MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 170812 bp
Accession: NZ_LR782232 Location: 1489268..1660079 Organism: Escherichia coli isolate SC467 Replicon: chromosome
Accession: NZ_LR782232 Location: 1489268..1660079 Organism: Escherichia coli isolate SC467 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV361_RS07075 () | 1487412..1488710 | + | 1299 | WP_000841103.1 | alpha-ketoglutarate permease | - |
| HV361_RS07080 () | 1488707..1489030 | - | 324 | WP_001300818.1 | YfiM family lipoprotein | - |
| HV361_RS07085 () | 1489076..1490431 | - | 1356 | WP_000949265.1 | CDP-diacylglycerol--serine O-phosphatidyltransferase | - |
| HV361_RS07090 () | 1490545..1493205 | - | 2661 | WP_000082964.1 | protein lysine acetyltransferase | - |
| HV361_RS07095 () | 1493237..1493935 | - | 699 | WP_001343689.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| HV361_RS07100 () | 1494004..1494423 | - | 420 | WP_001098726.1 | thioredoxin TrxC | - |
| HV361_RS07105 () | 1494630..1495667 | + | 1038 | WP_175055359.1 | tRNA/rRNA methyltransferase | - |
| HV361_RS07110 () | 1495715..1496404 | - | 690 | WP_001262716.1 | uracil-DNA glycosylase | - |
| HV361_RS07115 () | 1496709..1497092 | + | 384 | WP_000627807.1 | autonomous glycyl radical cofactor GrcA | - |
| HV361_RS07120 () | 1497148..1497735 | - | 588 | WP_000189207.1 | cysteine/O-acetylserine transporter | - |
| HV361_RS07125 () | 1497838..1498719 | + | 882 | WP_000365855.1 | LysR family transcriptional regulator | - |
| HV361_RS07130 () | 1498928..1500262 | - | 1335 | WP_038996252.1 | ATP-dependent RNA helicase SrmB | - |
| HV361_RS07135 () | 1500394..1501131 | + | 738 | WP_001298974.1 | tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN | - |
| HV361_RS07140 () | 1501116..1502738 | - | 1623 | WP_001094499.1 | L-aspartate oxidase | - |
| HV361_RS07145 () | 1502994..1503149 | + | 156 | WP_001303621.1 | rpoE leader peptide RseD | - |
| HV361_RS07150 () | 1503146..1503721 | + | 576 | WP_001295364.1 | ECF RNA polymerase sigma-E factor | VF |
| HV361_RS07155 () | 1503754..1504404 | + | 651 | WP_001168459.1 | Anti-sigma-E factor RseA | VF |
| HV361_RS07160 () | 1504404..1505360 | + | 957 | WP_000812053.1 | Sigma-E factor regulatory protein RseB | VF |
| HV361_RS07165 () | 1505357..1505836 | + | 480 | WP_000589070.1 | Protein RseC | VF |
| HV361_RS07170 () | 1506034..1507833 | + | 1800 | WP_000790168.1 | translation elongation factor 4 | - |
| HV361_RS07175 () | 1507849..1508823 | + | 975 | WP_000002542.1 | signal peptidase I | - |
| HV361_RS07180 () | 1509096..1509776 | + | 681 | WP_001068343.1 | ribonuclease III | - |
| HV361_RS07185 () | 1509773..1510678 | + | 906 | WP_000020737.1 | GTPase Era | - |
| HV361_RS07190 () | 1510690..1511418 | + | 729 | WP_000399393.1 | DNA repair protein RecO | - |
| HV361_RS07195 () | 1511430..1512161 | + | 732 | WP_001297412.1 | Pyridoxine 5'-phosphate synthase | VF |
| HV361_RS07200 () | 1512161..1512541 | + | 381 | WP_000986029.1 | holo-ACP synthase | - |
| - () | 1512562..1512638 | - | 77 | NuclAT_11 | - | - |
