MGE detailed information
MGE type: Prophage MGE length: 8604 bp
Accession: NZ_LR778142 Location: 3982380..3990983 Organism: Escherichia coli isolate SC434 Replicon: chromosome
Accession: NZ_LR778142 Location: 3982380..3990983 Organism: Escherichia coli isolate SC434 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1D10_RS19400 () | 3978180..3979217 | - | 1038 | WP_000236276.1 | oxidoreductase | - |
| H1D10_RS19405 () | 3979551..3980039 | + | 489 | WP_001442056.1 | N-acetyltransferase | - |
| H1D10_RS19410 () | 3980100..3981833 | - | 1734 | WP_096939184.1 | gamma-glutamyltransferase | - |
| H1D10_RS19415 () | 3981953..3982393 | + | 441 | WP_000826132.1 | DUF2756 family protein | - |
| H1D10_RS19420 () | 3982380..3983123 | - | 744 | WP_000073619.1 | glycerophosphodiester phosphodiesterase | - |
| H1D10_RS19425 () | 3983120..3984190 | - | 1071 | WP_000907824.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| H1D10_RS19430 () | 3984192..3985037 | - | 846 | WP_000572183.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| H1D10_RS19435 () | 3985034..3985921 | - | 888 | WP_000099282.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| H1D10_RS19440 () | 3986019..3987335 | - | 1317 | WP_021531661.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| H1D10_RS19445 () | 3987544..3987921 | - | 378 | WP_175058671.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| H1D10_RS19450 () | 3987918..3988139 | - | 222 | WP_000557315.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| H1D10_RS19455 () | 3988227..3988940 | - | 714 | WP_000416895.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| H1D10_RS19460 () | 3988942..3989709 | - | 768 | WP_033811128.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| H1D10_RS19465 () | 3989706..3990983 | - | 1278 | WP_000803817.1 | branched chain amino acid ABC transporter permease LivM | - |
| H1D10_RS19470 () | 3990980..3991906 | - | 927 | WP_001295097.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| H1D10_RS19475 () | 3991954..3993063 | - | 1110 | WP_001316697.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| H1D10_RS19480 () | 3993487..3993870 | + | 384 | WP_000778795.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| H1D10_RS19485 () | 3994058..3995161 | - | 1104 | WP_001021994.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|