MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 121516 bp
Accession: NZ_LR822020 Location: 1206733..1328248 Organism: Streptococcus thermophilus isolate STH_CIRM_956 Replicon: chromosome
Accession: NZ_LR822020 Location: 1206733..1328248 Organism: Streptococcus thermophilus isolate STH_CIRM_956 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0514_RS06180 () | 1201885..1204707 | - | 2823 | WP_179972858.1 | phosphoenolpyruvate carboxylase | - |
| H0514_RS06185 () | 1204882..1205277 | - | 396 | WP_179972857.1 | DUF4430 domain-containing protein | - |
| H0514_RS06190 () | 1205274..1205747 | - | 474 | WP_179972856.1 | hypothetical protein | - |
| H0514_RS06195 () | 1205864..1206763 | - | 900 | WP_095559312.1 | zinc metalloprotease HtpX | - |
| H0514_RS06200 () | 1206765..1207325 | - | 561 | WP_084831058.1 | LemA family protein | - |
| H0514_RS06205 () | 1207476..1208488 | - | 1013 | Protein_1185 | hypothetical protein | VF |
| H0514_RS06210 () | 1208644..1208844 | - | 201 | Protein_1186 | PD-(D/E)XK nuclease family transposase | - |
| H0514_RS06215 () | 1209059..1210660 | - | 1602 | WP_084830566.1 | type I restriction-modification system subunit M | - |
| H0514_RS06220 () | 1210681..1210974 | - | 294 | WP_084830565.1 | helix-turn-helix transcriptional regulator | - |
| H0514_RS06225 () | 1210964..1211329 | - | 366 | Protein_1189 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H0514_RS06230 () | 1211495..1212727 | - | 1233 | WP_179972990.1 | restriction endonuclease subunit S | - |
| H0514_RS06235 () | 1212779..1213498 | - | 720 | WP_179972855.1 | hypothetical protein | - |
| H0514_RS06240 () | 1213665..1214807 | - | 1143 | WP_179972989.1 | phage abortive infection protein | - |
| H0514_RS06245 () | 1214829..1217824 | - | 2996 | Protein_1193 | type I restriction endonuclease subunit R | - |
| H0514_RS06250 () | 1217944..1218708 | - | 765 | WP_179972854.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| H0514_RS06255 () | 1218739..1219895 | - | 1157 | Protein_1195 | DUF2974 domain-containing protein | - |
| H0514_RS06260 () | 1220007..1220633 | + | 627 | WP_046206423.1 | Pr6Pr family membrane protein | - |
| H0514_RS06265 () | 1220889..1221278 | + | 390 | WP_179972853.1 | sodium transporter | - |
| H0514_RS06270 () | 1221469..1222416 | + | 948 | WP_179972852.1 | glycoside hydrolase family 25 protein | - |
| H0514_RS06275 () | 1222530..1223003 | + | 474 | WP_100273416.1 | aminoacyl-tRNA deacylase | - |
| H0514_RS06280 () | 1223006..1223644 | + | 639 | WP_100273417.1 | histidine phosphatase family protein | - |
| H0514_RS06285 () | 1224076..1224978 | - | 903 | WP_179972851.1 | HAD family hydrolase | - |
| H0514_RS06290 () | 1225362..1225779 | - | 418 | Protein_1202 | hypothetical protein | - |
| H0514_RS06295 () | 1225793..1227075 | - | 1283 | Protein_1203 | LysM peptidoglycan-binding domain-containing protein | - |
| H0514_RS06300 () | 1227204..1228694 | + | 1491 | WP_179972850.1 | lysine--tRNA ligase | - |
| H0514_RS06305 () | 1229785..1230834 | - | 1050 | WP_096040553.1 | DUF389 domain-containing protein | - |
| H0514_RS06310 () | 1231725..1232915 | + | 1191 | WP_130554372.1 | IS256 family transposase ISLgar5 | Transposase |
| H0514_RS06315 () | 1232966..1233229 | - | 264 | Protein_1207 | toll/interleukin-1 receptor domain-containing protein | - |
| H0514_RS06320 () | 1233665..1233868 | - | 204 | WP_125337947.1 | CsbD family protein | - |
| H0514_RS06325 () | 1233914..1234167 | - | 254 | Protein_1209 | hypothetical protein | - |
| H0514_RS06330 () | 1234164..1234523 | - | 360 | WP_006155628.1 | rhodanese-like domain-containing protein | - |