| - () | 1512562..1512638 | - | 77 | NuclAT_11 | - | - |
| - () | 1512562..1512638 | - | 77 | NuclAT_11 | - | - |
| - () | 1512562..1512638 | - | 77 | NuclAT_11 | - | - |
| HV361_RS07205 () | 1512961..1513041 | + | 81 | WP_000128776.1 | type I toxin-antitoxin system toxin ShoB | - |
| HV361_RS07210 () | 1513235..1513495 | - | 261 | WP_001196283.1 | 4Fe-4S dicluster ferredoxin YfhL | - |
| HV361_RS07215 () | 1513551..1514400 | - | 850 | Protein_1398 | MurR/RpiR family transcriptional regulator | - |
| HV361_RS07220 () | 1514609..1515244 | + | 636 | WP_000190655.1 | phosphatidylglycerophosphatase C | - |
| HV361_RS07225 () | 1515269..1515805 | + | 537 | WP_001295367.1 | tRNA adenosine(34) deaminase TadA | - |
| HV361_RS07230 () | 1515802..1517358 | - | 1557 | WP_000734212.1 | membrane-bound lytic murein transglycosylase MltF | - |
| HV361_RS07235 () | 1517616..1521503 | + | 3888 | WP_000970115.1 | phosphoribosylformylglycinamidine synthase | - |
| HV361_RS07240 () | 1522079..1523506 | + | 1428 | WP_137523160.1 | two component system sensor histidine kinase QseE/GlrK | - |
| HV361_RS07245 () | 1523671..1524384 | + | 714 | WP_001215888.1 | two-component system QseEF-associated lipoprotein QseG | - |
| HV361_RS07250 () | 1524374..1525708 | + | 1335 | WP_001298983.1 | Transcriptional regulatory protein QseF | VF |
| HV361_RS07255 () | 1525769..1526107 | + | 339 | WP_000717694.1 | nitrogen regulatory protein P-II | - |
| HV361_RS07260 () | 1526152..1527342 | - | 1191 | WP_000883085.1 | NO-inducible flavohemoprotein | - |
| HV361_RS07265 () | 1527670..1528923 | + | 1254 | WP_000919159.1 | serine hydroxymethyltransferase | - |
| HV361_RS07270 () | 1528987..1530180 | - | 1194 | WP_001299519.1 | ROK family protein | - |
| HV361_RS07275 () | 1530298..1533579 | + | 3282 | WP_038996261.1 | DUF5107 domain-containing protein | - |
| HV361_RS07280 () | 1533676..1534659 | + | 984 | WP_001124908.1 | substrate-binding domain-containing protein | - |
| HV361_RS07285 () | 1534682..1536193 | + | 1512 | WP_000493471.1 | sugar ABC transporter ATP-binding protein | - |
| HV361_RS07290 () | 1536218..1537216 | + | 999 | WP_001276670.1 | ABC transporter permease | - |
| HV361_RS07295 () | 1537249..1538343 | + | 1095 | WP_000700800.1 | zinc-binding dehydrogenase | - |
| HV361_RS07300 () | 1538355..1539227 | + | 873 | WP_000158547.1 | aldose 1-epimerase | - |
| HV361_RS07305 () | 1539275..1539697 | - | 423 | WP_001094726.1 | DoxX family protein | - |
| HV361_RS07310 () | 1539794..1540996 | - | 1203 | WP_000660797.1 | phenylpropionate dioxygenase ferredoxin reductase subunit | - |
| HV361_RS07315 () | 1541006..1541818 | - | 813 | WP_001281377.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | - |
| HV361_RS07320 () | 1541815..1542135 | - | 321 | WP_001080102.1 | bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | - |
| HV361_RS07325 () | 1542135..1542653 | - | 519 | WP_001276072.1 | 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | - |
