MGE detailed information
MGE type: Prophage MGE length: 8605 bp
Accession: NZ_LR778152 Location: 3797667..3806271 Organism: Escherichia coli isolate SC477 Replicon: chromosome
Accession: NZ_LR778152 Location: 3797667..3806271 Organism: Escherichia coli isolate SC477 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1D09_RS18315 () | 3793489..3794592 | + | 1104 | WP_001021994.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| H1D09_RS18320 () | 3794780..3795163 | - | 384 | WP_000778795.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| H1D09_RS18325 () | 3795587..3796696 | + | 1110 | WP_001316697.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| H1D09_RS18330 () | 3796744..3797670 | + | 927 | WP_001295097.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| H1D09_RS18335 () | 3797667..3798944 | + | 1278 | WP_000803817.1 | branched chain amino acid ABC transporter permease LivM | - |
| H1D09_RS18340 () | 3798941..3799708 | + | 768 | WP_033811128.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| H1D09_RS18345 () | 3799710..3800423 | + | 714 | WP_000416895.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| H1D09_RS18350 () | 3800511..3800732 | + | 222 | WP_000557315.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| H1D09_RS18355 () | 3800729..3801106 | + | 378 | WP_175058671.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| H1D09_RS18360 () | 3801315..3802631 | + | 1317 | WP_021531661.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| H1D09_RS18365 () | 3802729..3803617 | + | 889 | Protein_3583 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| H1D09_RS18370 () | 3803614..3804459 | + | 846 | WP_000572183.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| H1D09_RS18375 () | 3804461..3805531 | + | 1071 | WP_000907824.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| H1D09_RS18380 () | 3805528..3806271 | + | 744 | WP_000073619.1 | glycerophosphodiester phosphodiesterase | - |
| H1D09_RS18385 () | 3806258..3806698 | - | 441 | WP_000826132.1 | DUF2756 family protein | - |
| H1D09_RS18390 () | 3806818..3808551 | + | 1734 | WP_096939184.1 | gamma-glutamyltransferase | - |
| H1D09_RS18395 () | 3808612..3809100 | - | 489 | WP_001442056.1 | N-acetyltransferase | - |
| H1D09_RS18400 () | 3809434..3810471 | + | 1038 | WP_000236276.1 | oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|