| H0514_RS06335 () | 1234542..1235075 | - | 534 | WP_179972510.1 | MarR family transcriptional regulator | - |
| H0514_RS06340 () | 1235098..1235457 | - | 360 | WP_006155628.1 | rhodanese-like domain-containing protein | - |
| H0514_RS06345 () | 1235476..1236009 | - | 534 | WP_179972510.1 | MarR family transcriptional regulator | - |
| H0514_RS06350 () | 1236032..1236391 | - | 360 | WP_006155628.1 | rhodanese-like domain-containing protein | - |
| H0514_RS06355 () | 1236558..1236887 | - | 330 | WP_179972509.1 | VOC family protein | - |
| H0514_RS06360 () | 1236905..1237819 | - | 915 | WP_179972508.1 | hypothetical protein | - |
| H0514_RS06365 () | 1237846..1239105 | - | 1260 | WP_179972507.1 | beta-ketoacyl-[acyl-carrier-protein] synthase family protein | - |
| H0514_RS06370 () | 1239121..1239870 | - | 750 | WP_179972506.1 | cyclase family protein | - |
| H0514_RS06375 () | 1239860..1240582 | - | 723 | WP_179972505.1 | hypothetical protein | - |
| H0514_RS06380 () | 1240627..1240758 | - | 132 | WP_179972504.1 | NAD(P)-binding protein | - |
| H0514_RS06385 () | 1240870..1241775 | + | 906 | WP_179972503.1 | DNA-3-methyladenine glycosylase | - |
| H0514_RS06390 () | 1241772..1242767 | + | 996 | WP_006149302.1 | class I SAM-dependent methyltransferase | - |
| H0514_RS06395 () | 1242915..1243835 | - | 921 | WP_179972502.1 | helix-turn-helix domain-containing protein | - |
| H0514_RS06400 () | 1244013..1244456 | + | 444 | WP_179972501.1 | hypothetical protein | - |
| H0514_RS06405 () | 1244740..1245162 | + | 423 | WP_045768735.1 | hypothetical protein | - |
| H0514_RS06410 () | 1245165..1246193 | + | 1029 | WP_046165023.1 | replication initiation factor domain-containing protein | - |
| H0514_RS06415 () | 1246254..1246514 | + | 261 | WP_061599972.1 | helix-turn-helix domain-containing protein | - |
| H0514_RS06420 () | 1246585..1247802 | + | 1218 | WP_111679105.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| H0514_RS06425 () | 1248769..1249482 | - | 714 | WP_179973144.1 | hypothetical protein | - |
| H0514_RS06430 () | 1250938..1251021 | + | 84 | WP_179973374.1 | hypothetical protein | - |
| H0514_RS06435 () | 1251407..1252327 | - | 921 | WP_179973145.1 | DNA adenine methylase | - |
| H0514_RS06440 () | 1252317..1253537 | - | 1221 | WP_179973375.1 | DNA adenine methylase | - |
| H0514_RS06445 () | 1253648..1254118 | - | 471 | WP_179973146.1 | S24 family peptidase | - |
| H0514_RS06450 () | 1254191..1254487 | - | 297 | WP_179973147.1 | hypothetical protein | - |
| H0514_RS06455 () | 1254480..1254842 | - | 363 | WP_179973148.1 | hypothetical protein | - |
| H0514_RS06460 () | 1254839..1256254 | - | 1416 | WP_179973149.1 | Y-family DNA polymerase | - |
| H0514_RS06465 () | 1256257..1256934 | - | 678 | WP_179973150.1 | LexA family transcriptional regulator | - |
| H0514_RS06470 () | 1256937..1257800 | - | 864 | WP_179973151.1 | ImmA/IrrE family metallo-endopeptidase | - |
| H0514_RS06475 () | 1257896..1258060 | - | 165 | WP_179973152.1 | hypothetical protein | - |
| H0514_RS06480 () | 1258077..1258736 | - | 660 | WP_179973153.1 | hypothetical protein | - |
| H0514_RS06485 () | 1258830..1260401 | - | 1572 | WP_179973154.1 | hypothetical protein | - |
| H0514_RS06490 () | 1260626..1260988 | + | 363 | WP_179973155.1 | hypothetical protein | - |
| H0514_RS06495 () | 1261017..1262189 | - | 1173 | WP_179973156.1 | hypothetical protein | - |
| H0514_RS06500 () | 1262195..1262374 | - | 180 | WP_039670443.1 | ISNCY family transposase ISH7A | Transposase |
| H0514_RS06505 () | 1262371..1262712 | - | 342 | WP_039670442.1 | helix-turn-helix transcriptional regulator | - |
| H0514_RS06510 () | 1263323..1263571 | + | 249 | WP_179973157.1 | hypothetical protein | - |
