MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 105867 bp
Accession: NZ_LR822017 Location: 609101..714967 Organism: Streptococcus thermophilus isolate STH_CIRM_336 Replicon: chromosome
Accession: NZ_LR822017 Location: 609101..714967 Organism: Streptococcus thermophilus isolate STH_CIRM_336 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0511_RS03205 () | 605754..606350 | + | 597 | WP_011225694.1 | recombination mediator RecR | - |
| H0511_RS03210 () | 606491..606862 | + | 372 | WP_011225695.1 | PRD domain-containing protein | - |
| H0511_RS03215 () | 606838..606936 | + | 99 | WP_080998445.1 | hypothetical protein | - |
| H0511_RS03220 () | 606970..607236 | + | 267 | WP_179974358.1 | PRD domain-containing protein | - |
| H0511_RS03225 () | 607507..608004 | + | 498 | WP_002950224.1 | rRNA maturation RNase YbeY | - |
| H0511_RS03230 () | 607985..608389 | + | 405 | WP_179974359.1 | diacylglycerol kinase family protein | - |
| H0511_RS03235 () | 608408..609307 | + | 900 | WP_002950226.1 | GTPase Era | - |
| H0511_RS03240 () | 609354..610175 | + | 822 | WP_179974360.1 | DNA-formamidopyrimidine glycosylase | - |
| H0511_RS03245 () | 610172..610765 | + | 594 | WP_179974519.1 | dephospho-CoA kinase | - |
| H0511_RS03250 () | 610816..612039 | + | 1224 | WP_179974361.1 | multidrug efflux MFS transporter | - |
| H0511_RS03255 () | 612029..612175 | + | 147 | WP_179974362.1 | 50S ribosomal protein L33 | - |
| H0511_RS03260 () | 612221..612457 | + | 237 | WP_011680932.1 | preprotein translocase subunit SecG | - |
| H0511_RS03265 () | 612517..614919 | + | 2403 | WP_179974363.1 | ribonuclease R | - |
| H0511_RS03270 () | 614993..615457 | + | 465 | WP_002950240.1 | SsrA-binding protein SmpB | - |
| H0511_RS03275 () | 615612..617018 | + | 1407 | WP_179974364.1 | Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase | VF |
| H0511_RS03280 () | 617020..617391 | + | 372 | WP_179972800.1 | S1 RNA-binding domain-containing protein | - |
| H0511_RS03285 () | 617490..618575 | - | 1086 | WP_179972801.1 | Xaa-Pro peptidase family protein | - |
| H0511_RS03290 () | 618892..619893 | + | 1002 | WP_179972802.1 | catabolite control protein A | - |
| H0511_RS03295 () | 619954..621021 | + | 1068 | WP_179972803.1 | MmcQ/YjbR family DNA-binding protein | - |
| H0511_RS03300 () | 621034..622149 | + | 1116 | WP_179972985.1 | glycerate kinase | - |
| H0511_RS03305 () | 622188..622643 | - | 456 | WP_179974365.1 | YueI family protein | - |
| H0511_RS03310 () | 622853..624157 | + | 1305 | WP_179973189.1 | phosphopyruvate hydratase | - |
| H0511_RS03315 () | 624308..624492 | - | 185 | Protein_593 | hypothetical protein | - |
| H0511_RS03320 () | 624655..626841 | - | 2187 | WP_179974366.1 | LTA synthase family protein | - |
| H0511_RS03325 () | 627015..628178 | + | 1164 | WP_179974367.1 | class I SAM-dependent rRNA methyltransferase | - |
| H0511_RS03330 () | 628175..628852 | + | 678 | WP_179974368.1 | type I 3-dehydroquinate dehydratase | - |
| H0511_RS03335 () | 628842..629699 | + | 858 | WP_179974369.1 | shikimate dehydrogenase | - |
| H0511_RS03340 () | 629712..630779 | + | 1068 | WP_179974370.1 | 3-dehydroquinate synthase | - |
| H0511_RS03345 () | 630780..631946 | + | 1167 | WP_011225712.1 | chorismate synthase | - |
