MGE detailed information
MGE type: Genomic_island MGE length: 71696 bp
Accession: NZ_LR778147 Location: 4508309..4580004 Organism: Escherichia coli isolate SC418 Replicon: chromosome
Accession: NZ_LR778147 Location: 4508309..4580004 Organism: Escherichia coli isolate SC418 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1D11_RS21445 () | 4503466..4504053 | + | 588 | WP_001558657.1 | transcriptional regulator BetI | - |
| H1D11_RS21450 () | 4504067..4505539 | + | 1473 | WP_115423894.1 | betaine-aldehyde dehydrogenase | - |
| H1D11_RS21455 () | 4505553..4507241 | + | 1689 | WP_115423895.1 | choline dehydrogenase | - |
| H1D11_RS21460 () | 4508309..4508872 | + | 564 | WP_001295805.1 | ISKra4 family transposase ISCep1 | VF |
| H1D11_RS21465 () | 4509202..4509996 | + | 795 | WP_115423896.1 | LuxR family transcriptional regulator HyxR | - |
| H1D11_RS21470 () | 4510150..4510911 | + | 762 | WP_115423897.1 | protein HyxA | - |
| H1D11_RS21475 () | 4510953..4511978 | + | 1026 | Protein_4188 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| H1D11_RS21480 () | 4512240..4513433 | + | 1194 | WP_088144553.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| H1D11_RS21485 () | 4513615..4514283 | + | 669 | WP_115423898.1 | hypothetical protein | - |
| H1D11_RS21490 () | 4514524..4515219 | - | 696 | WP_115423900.1 | lactate utilization protein C | - |
| H1D11_RS21495 () | 4515212..4516639 | - | 1428 | WP_001558648.1 | iron-sulfur cluster-binding protein | - |
| H1D11_RS21500 () | 4516650..4517369 | - | 720 | WP_001102115.1 | (Fe-S)-binding protein | - |
| H1D11_RS21505 () | 4517888..4518742 | - | 855 | WP_000339603.1 | DNA-binding transcriptional regulator RclR | - |
| H1D11_RS21510 () | 4518969..4520294 | + | 1326 | WP_001046306.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| H1D11_RS21515 () | 4520403..4520639 | + | 237 | WP_000474077.1 | DUF1471 domain-containing protein | - |
| H1D11_RS21520 () | 4520651..4521244 | + | 594 | WP_001306921.1 | reactive chlorine species resistance protein RclC | - |
| H1D11_RS21525 () | 4521404..4522273 | - | 870 | WP_048970461.1 | aldo/keto reductase | - |
| H1D11_RS21530 () | 4522521..4523378 | + | 858 | WP_001389970.1 | Right origin-binding protein | VF |
| H1D11_RS21535 () | 4523499..4527752 | - | 4254 | WP_115423901.1 | hypothetical protein | VF |
| H1D11_RS21540 () | 4528318..4529169 | + | 852 | WP_115423902.1 | aldo/keto reductase | - |
| H1D11_RS21545 () | 4529196..4530185 | + | 990 | WP_001172288.1 | aldo/keto reductase | - |
| H1D11_RS21550 () | 4530216..4531109 | - | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| H1D11_RS21555 () | 4531309..4532235 | - | 927 | WP_001328123.1 | HTH-type transcriptional regulator PgrR | VF |
| H1D11_RS21560 () | 4532392..4533312 | + | 921 | WP_115423903.1 | alpha/beta hydrolase | - |
| H1D11_RS21565 () | 4533557..4534699 | + | 1143 | WP_115423904.1 | NADH-dependent flavin oxidoreductase | - |
| H1D11_RS21570 () | 4535172..4535273 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| H1D11_RS21575 () | 4535639..4535902 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| H1D11_RS21580 () | 4535902..4536042 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| H1D11_RS21585 () | 4536112..4536302 | - | 191 | Protein_4210 | hypothetical protein | - |
| H1D11_RS21590 () | 4537126..4537668 | + | 543 | WP_001305433.1 | HTH-type transcriptional regulator EcpR | VF |
| H1D11_RS21595 () | 4537743..4538330 | + | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| H1D11_RS21600 () | 4538388..4539056 | + | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| H1D11_RS21605 () | 4539082..4541607 | + | 2526 | WP_001131068.1 | putative outer membrane usher protein EcpC | VF |
| H1D11_RS21610 () | 4541597..4543240 | + | 1644 | WP_001265664.1 | Fimbria adhesin EcpD | VF |
| H1D11_RS21615 () | 4543209..4543919 | + | 711 | WP_115423905.1 | putative fimbrial chaperone EcpE | VF |