| HV361_RS07330 () | 1542650..1544011 | - | 1362 | WP_000211172.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| HV361_RS07335 () | 1544147..1545037 | + | 891 | WP_000423257.1 | DNA-binding transcriptional regulator HcaR | - |
| HV361_RS07340 () | 1545197..1546336 | + | 1140 | WP_000244193.1 | 3-phenylpropionate MFS transporter | - |
| HV361_RS07345 () | 1546328..1547608 | - | 1281 | WP_000983009.1 | stationary phase inducible protein CsiE | - |
| HV361_RS07350 () | 1547799..1548653 | - | 855 | WP_001299515.1 | alpha/beta hydrolase | - |
| HV361_RS07355 () | 1548798..1549601 | - | 804 | WP_000553451.1 | inositol-1-monophosphatase | - |
| HV361_RS07360 () | 1549720..1550457 | + | 738 | WP_000940018.1 | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | - |
| HV361_RS07365 () | 1550758..1551246 | + | 489 | WP_001241357.1 | Fe-S cluster assembly transcriptional regulator IscR | - |
| HV361_RS07370 () | 1551358..1552572 | + | 1215 | WP_001295373.1 | cysteine desulfurase | - |
| HV361_RS07375 () | 1552600..1552986 | + | 387 | WP_000331707.1 | Fe-S cluster assembly scaffold IscU | - |
| HV361_RS07380 () | 1553003..1553326 | + | 324 | WP_000028953.1 | iron-sulfur cluster assembly protein IscA | - |
| HV361_RS07385 () | 1553422..1553937 | + | 516 | WP_000384411.1 | co-chaperone HscB | - |
| HV361_RS07390 () | 1553954..1555804 | + | 1851 | WP_001196613.1 | Fe-S protein assembly chaperone HscA | - |
| HV361_RS07395 () | 1555806..1556141 | + | 336 | WP_001124474.1 | ISC system 2Fe-2S type ferredoxin | - |
| HV361_RS07400 () | 1556153..1556353 | + | 201 | WP_000523616.1 | Fe-S cluster assembly protein IscX | - |
| HV361_RS07405 () | 1556531..1557814 | + | 1284 | WP_000133579.1 | aminopeptidase PepB | - |
| HV361_RS07410 () | 1557956..1558732 | + | 777 | WP_001326376.1 | enhanced serine sensitivity protein SseB | - |
| HV361_RS07415 () | 1559225..1560070 | - | 846 | WP_000108626.1 | 3-mercaptopyruvate sulfurtransferase | - |
| HV361_RS07420 () | 1560277..1565238 | + | 4962 | WP_000736324.1 | alpha2-macroglobulin | - |
| HV361_RS07425 () | 1565239..1567551 | + | 2313 | WP_038996279.1 | peptidoglycan glycosyltransferase PbpC | - |
| HV361_RS07430 () | 1567700..1568131 | + | 432 | WP_000963837.1 | nucleoside-diphosphate kinase | - |
| HV361_RS07435 () | 1568281..1569435 | + | 1155 | WP_000003317.1 | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | - |
| HV361_RS07440 () | 1569720..1570733 | + | 1014 | WP_001090850.1 | cytoskeleton protein RodZ | - |
| HV361_RS07445 () | 1570760..1571878 | + | 1119 | WP_000551807.1 | flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | - |
| HV361_RS07450 () | 1571989..1573263 | + | 1275 | WP_038996282.1 | histidine--tRNA ligase | - |
| HV361_RS07455 () | 1573281..1573901 | + | 621 | WP_000409205.1 | ancillary SecYEG translocon subunit YfgM | - |
| HV361_RS07460 () | 1573912..1575090 | + | 1179 | WP_001177037.1 | outer membrane protein assembly factor BamB | - |
| HV361_RS07465 () | 1575208..1576680 | + | 1473 | WP_000249410.1 | ribosome biogenesis GTPase Der | - |
