MGE detailed information
MGE type: Prophage MGE length: 47212 bp
Accession: NZ_LR778151 Location: 1398333..1445544 Organism: Escherichia coli isolate SC476 Replicon: chromosome
Accession: NZ_LR778151 Location: 1398333..1445544 Organism: Escherichia coli isolate SC476 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1C97_RS06615 () | 1394846..1395592 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| H1C97_RS06620 () | 1395681..1396367 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| H1C97_RS06625 () | 1396545..1396748 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| H1C97_RS06630 () | 1396784..1398244 | - | 1461 | WP_000527753.1 | mannitol dehydrogenase family protein | - |
| H1C97_RS06635 () | 1398333..1399616 | - | 1284 | Protein_1289 | MHS family MFS transporter YdfJ | - |
| H1C97_RS06640 () | 1400220..1400333 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| H1C97_RS06645 () | 1400402..1400635 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| H1C97_RS06650 () | 1400952..1401542 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| H1C97_RS06655 () | 1401640..1402215 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| H1C97_RS06660 () | 1402215..1405289 | - | 3075 | WP_016230955.1 | phage tail protein | - |
| H1C97_RS06665 () | 1405354..1405953 | - | 600 | WP_001233090.1 | Outer membrane protein X | VF |
| H1C97_RS06670 () | 1406024..1409521 | - | 3498 | WP_000515713.1 | host specificity protein J | - |
| H1C97_RS06675 () | 1409582..1410214 | - | 633 | WP_000090895.1 | tail assembly protein | - |
| H1C97_RS06680 () | 1410151..1410894 | - | 744 | WP_000194783.1 | C40 family peptidase | - |
| H1C97_RS06685 () | 1410900..1411598 | - | 699 | WP_001152639.1 | phage minor tail protein L | - |
| H1C97_RS06690 () | 1411598..1411927 | - | 330 | WP_000847379.1 | phage tail protein | - |
| H1C97_RS06695 () | 1411924..1414485 | - | 2562 | WP_112029037.1 | phage tail tape measure protein | - |
| H1C97_RS06700 () | 1414478..1414912 | - | 435 | WP_112029036.1 | phage tail assembly protein T | - |
| H1C97_RS06705 () | 1414894..1415316 | - | 423 | WP_000479150.1 | phage minor tail protein G | - |
| H1C97_RS06710 () | 1415332..1416072 | - | 741 | WP_001564531.1 | phage tail protein | - |
| H1C97_RS06715 () | 1416080..1416475 | - | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| H1C97_RS06720 () | 1416472..1417050 | - | 579 | WP_000985116.1 | phage tail protein | - |
| H1C97_RS06725 () | 1417062..1417415 | - | 354 | WP_000752986.1 | head-tail joining protein | - |
| H1C97_RS06730 () | 1417427..1417822 | - | 396 | WP_000158868.1 | DNA-packaging protein FI | - |
| H1C97_RS06735 () | 1417864..1418889 | - | 1026 | WP_000063217.1 | major capsid protein | - |
| H1C97_RS06740 () | 1418945..1419277 | - | 333 | WP_001513196.1 | head decoration protein | - |
| H1C97_RS06745 () | 1419287..1420606 | - | 1320 | WP_063267455.1 | S49 family peptidase | - |
| H1C97_RS06750 () | 1420587..1422188 | - | 1602 | WP_016235295.1 | phage portal protein | - |
| H1C97_RS06755 () | 1422185..1422391 | - | 207 | WP_000198149.1 | gpW family protein | - |
| H1C97_RS06760 () | 1422388..1424313 | - | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| H1C97_RS06765 () | 1424288..1424833 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| H1C97_RS06770 () | 1425222..1425455 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| H1C97_RS06775 () | 1425513..1425923 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| H1C97_RS06780 () | 1426075..1426248 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| H1C97_RS06785 () | 1426420..1426575 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| H1C97_RS06790 () | 1426655..1426720 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| H1C97_RS06795 () | 1426723..1426911 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| H1C97_RS06800 () | 1426922..1427134 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| H1C97_RS06805 () | 1427497..1427994 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| H1C97_RS06810 () | 1427991..1428524 | - | 534 | WP_001092971.1 | lysozyme | - |
| H1C97_RS06815 () | 1428521..1428832 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| H1C97_RS06820 () | 1428837..1429052 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| H1C97_RS06825 () | 1429806..1430021 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| H1C97_RS06830 () | 1430322..1430534 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| H1C97_RS06835 () | 1430589..1430678 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| H1C97_RS06840 () | 1430956..1431708 | - | 753 | WP_001047135.1 | antitermination protein | - |
| H1C97_RS06845 () | 1431722..1432771 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| H1C97_RS06850 () | 1432773..1433051 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| H1C97_RS06855 () | 1433118..1433369 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| H1C97_RS06860 () | 1433586..1433741 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| H1C97_RS06865 () | 1433813..1434100 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| H1C97_RS06870 () | 1434100..1434339 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| H1C97_RS06875 () | 1434364..1434669 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| H1C97_RS06880 () | 1434872..1435204 | + | 333 | WP_001301033.1 | protein FlxA | - |
| H1C97_RS06885 () | 1435641..1436981 | - | 1341 | WP_000589012.1 | ISNCY family transposase ISCARN112 | Transposase |
| H1C97_RS06890 () | 1437015..1437434 | - | 420 | WP_001151195.1 | DUF977 family protein | - |
| H1C97_RS06895 () | 1437475..1438440 | - | 966 | WP_000054504.1 | hypothetical protein | - |
| H1C97_RS06900 () | 1438421..1438942 | - | 522 | WP_000705349.1 | hypothetical protein | - |
| H1C97_RS06905 () | 1438926..1439153 | - | 228 | WP_000476993.1 | transcriptional regulator | - |
| H1C97_RS06910 () | 1439231..1439638 | + | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| H1C97_RS06915 () | 1439831..1439986 | + | 156 | WP_000379589.1 | DUF1391 family protein | - |
| H1C97_RS06920 () | 1439988..1440239 | + | 252 | WP_122986852.1 | hypothetical protein | - |
| H1C97_RS06925 () | 1440226..1440546 | - | 321 | WP_122986851.1 | hypothetical protein | - |
| H1C97_RS06930 () | 1441051..1441239 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| H1C97_RS06935 () | 1441236..1441427 | + | 192 | WP_001083280.1 | lysis protein YdfD | - |
| H1C97_RS06940 () | 1441521..1443992 | + | 2472 | WP_033815598.1 | exonuclease | - |
| H1C97_RS06945 () | 1444065..1444316 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| H1C97_RS06950 () | 1444351..1445632 | + | 1282 | Protein_1352 | IS91 family transposase ISTha3 | Transposase |
| H1C97_RS06955 () | 1445652..1445762 | - | 111 | WP_021531328.1 | hypothetical protein | - |
| H1C97_RS06960 () | 1445820..1446839 | - | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| H1C97_RS06965 () | 1446851..1448065 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| H1C97_RS06970 () | 1448271..1448597 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| H1C97_RS06975 () | 1448732..1449073 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| H1C97_RS06980 () | 1449108..1449669 | + | 562 | Protein_1358 | spermidine N1-acetyltransferase | - |
| H1C97_RS06985 () | 1449672..1450382 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|