| H1D11_RS21620 () | 4544232..4544561 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| H1D11_RS21625 () | 4544810..4545424 | - | 615 | WP_001019920.1 | YagU family protein | - |
| H1D11_RS21630 () | 4545830..4546519 | + | 690 | WP_096251666.1 | aldehyde dehydrogenase iron-sulfur subunit | - |
| H1D11_RS21635 () | 4546516..4547472 | + | 957 | WP_001577786.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| H1D11_RS21640 () | 4547469..4549667 | + | 2199 | WP_115423906.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| H1D11_RS21645 () | 4549677..4550630 | + | 954 | WP_115423907.1 | molybdenum cofactor insertion chaperone PaoD | - |
| H1D11_RS21650 () | 4550809..4551936 | - | 1128 | WP_143365328.1 | MFS transporter | - |
| H1D11_RS21655 () | 4552078..4553136 | - | 1059 | WP_023307639.1 | alpha/beta hydrolase | - |
| H1D11_RS21660 () | 4553401..4554285 | + | 885 | WP_001119037.1 | HTH-type transcriptional regulator PgrR | VF |
| H1D11_RS21665 () | 4554855..4555085 | + | 231 | Protein_4226 | LysR family transcriptional regulator | - |
| H1D11_RS21670 () | 4555572..4556906 | - | 1335 | WP_115423911.1 | PLP-dependent aminotransferase family protein | - |
| H1D11_RS21675 () | 4557006..4557893 | + | 888 | WP_001560838.1 | DMT family transporter | - |
| H1D11_RS21680 () | 4558904..4562446 | + | 3543 | WP_115423912.1 | hypothetical protein | - |
| H1D11_RS21685 () | 4562806..4563390 | - | 585 | WP_115423913.1 | tail fiber assembly protein | - |
| H1D11_RS21690 () | 4563390..4566476 | - | 3087 | Protein_4231 | prophage tail fiber N-terminal domain-containing protein | - |
| H1D11_RS21695 () | 4566487..4567665 | - | 1179 | Protein_4232 | IS3-like element ISEc31 family transposase | - |
| H1D11_RS21700 () | 4567720..4568019 | + | 300 | WP_115423805.1 | HD family hydrolase | - |
| H1D11_RS21705 () | 4568010..4568372 | + | 363 | WP_115355881.1 | hypothetical protein | - |
| H1D11_RS21710 () | 4568372..4568677 | + | 306 | WP_000206732.1 | hypothetical protein | - |
| H1D11_RS21715 () | 4568904..4570067 | + | 1164 | WP_143365311.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| H1D11_RS21725 () | 4570271..4571524 | - | 1254 | WP_096931140.1 | glutamate-5-semialdehyde dehydrogenase | - |
| H1D11_RS21730 () | 4571536..4572639 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| H1D11_RS21735 () | 4572927..4573982 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| H1D11_RS21740 () | 4574021..4574422 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| H1D11_RS21745 () | 4574480..4575724 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 4575140..4575220 | - | 81 | NuclAT_11 | - | - |
| - () | 4575140..4575220 | - | 81 | NuclAT_11 | - | - |
| - () | 4575140..4575220 | - | 81 | NuclAT_11 | - | - |
| - () | 4575140..4575220 | - | 81 | NuclAT_11 | - | - |
| H1D11_RS21750 () | 4575816..4576274 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| H1D11_RS21755 () | 4576535..4577992 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| H1D11_RS24750 () | 4578049..4578401 | - | 353 | Protein_4244 | peptide chain release factor H | - |
| H1D11_RS21765 () | 4578397..4578603 | - | 207 | Protein_4245 | RtcB family protein | - |
| H1D11_RS21770 () | 4578848..4579300 | - | 453 | WP_001059899.1 | GNAT family N-acetyltransferase | - |
| H1D11_RS21775 () | 4579310..4579708 | - | 399 | WP_001521903.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| H1D11_RS21780 () | 4579711..4580004 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| H1D11_RS21785 () | 4580056..4581111 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| H1D11_RS21790 () | 4581182..4581967 | - | 786 | WP_000207556.1 | putative lateral flagellar export/assembly protein LafU | - |
| H1D11_RS21795 () | 4581939..4583651 | + | 1713 | Protein_4251 | flagellar biosynthesis protein FlhA | - |
| H1D11_RS21800 () | 4583749..4584498 | - | 750 | WP_000093946.1 | C40 family peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|