| H0511_RS03350 () | 631976..633082 | + | 1107 | WP_179974371.1 | prephenate dehydrogenase | - |
| H0511_RS03355 () | 633092..633430 | + | 339 | WP_179974372.1 | YlbF/YmcA family competence regulator | - |
| H0511_RS03360 () | 633486..634436 | + | 951 | WP_179974373.1 | L-lactate dehydrogenase | - |
| H0511_RS03365 () | 634517..635800 | + | 1284 | WP_179974374.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| H0511_RS03370 () | 635793..636284 | + | 492 | WP_179972812.1 | shikimate kinase | - |
| H0511_RS03375 () | 636275..637099 | + | 825 | WP_179974375.1 | prephenate dehydratase | - |
| H0511_RS03380 () | 637111..638541 | + | 1431 | WP_179974376.1 | LCP family protein | - |
| H0511_RS03385 () | 638579..639493 | - | 915 | WP_179973182.1 | ethanolamine utilization protein EutJ | - |
| H0511_RS03390 () | 639509..640573 | - | 1065 | WP_179974377.1 | acyl-CoA/acyl-ACP dehydrogenase | - |
| H0511_RS03395 () | 640613..641161 | - | 549 | WP_179973180.1 | carboxymuconolactone decarboxylase family protein | - |
| H0511_RS03400 () | 641377..642747 | + | 1371 | WP_179973179.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| H0511_RS03405 () | 643030..643261 | + | 232 | Protein_611 | competence protein TfoX | - |
| H0511_RS03410 () | 643290..643829 | + | 540 | WP_179974520.1 | GNAT family N-acetyltransferase | - |
| H0511_RS03415 () | 644009..644575 | + | 567 | WP_179974378.1 | hypothetical protein | - |
| H0511_RS03420 () | 645419..645958 | - | 540 | Protein_614 | hypothetical protein | - |
| H0511_RS03425 () | 645944..647055 | + | 1112 | WP_179974379.1 | IS3 family transposase IS981 | Transposase |
| H0511_RS03430 () | 647526..647954 | - | 429 | Protein_616 | lipocalin/fatty acid-binding family protein | - |
| H0511_RS03435 () | 648122..648514 | + | 393 | WP_024704042.1 | YbgA family protein | - |
| H0511_RS03440 () | 648511..648873 | + | 363 | WP_024704043.1 | TIGR02328 family protein | - |
| H0511_RS03445 () | 648886..649263 | + | 378 | Protein_619 | hypothetical protein | - |
| H0511_RS03450 () | 649268..649630 | + | 363 | WP_084828663.1 | hypothetical protein | - |
| H0511_RS03455 () | 649735..650346 | + | 612 | Protein_621 | CPBP family intramembrane metalloprotease | - |
| H0511_RS03460 () | 650373..650740 | + | 368 | Protein_622 | hypothetical protein | - |
| H0511_RS03465 () | 650836..651447 | + | 612 | WP_024704046.1 | hypothetical protein | - |
| H0511_RS03470 () | 651703..655068 | + | 3366 | WP_179974380.1 | type II CRISPR RNA-guided endonuclease Cas9 | - |
| H0511_RS03475 () | 655245..656156 | + | 912 | WP_179974381.1 | type II CRISPR-associated endonuclease Cas1 | - |
| H0511_RS03480 () | 656158..656481 | + | 324 | WP_179974382.1 | CRISPR-associated endonuclease Cas2 | - |
| H0511_RS03485 () | 656478..657530 | + | 1053 | WP_179974383.1 | hypothetical protein | - |
| H0511_RS03490 () | 658662..659477 | - | 816 | WP_179974384.1 | TIGR03943 family protein | - |
| H0511_RS03495 () | 659477..660379 | - | 903 | WP_179974385.1 | permease | - |
| H0511_RS03500 () | 660743..662875 | + | 2133 | WP_179974386.1 | RNA-binding transcriptional accessory protein | - |
| H0511_RS03505 () | 662862..663302 | + | 441 | WP_179974387.1 | SprT family protein | - |
