MGE detailed information
MGE type: Prophage MGE length: 55161 bp
Accession: NZ_LR778148 Location: 3604816..3659976 Organism: Escherichia coli isolate SC475 Replicon: chromosome
Accession: NZ_LR778148 Location: 3604816..3659976 Organism: Escherichia coli isolate SC475 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1C74_RS17120 () | 3600206..3600904 | + | 699 | WP_000577184.1 | GntR family transcriptional regulator | - |
| H1C74_RS17125 () | 3600949..3601848 | - | 900 | WP_000087216.1 | O-acetylserine/cysteine exporter | - |
| H1C74_RS17130 () | 3602043..3603230 | + | 1188 | WP_001054189.1 | efflux MFS transporter YdeE | - |
| H1C74_RS17135 () | 3603357..3603452 | + | 96 | WP_000901367.1 | protein MgtS | - |
| H1C74_RS17140 () | 3603671..3604561 | - | 891 | WP_000592827.1 | diguanylate cyclase DgcZ | - |
| H1C74_RS17145 () | 3604816..3605208 | - | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| H1C74_RS17150 () | 3605484..3606002 | + | 519 | WP_001024561.1 | 2-oxo-tetronate isomerase | - |
| H1C74_RS17155 () | 3606047..3608092 | - | 2046 | WP_001295662.1 | peptidyl-dipeptidase Dcp | - |
| H1C74_RS17160 () | 3608229..3608975 | + | 747 | WP_000636575.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| H1C74_RS17165 () | 3609064..3609750 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| H1C74_RS17170 () | 3609928..3610131 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| H1C74_RS17175 () | 3610167..3611627 | - | 1461 | WP_000527751.1 | mannitol dehydrogenase family protein | - |
| H1C74_RS17180 () | 3611716..3612999 | - | 1284 | Protein_3343 | MHS family MFS transporter YdfJ | - |
| H1C74_RS17185 () | 3613602..3613715 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| H1C74_RS17190 () | 3613784..3614017 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| H1C74_RS17195 () | 3614334..3614924 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| H1C74_RS17200 () | 3615022..3615597 | - | 576 | WP_001296766.1 | tail fiber assembly protein | - |
| H1C74_RS17205 () | 3615597..3618512 | - | 2916 | WP_074431257.1 | prophage tail fiber N-terminal domain-containing protein | - |
| H1C74_RS17210 () | 3618577..3619176 | - | 600 | WP_044311276.1 | Outer membrane protein X | VF |
| H1C74_RS17215 () | 3619243..3622641 | - | 3399 | WP_000515573.1 | host specificity protein J | - |
| H1C74_RS17220 () | 3622702..3623349 | - | 648 | WP_001309913.1 | tail assembly protein | - |
| H1C74_RS17225 () | 3623247..3623990 | - | 744 | WP_000140729.1 | C40 family peptidase | - |
| H1C74_RS17230 () | 3623996..3624694 | - | 699 | WP_001152385.1 | phage minor tail protein L | - |
| H1C74_RS17235 () | 3624704..3625033 | - | 330 | WP_000447248.1 | phage tail protein | - |
| H1C74_RS17240 () | 3625033..3628098 | - | 3066 | WP_000372010.1 | phage tail tape measure protein | - |
| H1C74_RS17245 () | 3628070..3628399 | - | 330 | WP_021526333.1 | phage tail assembly protein T | - |
| H1C74_RS17250 () | 3628408..3628794 | - | 387 | WP_001297778.1 | phage minor tail protein G | - |
| H1C74_RS17255 () | 3628855..3629598 | - | 744 | WP_000211109.1 | phage tail protein | - |
| H1C74_RS17260 () | 3629610..3630011 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| H1C74_RS17265 () | 3630008..3630586 | - | 579 | WP_000677108.1 | phage tail protein | - |
| H1C74_RS17270 () | 3630598..3630873 | - | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| H1C74_RS17275 () | 3630866..3631189 | - | 324 | WP_001097050.1 | DUF2190 family protein | - |
| H1C74_RS17280 () | 3631276..3633303 | - | 2028 | WP_001136587.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| H1C74_RS17285 () | 3633248..3634828 | - | 1581 | WP_011478361.1 | phage portal protein | - |
| H1C74_RS17290 () | 3634756..3634968 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| H1C74_RS17295 () | 3634965..3637067 | - | 2103 | WP_047083333.1 | phage terminase large subunit family protein | - |
| H1C74_RS17300 () | 3637067..3637561 | - | 495 | WP_000373425.1 | DUF1441 family protein | - |
| H1C74_RS17305 () | 3638124..3638330 | - | 207 | WP_001031433.1 | hypothetical protein | - |
