MGE detailed information
MGE type: Genomic_island MGE length: 42442 bp
Accession: NZ_LR778143 Location: 1552391..1594832 Organism: Escherichia coli isolate SC422 Replicon: chromosome
Accession: NZ_LR778143 Location: 1552391..1594832 Organism: Escherichia coli isolate SC422 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1C98_RS07360 () | 1547542..1547835 | - | 294 | WP_000805509.1 | hypothetical protein | - |
| H1C98_RS07365 () | 1548057..1548875 | + | 819 | WP_000779426.1 | lipoprotein NlpA | - |
| H1C98_RS07370 () | 1548879..1549802 | - | 924 | WP_000535960.1 | carboxylate/amino acid/amine transporter | - |
| H1C98_RS07375 () | 1549913..1551097 | - | 1185 | WP_001172876.1 | sugar efflux transporter | - |
| H1C98_RS07380 () | 1551982..1552083 | - | 102 | Protein_1431 | DUF4942 domain-containing protein | - |
| H1C98_RS07385 () | 1552391..1555435 | - | 3045 | WP_089592676.1 | hypothetical protein | VF |
| H1C98_RS07390 () | 1556352..1556549 | - | 198 | WP_089581460.1 | DUF957 domain-containing protein | - |
| H1C98_RS07395 () | 1556577..1556774 | - | 198 | Protein_1434 | hypothetical protein | - |
| H1C98_RS07400 () | 1556771..1557148 | - | 378 | WP_085447097.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| H1C98_RS07405 () | 1557238..1557606 | - | 369 | WP_115425271.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| H1C98_RS07410 () | 1557680..1557901 | - | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| H1C98_RS07415 () | 1557964..1558440 | - | 477 | WP_001186773.1 | RadC family protein | - |
| H1C98_RS07420 () | 1558456..1558941 | - | 486 | WP_174490312.1 | antirestriction protein | - |
| H1C98_RS07425 () | 1559033..1559851 | - | 819 | WP_115425206.1 | DUF945 domain-containing protein | - |
| H1C98_RS07430 () | 1560177..1563023 | - | 2847 | WP_174490313.1 | Ag43/Cah family autotransporter adhesin | - |
| H1C98_RS07435 () | 1563396..1564268 | - | 873 | WP_115437803.1 | GTPase family protein | - |
| H1C98_RS07440 () | 1564378..1565397 | - | 1020 | WP_115425140.1 | transcriptional regulator | - |
| H1C98_RS07445 () | 1566895..1567467 | - | 573 | WP_143367411.1 | hypothetical protein | - |
| H1C98_RS07450 () | 1567553..1567760 | - | 208 | Protein_1445 | AlpA family transcriptional regulator | - |
| H1C98_RS07455 () | 1568473..1568685 | + | 213 | WP_032176813.1 | hemolysin expression modulator Hha | - |
| H1C98_RS07460 () | 1569301..1569870 | + | 570 | WP_143367412.1 | inovirus Gp2 family protein | - |
| H1C98_RS07465 () | 1570037..1570420 | + | 384 | WP_000271033.1 | hypothetical protein | - |
| H1C98_RS07470 () | 1570417..1570830 | + | 414 | WP_115425144.1 | hypothetical protein | - |
| H1C98_RS07475 () | 1571515..1571721 | - | 207 | WP_001406128.1 | P fimbrial regulatory protein KS71A | VF |
| H1C98_RS07480 () | 1572294..1572593 | + | 300 | WP_032341887.1 | Major pilu subunit operon regulatory protein PapB | VF |
| H1C98_RS07485 () | 1572601..1573143 | + | 543 | WP_089592655.1 | hypothetical protein | VF |
| H1C98_RS07490 () | 1573152..1575602 | + | 2451 | WP_115425145.1 | Outer membrane usher protein YraJ | VF |
| H1C98_RS07495 () | 1575595..1576395 | + | 801 | WP_115425146.1 | Chaperone protein FaeE | VF |
| H1C98_RS07500 () | 1576430..1576921 | + | 492 | WP_115425147.1 | hypothetical protein | VF |
| H1C98_RS07505 () | 1577160..1578011 | + | 852 | WP_115425148.1 | K88 fimbrial protein AC | VF |
| H1C98_RS07510 () | 1578182..1578979 | + | 798 | WP_115425149.1 | hypothetical protein | VF |
| H1C98_RS07515 () | 1579010..1579774 | + | 765 | WP_089675109.1 | hypothetical protein | VF |
| H1C98_RS07520 () | 1579791..1580564 | + | 774 | WP_001558333.1 | hypothetical protein | VF |
| H1C98_RS07525 () | 1580638..1581279 | + | 642 | WP_089592649.1 | hypothetical protein | - |
| H1C98_RS07530 () | 1581269..1582027 | + | 759 | WP_089592648.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| H1C98_RS07535 () | 1582216..1582458 | + | 243 | WP_071906207.1 | hypothetical protein | - |
| H1C98_RS07540 () | 1582436..1583054 | + | 619 | Protein_1463 | hypothetical protein | - |
| H1C98_RS07545 () | 1583089..1586952 | + | 3864 | WP_174490315.1 | hypothetical protein | VF |
| H1C98_RS07550 () | 1587236..1587697 | + | 462 | WP_180344596.1 | hypothetical protein | - |
| H1C98_RS07555 () | 1587694..1589712 | + | 2019 | WP_174490317.1 | Chromosome partition protein Smc | VF |
| H1C98_RS07560 () | 1589892..1590190 | - | 299 | Protein_1467 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| H1C98_RS07565 () | 1590582..1591538 | + | 957 | WP_000301136.1 | hypothetical protein | - |
| H1C98_RS07570 () | 1591519..1592448 | - | 930 | WP_089592721.1 | DNA (cytosine-5-)-methyltransferase | - |
| H1C98_RS07575 () | 1592703..1592805 | - | 103 | Protein_1470 | integrase | - |
| H1C98_RS07580 () | 1592966..1593262 | + | 297 | Protein_1471 | IS3 family transposase ISRaq1 | Transposase |
| H1C98_RS07585 () | 1593298..1593541 | - | 244 | Protein_1472 | integrase | - |
| H1C98_RS07590 () | 1593651..1594832 | - | 1182 | WP_105516861.1 | Prophage integrase IntS ; Integrase | Integrase |
| H1C98_RS07600 () | 1595792..1597174 | + | 1383 | WP_000834439.1 | glycoside-pentoside-hexuronide family transporter | - |
| H1C98_RS07605 () | 1597184..1599502 | + | 2319 | WP_000702903.1 | alpha-xylosidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|