| H0511_RS03510 () | 663368..663631 | + | 264 | WP_179974388.1 | PspC domain-containing protein | - |
| H0511_RS03515 () | 663759..664688 | + | 930 | WP_179974389.1 | HPr kinase/phosphorylase | - |
| H0511_RS03520 () | 664688..665479 | + | 792 | WP_179972824.1 | prolipoprotein diacylglyceryl transferase | - |
| H0511_RS03525 () | 665601..665999 | + | 399 | WP_179972825.1 | DUF948 domain-containing protein | - |
| H0511_RS03530 () | 666012..666452 | + | 441 | WP_179974390.1 | YtxH domain-containing protein | - |
| H0511_RS03535 () | 666473..666769 | - | 297 | WP_179972827.1 | DUF3270 domain-containing protein | - |
| H0511_RS03540 () | 667000..667929 | + | 930 | WP_179973170.1 | U32 family peptidase | - |
| H0511_RS03545 () | 668025..669311 | + | 1287 | WP_179973169.1 | U32 family peptidase | - |
| H0511_RS03550 () | 669311..669628 | + | 318 | WP_179973168.1 | hypothetical protein | - |
| H0511_RS03555 () | 669679..670218 | - | 540 | WP_179974391.1 | biotin transporter BioY | - |
| H0511_RS03560 () | 670313..670597 | - | 285 | WP_179972830.1 | hypothetical protein | - |
| H0511_RS03565 () | 670722..670934 | + | 213 | WP_002886106.1 | YdbC family protein | - |
| H0511_RS03570 () | 670968..672302 | - | 1335 | WP_179973166.1 | Nramp family divalent metal transporter | - |
| H0511_RS03575 () | 672497..672805 | + | 309 | Protein_645 | hypothetical protein | - |
| H0511_RS03580 () | 673404..674654 | - | 1251 | WP_179974392.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| H0511_RS03585 () | 674720..674917 | - | 198 | WP_006738512.1 | helix-turn-helix domain-containing protein | - |
| H0511_RS03590 () | 675102..675938 | - | 837 | WP_179974393.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| H0511_RS03595 () | 675935..676525 | - | 591 | WP_179974394.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| H0511_RS03600 () | 676637..677758 | - | 1122 | WP_179974395.1 | CHAP domain-containing protein | - |
| H0511_RS03605 () | 677777..678004 | - | 228 | WP_179974396.1 | hypothetical protein | - |
| H0511_RS03610 () | 677991..679892 | - | 1902 | WP_179974397.1 | conjugal transfer protein | - |
| H0511_RS03615 () | 679907..681934 | - | 2028 | WP_179974398.1 | ATP-binding protein | - |
| H0511_RS03620 () | 681947..682369 | - | 423 | WP_179974399.1 | conjugal transfer protein | - |
| H0511_RS03625 () | 682371..682595 | - | 225 | WP_003104677.1 | hypothetical protein | - |
| H0511_RS03630 () | 682601..683581 | - | 981 | WP_179974400.1 | conjugal transfer protein | - |
| H0511_RS03635 () | 683594..684145 | - | 552 | WP_179974401.1 | conjugal transfer protein | - |
| H0511_RS03640 () | 684166..684396 | - | 231 | WP_017649868.1 | hypothetical protein | - |
| H0511_RS03645 () | 684380..685639 | - | 1260 | WP_179974402.1 | replication initiation factor domain-containing protein | - |
| H0511_RS03650 () | 685848..687464 | - | 1617 | WP_179974403.1 | cell division protein FtsK | - |
| H0511_RS03655 () | 687557..688012 | - | 456 | WP_179974404.1 | conjugal transfer protein | - |
| H0511_RS03660 () | 688031..688327 | - | 297 | WP_179974405.1 | cytoplasmic protein | - |
| H0511_RS03665 () | 688364..688612 | - | 249 | WP_179973157.1 | hypothetical protein | - |
