MGE detailed information
MGE type: Prophage MGE length: 8604 bp
Accession: NZ_LR778146 Location: 3794394..3802997 Organism: Escherichia coli isolate SC455 Replicon: chromosome
Accession: NZ_LR778146 Location: 3794394..3802997 Organism: Escherichia coli isolate SC455 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1D08_RS18310 () | 3790216..3791319 | + | 1104 | WP_001021994.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| H1D08_RS18315 () | 3791507..3791890 | - | 384 | WP_000778795.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| H1D08_RS18320 () | 3792314..3793423 | + | 1110 | WP_001316697.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| H1D08_RS18325 () | 3793471..3794397 | + | 927 | WP_001295097.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| H1D08_RS18330 () | 3794394..3795671 | + | 1278 | WP_000803817.1 | branched chain amino acid ABC transporter permease LivM | - |
| H1D08_RS18335 () | 3795668..3796435 | + | 768 | WP_033811128.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| H1D08_RS18340 () | 3796437..3797150 | + | 714 | WP_000416895.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| H1D08_RS18345 () | 3797238..3797459 | + | 222 | WP_000557315.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| H1D08_RS18350 () | 3797456..3797833 | + | 378 | WP_175058671.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| H1D08_RS18355 () | 3798042..3799358 | + | 1317 | WP_021531661.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| H1D08_RS18360 () | 3799456..3800343 | + | 888 | WP_000099282.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| H1D08_RS18365 () | 3800340..3801185 | + | 846 | WP_000572183.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| H1D08_RS18370 () | 3801187..3802257 | + | 1071 | WP_000907824.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| H1D08_RS18375 () | 3802254..3802997 | + | 744 | WP_000073619.1 | glycerophosphodiester phosphodiesterase | - |
| H1D08_RS18380 () | 3802984..3803424 | - | 441 | WP_000826132.1 | DUF2756 family protein | - |
| H1D08_RS18385 () | 3803544..3805277 | + | 1734 | WP_096939184.1 | gamma-glutamyltransferase | - |
| H1D08_RS18390 () | 3805338..3805826 | - | 489 | WP_001442056.1 | N-acetyltransferase | - |
| H1D08_RS18395 () | 3806160..3807199 | + | 1040 | Protein_3588 | oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|