| HV361_RS07470 () | 1576749..1576964 | + | 216 | WP_001341622.1 | zinc ribbon domain-containing protein | - |
| HV361_RS07475 () | 1576961..1578331 | - | 1371 | WP_000937933.1 | exodeoxyribonuclease VII large subunit | - |
| HV361_RS07480 () | 1578493..1579959 | + | 1467 | WP_001299507.1 | IMP dehydrogenase | - |
| HV361_RS07485 () | 1580028..1581605 | + | 1578 | WP_000138282.1 | glutamine-hydrolyzing GMP synthase | - |
| HV361_RS07490 () | 1581914..1583122 | + | 1209 | WP_024248387.1 | Prophage integrase IntA ; Integrase | Integrase |
| HV361_RS07495 () | 1583406..1583636 | + | 231 | WP_000410046.1 | AlpA family phage regulatory protein | - |
| HV361_RS07500 () | 1583717..1584775 | + | 1059 | WP_021577798.1 | replication initiator protein A | - |
| HV361_RS07505 () | 1585872..1586198 | - | 327 | WP_027920145.1 | hypothetical protein | - |
| HV361_RS07510 () | 1586201..1587844 | - | 1644 | WP_021241841.1 | P-type conjugative transfer protein TrbL | - |
| HV361_RS07515 () | 1588032..1588823 | - | 792 | WP_000425121.1 | P-type conjugative transfer protein TrbJ | - |
| HV361_RS07520 () | 1589094..1589318 | - | 225 | WP_000844753.1 | hypothetical protein | - |
| HV361_RS07525 () | 1589321..1589530 | - | 210 | WP_000101767.1 | hypothetical protein | - |
| HV361_RS07530 () | 1590004..1590384 | + | 381 | WP_000896705.1 | conjugal transfer protein TraJ | - |
| HV361_RS07535 () | 1590381..1592333 | + | 1953 | WP_041497920.1 | relaxase/mobilization nuclease domain-containing protein | - |
| HV361_RS07540 () | 1592467..1593474 | + | 1008 | WP_029392364.1 | DUF4935 domain-containing protein | - |
| HV361_RS07545 () | 1593660..1594484 | + | 825 | WP_029392366.1 | hypothetical protein | - |
| HV361_RS07550 () | 1594548..1595330 | + | 783 | WP_029392367.1 | hypothetical protein | ARG |
| HV361_RS07555 () | 1595367..1595921 | + | 555 | WP_029392369.1 | AAA family ATPase | - |
| HV361_RS07560 () | 1596064..1596252 | + | 189 | WP_029392370.1 | hypothetical protein | - |
| HV361_RS07565 () | 1596249..1596947 | + | 699 | WP_029392372.1 | hypothetical protein | - |
| HV361_RS07570 () | 1597148..1597687 | - | 540 | WP_000755173.1 | DUF5384 family protein | - |
| HV361_RS07575 () | 1597703..1598221 | - | 519 | WP_001295476.1 | glycine zipper 2TM domain-containing protein | - |
| HV361_RS07580 () | 1598532..1598723 | - | 192 | WP_000076001.1 | DUF2633 family protein | - |
| HV361_RS07585 () | 1598741..1598893 | + | 153 | WP_000017552.1 | hypothetical protein | - |
| HV361_RS07590 () | 1599075..1601318 | + | 2244 | WP_000772732.1 | Cyclic di-GMP phosphodiesterase PdeF | VF |
| HV361_RS07595 () | 1601357..1602898 | - | 1542 | WP_001121363.1 | exopolyphosphatase | - |
| HV361_RS07600 () | 1602903..1604969 | - | 2067 | WP_000529576.1 | polyphosphate kinase 1 | - |
| HV361_RS07605 () | 1605140..1605778 | - | 639 | WP_001028614.1 | phosphoribosylglycinamide formyltransferase | - |
| HV361_RS07610 () | 1605778..1606815 | - | 1038 | WP_001295474.1 | Phosphoribosylformylglycinamidine cyclo-ligase | VF |