| H0511_RS03670 () | 689223..689564 | + | 342 | WP_179974521.1 | helix-turn-helix domain-containing protein | - |
| H0511_RS03675 () | 689561..689740 | + | 180 | WP_179974406.1 | ISNCY family transposase ISH7A | Transposase |
| H0511_RS03680 () | 689746..690918 | + | 1173 | WP_179974407.1 | hypothetical protein | - |
| H0511_RS03685 () | 690921..691310 | - | 390 | WP_179974522.1 | hypothetical protein | - |
| H0511_RS03690 () | 691502..692351 | + | 850 | Protein_668 | ImmA/IrrE family metallo-endopeptidase | - |
| H0511_RS03695 () | 692354..693031 | + | 678 | WP_179974408.1 | helix-turn-helix domain-containing protein | - |
| H0511_RS03700 () | 693034..694449 | + | 1416 | WP_179974409.1 | Y-family DNA polymerase | - |
| H0511_RS03705 () | 694449..694814 | + | 366 | WP_100273720.1 | hypothetical protein | - |
| H0511_RS03710 () | 694807..695106 | + | 300 | WP_100273739.1 | hypothetical protein | - |
| H0511_RS03715 () | 695502..696992 | - | 1491 | WP_179974410.1 | lysine--tRNA ligase | - |
| H0511_RS03720 () | 697121..698403 | + | 1283 | Protein_674 | LysM peptidoglycan-binding domain-containing protein | - |
| H0511_RS03725 () | 698417..698834 | + | 418 | Protein_675 | hypothetical protein | - |
| H0511_RS03730 () | 699217..700119 | + | 903 | WP_179974411.1 | HAD family hydrolase | - |
| H0511_RS03735 () | 700543..701181 | - | 639 | WP_100273417.1 | histidine phosphatase family protein | - |
| H0511_RS03740 () | 701184..701657 | - | 474 | WP_100273416.1 | aminoacyl-tRNA deacylase | - |
| H0511_RS03745 () | 701771..702718 | - | 948 | WP_179974412.1 | glycoside hydrolase family 25 protein | - |
| H0511_RS03750 () | 703066..703455 | - | 390 | WP_179974413.1 | sodium transporter | - |
| H0511_RS03755 () | 703715..704341 | - | 627 | WP_100273414.1 | Pr6Pr family membrane protein | - |
| H0511_RS03760 () | 704453..705070 | + | 618 | Protein_682 | hypothetical protein | - |
| H0511_RS03765 () | 705101..705865 | + | 765 | WP_179974414.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| H0511_RS03770 () | 705986..708976 | + | 2991 | WP_179974415.1 | type I restriction endonuclease subunit R | - |
| H0511_RS03775 () | 708982..710109 | + | 1128 | WP_179974416.1 | hypothetical protein | - |
| H0511_RS03780 () | 710151..710402 | + | 252 | WP_024704057.1 | hypothetical protein | - |
| H0511_RS03785 () | 710711..711103 | + | 393 | WP_179974417.1 | hypothetical protein | - |
| H0511_RS03790 () | 711204..711437 | + | 234 | WP_179974418.1 | hypothetical protein | - |
| H0511_RS03795 () | 711485..712645 | + | 1161 | WP_100273616.1 | restriction endonuclease subunit S | - |
| H0511_RS03800 () | 712660..714523 | + | 1864 | Protein_690 | NTPase | - |
| H0511_RS03805 () | 714551..715303 | + | 753 | WP_179974419.1 | hypothetical protein | - |
| H0511_RS03810 () | 715346..716950 | + | 1605 | WP_179974420.1 | type I restriction-modification system subunit M | - |
| H0511_RS03815 () | 717028..717447 | + | 420 | Protein_693 | PD-(D/E)XK nuclease family transposase | - |
| H0511_RS03820 () | 717548..718550 | + | 1003 | Protein_694 | DNA/RNA non-specific endonuclease | - |
| H0511_RS03825 () | 718700..719260 | + | 561 | WP_084831058.1 | LemA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|