| H1C74_RS17310 () | 3638631..3639062 | + | 432 | WP_000035576.1 | DUF1398 domain-containing protein | - |
| H1C74_RS17315 () | 3639214..3639387 | - | 174 | WP_001019139.1 | addiction module toxin, GnsA/GnsB family | - |
| H1C74_RS17320 () | 3639559..3639714 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| H1C74_RS17325 () | 3639794..3639859 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| H1C74_RS17330 () | 3639862..3640050 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| H1C74_RS17335 () | 3640061..3640273 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| H1C74_RS17340 () | 3640636..3641133 | - | 498 | WP_047083332.1 | DUF2514 domain-containing protein | - |
| H1C74_RS17345 () | 3641130..3641663 | - | 534 | WP_001092971.1 | lysozyme | - |
| H1C74_RS17350 () | 3641660..3641971 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| H1C74_RS17355 () | 3641976..3642191 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| H1C74_RS17360 () | 3642945..3643160 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| H1C74_RS17365 () | 3643461..3643673 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| H1C74_RS17370 () | 3643728..3643817 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| H1C74_RS17375 () | 3644095..3644847 | - | 753 | WP_001047135.1 | antitermination protein | - |
| H1C74_RS17380 () | 3644861..3645910 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| H1C74_RS17385 () | 3645912..3646190 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| H1C74_RS17390 () | 3646257..3646508 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| H1C74_RS17395 () | 3646725..3646880 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| H1C74_RS17400 () | 3646952..3647239 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| H1C74_RS17405 () | 3647239..3647478 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| H1C74_RS17410 () | 3647503..3647808 | + | 306 | WP_071527819.1 | hypothetical protein | - |
| H1C74_RS17415 () | 3648011..3648343 | + | 333 | WP_001317460.1 | FlxA-like family protein | - |
| H1C74_RS17420 () | 3648780..3650120 | - | 1341 | WP_042054313.1 | ISNCY family transposase ISCARN112 | Transposase |
| H1C74_RS17425 () | 3650154..3650573 | - | 420 | WP_001151196.1 | DUF977 family protein | - |
| H1C74_RS17430 () | 3650614..3651579 | - | 966 | WP_000054504.1 | hypothetical protein | - |
| H1C74_RS17435 () | 3651560..3652081 | - | 522 | WP_000705349.1 | hypothetical protein | - |
| H1C74_RS17440 () | 3652065..3652292 | - | 228 | WP_000476993.1 | transcriptional regulator | - |
| H1C74_RS17445 () | 3652370..3652777 | + | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| H1C74_RS17450 () | 3652970..3653125 | + | 156 | WP_000379589.1 | DUF1391 family protein | - |
| H1C74_RS17455 () | 3653127..3653702 | + | 576 | WP_000344954.1 | hypothetical protein | - |
| H1C74_RS17460 () | 3654189..3654377 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| H1C74_RS17465 () | 3654374..3654565 | + | 192 | WP_001083280.1 | lysis protein YdfD | - |
| H1C74_RS17470 () | 3654659..3657130 | + | 2472 | WP_000048330.1 | exonuclease | - |
| H1C74_RS17475 () | 3657203..3657454 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| H1C74_RS17480 () | 3657489..3658769 | + | 1281 | WP_000876986.1 | Putative defective protein IntQ ; Integrase | Integrase |
| H1C74_RS17485 () | 3658771..3658899 | - | 129 | WP_001389342.1 | hypothetical protein | - |
| H1C74_RS17490 () | 3658957..3659976 | - | 1020 | WP_000836057.1 | Zn-dependent oxidoreductase | - |
| H1C74_RS17495 () | 3659988..3661202 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| H1C74_RS17500 () | 3661408..3661734 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| H1C74_RS17505 () | 3661869..3662210 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| H1C74_RS17510 () | 3662245..3662805 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| H1C74_RS17515 () | 3662808..3663518 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| H1C74_RS17520 () | 3663626..3663931 | + | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|