| HV361_RS07615 () | 1607140..1607766 | + | 627 | WP_001295473.1 | uracil phosphoribosyltransferase | - |
| HV361_RS07620 () | 1607852..1609141 | + | 1290 | WP_000198328.1 | uracil permease | - |
| HV361_RS07625 () | 1609191..1609937 | + | 747 | WP_000247065.1 | DnaA inactivator Hda | - |
| HV361_RS07630 () | 1610075..1610434 | - | 360 | WP_000166449.1 | arsenate reductase (glutaredoxin) | - |
| HV361_RS07635 () | 1610455..1611918 | - | 1464 | WP_000489667.1 | beta-barrel assembly-enhancing protease | - |
| HV361_RS07640 () | 1612131..1613192 | + | 1062 | WP_000892044.1 | AI-2E family transporter | - |
| HV361_RS07645 () | 1613230..1613454 | - | 225 | WP_001330935.1 | formate/nitrite transporter family protein | - |
| HV361_RS07650 () | 1613346..1614077 | - | 732 | WP_038996291.1 | formate transporter | - |
| HV361_RS07655 () | 1614099..1616111 | - | 2013 | WP_001251502.1 | DNA-binding transcriptional activator HyfR | VF |
| HV361_RS07660 () | 1616141..1616554 | - | 414 | WP_000796789.1 | hydrogenase 4 assembly chaperone HyfJ | - |
| HV361_RS07665 () | 1616547..1617305 | - | 759 | WP_000075542.1 | hydrogenase 4 catalytic subunit HyfI | - |
| HV361_RS07670 () | 1617302..1617847 | - | 546 | WP_000916051.1 | hydrogenase 4 subunit H | - |
| HV361_RS07675 () | 1617857..1619524 | - | 1668 | WP_068858966.1 | hydrogenase 4 catalytic subunit HyfG | - |
| HV361_RS07680 () | 1619514..1621094 | - | 1581 | Protein_1491 | hydrogenase 4 subunit F | - |
| HV361_RS07685 () | 1621099..1621749 | - | 651 | WP_000147984.1 | hydrogenase 4 membrane subunit | - |
| HV361_RS07690 () | 1621761..1623113 | - | 1353 | WP_001345762.1 | hydrogenase 4 subunit HyfD | - |
| HV361_RS22385 () | 1623089..1623199 | - | 111 | WP_000429114.1 | hypothetical protein | - |
| HV361_RS07700 () | 1623216..1624163 | - | 948 | WP_001345763.1 | hydrogenase 4 subunit HyfC | - |
| HV361_RS07705 () | 1624174..1626191 | - | 2018 | Protein_1496 | hydrogenase 4 subunit B | - |
| HV361_RS07710 () | 1626191..1626808 | - | 618 | WP_001345766.1 | hydrogenase 4 subunit HyfA | - |
| HV361_RS07715 () | 1627061..1627531 | - | 471 | WP_001068682.1 | thioredoxin-dependent thiol peroxidase | - |
| HV361_RS07720 () | 1627531..1628103 | - | 573 | WP_000176187.1 | glycine cleavage system transcriptional repressor | - |
| HV361_RS07725 () | 1628249..1629127 | + | 879 | WP_001345767.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| HV361_RS07730 () | 1629144..1630178 | + | 1035 | WP_001297320.1 | outer membrane protein assembly factor BamC | - |
| HV361_RS07735 () | 1630391..1631104 | + | 714 | WP_001295467.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| HV361_RS07740 () | 1631259..1631486 | + | 228 | WP_000450524.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| HV361_RS07745 () | 1631486..1631884 | + | 399 | WP_000911330.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HV361_RS07750 () | 1632031..1632894 | + | 864 | WP_001267498.1 | neutral zinc metallopeptidase | - |
