MGE detailed information
MGE type: Genomic_island MGE length: 8137 bp
Accession: NZ_LR778149 Location: 3362616..3370752 Organism: Escherichia coli isolate SC487 Replicon: chromosome
Accession: NZ_LR778149 Location: 3362616..3370752 Organism: Escherichia coli isolate SC487 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1C96_RS16040 () | 3357794..3358996 | + | 1203 | WP_000439180.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| H1C96_RS16045 () | 3359312..3360364 | - | 1053 | WP_001028905.1 | DUF2776 domain-containing protein | - |
| H1C96_RS16050 () | 3360747..3362354 | + | 1608 | WP_180344490.1 | DUF4049 domain-containing protein | - |
| H1C96_RS16055 () | 3362616..3364238 | + | 1623 | WP_001439236.1 | DUF4049 domain-containing protein | - |
| H1C96_RS16060 () | 3364604..3365671 | + | 1068 | WP_000361467.1 | HlyD family secretion protein | - |
| H1C96_RS16065 () | 3365668..3368403 | + | 2736 | WP_000149124.1 | Ribosome-associated ATPase | VF |
| H1C96_RS16070 () | 3368403..3369527 | + | 1125 | WP_001216257.1 | ABC transporter permease | - |
| H1C96_RS16075 () | 3369600..3369875 | + | 276 | WP_001259388.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| H1C96_RS16080 () | 3369872..3370231 | + | 360 | WP_000593555.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| H1C96_RS16085 () | 3370351..3370752 | - | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| H1C96_RS16090 () | 3370758..3371564 | - | 807 | WP_000173666.1 | nickel import ATP-binding protein NikE | - |
| H1C96_RS16095 () | 3371561..3372325 | - | 765 | WP_001136236.1 | nickel import ATP-binding protein NikD | - |
| H1C96_RS16100 () | 3372325..3373158 | - | 834 | WP_001008963.1 | nickel ABC transporter permease subunit NikC | - |
| H1C96_RS16105 () | 3373155..3374099 | - | 945 | WP_000947068.1 | nickel ABC transporter permease subunit NikB | - |
| H1C96_RS16110 () | 3374099..3375673 | - | 1575 | WP_000953356.1 | nickel ABC transporter substrate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|