (3520822) | 3520822..3521877 | - | 1056 | WP_001226172.1 | DNA polymerase IV | - |
| JMV05_RS17995 (3521948) | 3521948..3522733 | - | 786 | WP_000207560.1 | putative lateral flagellar export/assembly protein LafU | - |
| JMV05_RS18000 (3522705) | 3522705..3524417 | + | 1713 | Protein_3515 | flagellar biosynthesis protein FlhA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Shigella flexneri 5a str. M90T | NZ_CP037923 | 4168367..4168870 | 0.009 |