| HV361_RS07755 () | 1632909..1634925 | + | 2017 | Protein_1506 | tRNA cytosine(34) acetyltransferase TmcA | - |
| HV361_RS07760 () | 1634999..1635697 | + | 699 | WP_000679812.1 | esterase | - |
| HV361_RS07765 () | 1635807..1636007 | - | 201 | WP_000383836.1 | YpfN family protein | - |
| HV361_RS07770 () | 1636035..1637162 | - | 1128 | WP_001277801.1 | succinyl-diaminopimelate desuccinylase | - |
| HV361_RS07775 () | 1637166..1637522 | - | 357 | WP_000258247.1 | ArsC family reductase | - |
| HV361_RS07780 () | 1637903..1637962 | + | 60 | WP_001386977.1 | protein YpfM | - |
| HV361_RS07785 () | 1638061..1641174 | - | 3114 | WP_001273136.1 | Multidrug efflux pump subunit AcrB | VF |
| HV361_RS07790 () | 1641338..1643038 | - | 1701 | WP_000636129.1 | nitrate/nitrite two-component system sensor histidine kinase NarQ | - |
| HV361_RS07795 () | 1643244..1645223 | + | 1980 | WP_001078870.1 | formate-dependent uric acid utilization protein AegA | - |
| HV361_RS07800 () | 1645291..1645866 | + | 576 | WP_001299058.1 | GDP-mannose pyrophosphatase NudK | - |
| HV361_RS07805 () | 1645992..1647035 | + | 1044 | WP_001270524.1 | DUF1176 domain-containing protein | - |
| HV361_RS07810 () | 1647131..1649134 | - | 2004 | WP_038996302.1 | transketolase | - |
| HV361_RS07815 () | 1649154..1650104 | - | 951 | WP_001003709.1 | transaldolase | - |
| HV361_RS07820 () | 1650393..1652672 | + | 2280 | WP_000342642.1 | NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase | - |
| HV361_RS07825 () | 1652965..1653300 | + | 336 | WP_000356956.1 | ethanolamine utilization microcompartment protein EutS | - |
| HV361_RS07830 () | 1653313..1653792 | + | 480 | WP_000820764.1 | ethanolamine utilization acetate kinase EutP | - |
| HV361_RS07835 () | 1653767..1654468 | + | 702 | WP_175055360.1 | ethanolamine utilization acetate kinase EutQ | - |
| HV361_RS07840 () | 1654465..1655268 | + | 804 | WP_000651298.1 | ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT | - |
| HV361_RS07845 () | 1655265..1656281 | + | 1017 | WP_000582977.1 | phosphate acetyltransferase | - |
| HV361_RS07850 () | 1656320..1656613 | + | 294 | WP_000387713.1 | ethanolamine utilization microcompartment protein EutM | - |
| HV361_RS07855 () | 1656720..1657007 | + | 288 | WP_000762196.1 | ethanolamine utilization microcompartment protein EutN | - |
| HV361_RS07860 () | 1657019..1658422 | + | 1404 | WP_001075711.1 | Gamma-glutamyl phosphate reductase | VF |
| HV361_RS07865 () | 1658433..1659269 | + | 837 | WP_000929726.1 | ethanolamine utilization protein EutJ | - |
| HV361_RS07870 () | 1659259..1660446 | + | 1188 | WP_001297322.1 | ethanolamine utilization ethanol dehydrogenase EutG | - |
| HV361_RS07875 () | 1660563..1661789 | + | 1227 | WP_000512372.1 | ethanolamine utilization protein EutH | - |
| HV361_RS07880 () | 1661786..1663189 | + | 1404 | WP_001471952.1 | ethanolamine ammonia-lyase reactivating factor EutA | - |
| HV361_RS07885 () | 1663201..1664562 | + | 1362 | WP_000769961.1 | ethanolamine ammonia-lyase subunit alpha | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|