| H0514_RS06515 () | 1263608..1263904 | + | 297 | WP_155778346.1 | cytoplasmic protein | - |
| H0514_RS06520 () | 1263923..1264378 | + | 456 | WP_155778345.1 | conjugal transfer protein | - |
| H0514_RS06525 () | 1264394..1266085 | + | 1692 | WP_179973158.1 | cell division protein FtsK | - |
| H0514_RS06530 () | 1266294..1267553 | + | 1260 | WP_179973159.1 | replication initiation factor domain-containing protein | - |
| H0514_RS06535 () | 1267537..1267767 | + | 231 | WP_017649868.1 | hypothetical protein | - |
| H0514_RS06540 () | 1267788..1268339 | + | 552 | WP_101750356.1 | conjugal transfer protein | - |
| H0514_RS06545 () | 1268352..1269332 | + | 981 | WP_179973160.1 | conjugal transfer protein | - |
| H0514_RS06550 () | 1269338..1269562 | + | 225 | WP_003104677.1 | hypothetical protein | - |
| H0514_RS06555 () | 1269564..1269986 | + | 423 | WP_179973161.1 | conjugal transfer protein | - |
| H0514_RS06560 () | 1269999..1272503 | + | 2505 | WP_179973162.1 | ATP-binding protein | - |
| H0514_RS06565 () | 1272518..1274431 | + | 1914 | WP_179973163.1 | conjugal transfer protein | - |
| H0514_RS06570 () | 1274418..1274645 | + | 228 | WP_006531355.1 | hypothetical protein | - |
| H0514_RS06575 () | 1274664..1275776 | + | 1113 | WP_179973164.1 | CHAP domain-containing protein | - |
| H0514_RS06580 () | 1275888..1276478 | + | 591 | WP_100273736.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| H0514_RS06585 () | 1276475..1277311 | + | 837 | WP_100273737.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| H0514_RS06590 () | 1277496..1277693 | + | 198 | WP_006738512.1 | helix-turn-helix domain-containing protein | - |
| H0514_RS06595 () | 1277759..1279009 | + | 1251 | WP_082663094.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| H0514_RS06600 () | 1279799..1282684 | + | 2886 | WP_179973165.1 | DEAD/DEAH box helicase | - |
| H0514_RS06605 () | 1282707..1283096 | - | 390 | WP_002946228.1 | (deoxy)nucleoside triphosphate pyrophosphohydrolase | - |
| H0514_RS06610 () | 1283158..1283467 | - | 310 | Protein_1266 | hypothetical protein | - |
| H0514_RS06615 () | 1283662..1284996 | + | 1335 | WP_179973166.1 | Nramp family divalent metal transporter | - |
| H0514_RS06620 () | 1285031..1285243 | - | 213 | WP_002886106.1 | YdbC family protein | - |
| H0514_RS06625 () | 1285368..1285652 | + | 285 | WP_179972830.1 | hypothetical protein | - |
| H0514_RS06630 () | 1285725..1286264 | + | 540 | WP_179973167.1 | biotin transporter BioY | - |
| H0514_RS06635 () | 1286315..1286632 | - | 318 | WP_179973168.1 | hypothetical protein | - |
| H0514_RS06640 () | 1286632..1287918 | - | 1287 | WP_179973169.1 | U32 family peptidase | - |
| H0514_RS06645 () | 1288014..1288943 | - | 930 | WP_179973170.1 | U32 family peptidase | - |
| H0514_RS06650 () | 1289174..1289470 | + | 297 | WP_179972827.1 | DUF3270 domain-containing protein | - |
| H0514_RS06655 () | 1289491..1289931 | - | 441 | WP_179972826.1 | YtxH domain-containing protein | - |
| H0514_RS06660 () | 1289944..1290342 | - | 399 | WP_179972825.1 | DUF948 domain-containing protein | - |
| H0514_RS06665 () | 1290464..1291255 | - | 792 | WP_179972824.1 | prolipoprotein diacylglyceryl transferase | - |
| H0514_RS06670 () | 1291255..1292184 | - | 930 | WP_179972823.1 | HPr kinase/phosphorylase | - |
| H0514_RS06675 () | 1292313..1292576 | - | 264 | WP_111679528.1 | PspC domain-containing protein | - |
| H0514_RS06680 () | 1292641..1293081 | - | 441 | WP_179973171.1 | SprT family protein | - |
| H0514_RS06685 () | 1293068..1295200 | - | 2133 | WP_179973172.1 | RNA-binding transcriptional accessory protein | - |
