MGE detailed information
MGE type: Genomic_island MGE length: 11289 bp
Accession: NZ_LR778147 Location: 1143552..1154840 Organism: Escherichia coli isolate SC418 Replicon: chromosome
Accession: NZ_LR778147 Location: 1143552..1154840 Organism: Escherichia coli isolate SC418 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1D11_RS05255 () | 1138553..1138987 | - | 435 | WP_000948818.1 | PTS sugar transporter subunit IIA | - |
| H1D11_RS05260 () | 1139005..1139883 | - | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| H1D11_RS05265 () | 1139873..1140652 | - | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| H1D11_RS05270 () | 1140663..1141136 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| H1D11_RS05275 () | 1141159..1142439 | - | 1281 | WP_032352643.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| H1D11_RS05280 () | 1142688..1143497 | + | 810 | WP_096131879.1 | aga operon transcriptional regulator AgaR | - |
| H1D11_RS05285 () | 1143552..1144016 | - | 465 | WP_032352641.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| H1D11_RS05290 () | 1144016..1144351 | - | 336 | WP_032352640.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| H1D11_RS05295 () | 1144500..1146071 | - | 1572 | WP_001273756.1 | galactarate dehydratase | - |
| H1D11_RS05300 () | 1146446..1147780 | + | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| H1D11_RS05305 () | 1147796..1148566 | + | 771 | WP_001551692.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| H1D11_RS05310 () | 1148596..1149486 | + | 891 | WP_001306012.1 | 2-hydroxy-3-oxopropionate reductase | - |
| H1D11_RS05315 () | 1149583..1150728 | + | 1146 | WP_001521378.1 | glycerate 2-kinase | - |
| H1D11_RS05325 () | 1151365..1152552 | - | 1188 | WP_115423966.1 | YhaC family protein | - |
| H1D11_RS05330 () | 1152574..1153113 | - | 540 | WP_000675750.1 | hypothetical protein | - |
| H1D11_RS05335 () | 1153369..1153713 | - | 345 | WP_019842330.1 | transcriptional activator TdcR | - |
| H1D11_RS05340 () | 1153902..1154840 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| H1D11_RS05345 () | 1154939..1155928 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| H1D11_RS05350 () | 1155950..1157281 | + | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| H1D11_RS05355 () | 1157307..1158515 | + | 1209 | WP_001308968.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|