| H0514_RS06690 () | 1295564..1296466 | + | 903 | WP_179973173.1 | permease | - |
| H0514_RS06695 () | 1296466..1297281 | + | 816 | WP_082308887.1 | TIGR03943 family protein | - |
| H0514_RS06700 () | 1298609..1299661 | - | 1053 | WP_179973174.1 | hypothetical protein | - |
| H0514_RS06705 () | 1299658..1299981 | - | 324 | WP_176243456.1 | CRISPR-associated endonuclease Cas2 | - |
| H0514_RS06710 () | 1299983..1300896 | - | 914 | Protein_1286 | type II CRISPR-associated endonuclease Cas1 | - |
| H0514_RS06715 () | 1301073..1304438 | - | 3366 | WP_179973175.1 | type II CRISPR RNA-guided endonuclease Cas9 | - |
| H0514_RS06720 () | 1304695..1305306 | - | 612 | WP_024704046.1 | hypothetical protein | - |
| H0514_RS06725 () | 1305402..1305769 | - | 368 | Protein_1289 | hypothetical protein | - |
| H0514_RS06730 () | 1305796..1306406 | - | 611 | Protein_1290 | CPBP family intramembrane metalloprotease | - |
| H0514_RS06735 () | 1306511..1306873 | - | 363 | WP_179973376.1 | hypothetical protein | - |
| H0514_RS06740 () | 1307269..1307631 | - | 363 | WP_179973176.1 | TIGR02328 family protein | - |
| H0514_RS06745 () | 1307628..1308020 | - | 393 | WP_179973177.1 | YbgA family protein | - |
| H0514_RS06750 () | 1308236..1308617 | + | 382 | Protein_1294 | lipocalin/fatty acid-binding family protein | - |
| H0514_RS06755 () | 1309088..1310198 | - | 1111 | Protein_1295 | IS3 family transposase | - |
| H0514_RS06760 () | 1310184..1310724 | + | 541 | Protein_1296 | hypothetical protein | - |
| H0514_RS06765 () | 1311568..1312134 | - | 567 | WP_082308878.1 | hypothetical protein | - |
| H0514_RS06770 () | 1312314..1312853 | - | 540 | WP_179973377.1 | GNAT family N-acetyltransferase | - |
| H0514_RS06775 () | 1312882..1313118 | - | 237 | WP_179973178.1 | competence protein TfoX | - |
| H0514_RS06780 () | 1313402..1314772 | - | 1371 | WP_179973179.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| H0514_RS06785 () | 1314988..1315536 | + | 549 | WP_179973180.1 | carboxymuconolactone decarboxylase family protein | - |
| H0514_RS06790 () | 1315576..1316640 | + | 1065 | WP_179973181.1 | acyl-CoA/acyl-ACP dehydrogenase | - |
| H0514_RS06795 () | 1316656..1317570 | + | 915 | WP_179973182.1 | ethanolamine utilization protein EutJ | - |
| H0514_RS06800 () | 1317608..1319038 | - | 1431 | WP_179973183.1 | LCP family protein | - |
| H0514_RS06805 () | 1319050..1319874 | - | 825 | WP_179966987.1 | prephenate dehydratase | - |
| H0514_RS06810 () | 1319865..1320356 | - | 492 | WP_002950265.1 | shikimate kinase | - |
| H0514_RS06815 () | 1320349..1321632 | - | 1284 | WP_095559294.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| H0514_RS06820 () | 1321716..1322663 | - | 948 | WP_179973184.1 | L-lactate dehydrogenase | - |
| H0514_RS06825 () | 1322719..1323057 | - | 339 | WP_179972809.1 | YlbF/YmcA family competence regulator | - |
| H0514_RS06830 () | 1323067..1324173 | - | 1107 | WP_164177992.1 | prephenate dehydrogenase | - |
| H0514_RS06835 () | 1324203..1325369 | - | 1167 | WP_011225712.1 | chorismate synthase | - |
| H0514_RS06840 () | 1325370..1326437 | - | 1068 | WP_179973185.1 | 3-dehydroquinate synthase | - |
| H0514_RS06845 () | 1326450..1327307 | - | 858 | WP_179973186.1 | shikimate dehydrogenase | - |
| H0514_RS06850 () | 1327297..1327974 | - | 678 | WP_002947238.1 | type I 3-dehydroquinate dehydratase | - |
| H0514_RS06855 () | 1327971..1329134 | - | 1164 | WP_100273093.1 | class I SAM-dependent rRNA methyltransferase | - |
| H0514_RS06860 () | 1329305..1331491 | + | 2187 | WP_179973187.1 | LTA synthase family protein | - |
| H0514_RS06865 () | 1331653..1331838 | + | 186 | WP_179973188.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|