MGE detailed information
MGE type: Prophage MGE length: 52175 bp
Accession: NZ_LR778141 Location: 796405..848579 Organism: Escherichia coli isolate SC407 Replicon: chromosome
Accession: NZ_LR778141 Location: 796405..848579 Organism: Escherichia coli isolate SC407 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1C92_RS03905 () | 791601..792605 | + | 1005 | WP_000994905.1 | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF | - |
| H1C92_RS03910 () | 792658..792987 | - | 330 | WP_000366959.1 | HI1450 family dsDNA-mimic protein | - |
| H1C92_RS03915 () | 793022..794482 | - | 1461 | WP_000214516.1 | cardiolipin synthase | - |
| H1C92_RS03920 () | 794625..794798 | + | 174 | WP_001309467.1 | YciY family protein | - |
| H1C92_RS03925 () | 794853..796106 | - | 1254 | WP_001299682.1 | voltage-gated potassium channel protein | - |
| H1C92_RS03930 () | 796405..796701 | - | 297 | WP_000967595.1 | YciI family protein | - |
| H1C92_RS03935 () | 796925..797644 | + | 720 | WP_001376357.1 | TonB system transport protein TonB | - |
| H1C92_RS03940 () | 797684..798082 | - | 399 | WP_000108160.1 | acyl-CoA thioester hydrolase YciA | - |
| H1C92_RS03945 () | 798187..798726 | - | 540 | WP_000808667.1 | septation protein A | - |
| H1C92_RS03950 () | 798756..799499 | - | 744 | WP_000028540.1 | envelope biogenesis factor ElyC | - |
| H1C92_RS03955 () | 799527..799616 | - | 90 | Protein_768 | YkgJ family cysteine cluster protein | - |
| H1C92_RS03960 () | 799856..800494 | + | 639 | WP_000737229.1 | outer membrane protein OmpW | - |
| H1C92_RS03965 () | 800540..801670 | - | 1131 | WP_097411379.1 | hypothetical protein ; Integrase | Integrase |
| H1C92_RS03970 () | 801648..801896 | - | 249 | WP_000113182.1 | excisionase | - |
| H1C92_RS03975 () | 801961..804432 | - | 2472 | WP_115425220.1 | exonuclease | - |
| H1C92_RS03980 () | 804513..804716 | - | 204 | WP_001090192.1 | DUF1482 family protein | - |
| H1C92_RS03985 () | 804719..804901 | - | 183 | WP_000449182.1 | cell division inhibition protein DicB | - |
| H1C92_RS03990 () | 805474..805659 | + | 186 | WP_001305873.1 | hypothetical protein | - |
| H1C92_RS03995 () | 805631..805789 | - | 159 | WP_021562152.1 | hypothetical protein | - |
| H1C92_RS04000 () | 805801..805953 | - | 153 | WP_115425312.1 | DUF1391 family protein | - |
| H1C92_RS04005 () | 806227..806514 | - | 288 | WP_000936798.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H1C92_RS04010 () | 806514..806705 | - | 192 | WP_024207685.1 | hypothetical protein | Antitoxin Detail |
| H1C92_RS04015 () | 806733..807134 | - | 402 | WP_001329851.1 | helix-turn-helix domain-containing protein | - |
| H1C92_RS04020 () | 807244..807516 | + | 273 | WP_024207686.1 | helix-turn-helix domain-containing protein | - |
| H1C92_RS04025 () | 807500..808021 | + | 522 | WP_115425301.1 | hypothetical protein | - |
| H1C92_RS04030 () | 808002..808967 | + | 966 | WP_122989178.1 | hypothetical protein | - |
| H1C92_RS04035 () | 808974..809720 | + | 747 | WP_000788975.1 | ATP-binding protein | - |
| H1C92_RS04040 () | 809743..810495 | + | 753 | WP_115425302.1 | DUF1627 domain-containing protein | - |
| H1C92_RS04045 () | 810482..810943 | + | 462 | WP_115425303.1 | ead/Ea22-like family protein | - |
| H1C92_RS04050 () | 811039..811221 | + | 183 | WP_115425304.1 | hypothetical protein | - |
| H1C92_RS04055 () | 811214..811390 | + | 177 | WP_000753067.1 | hypothetical protein | - |
| H1C92_RS04060 () | 811387..811746 | + | 360 | WP_096094114.1 | hypothetical protein | - |
| H1C92_RS04065 () | 811747..811962 | + | 216 | WP_047655285.1 | hypothetical protein | - |
| H1C92_RS04070 () | 811964..812182 | + | 219 | WP_040073347.1 | DUF4014 family protein | - |
| H1C92_RS04075 () | 812184..812549 | + | 366 | WP_103444936.1 | HNH endonuclease | - |
| H1C92_RS04080 () | 812546..813229 | + | 684 | WP_115425305.1 | hypothetical protein | - |
| H1C92_RS04085 () | 813521..813676 | + | 156 | WP_197970084.1 | type I toxin-antitoxin system Hok family toxin | - |
| H1C92_RS04090 () | 813905..814153 | + | 249 | WP_086590314.1 | type II toxin-antitoxin system HicA family toxin | - |
| H1C92_RS04095 () | 814146..814622 | + | 477 | WP_089553067.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| H1C92_RS04100 () | 814607..815041 | + | 435 | WP_134873372.1 | hypothetical protein | - |
| H1C92_RS04105 () | 815145..815417 | + | 273 | WP_089553065.1 | hypothetical protein | - |
| H1C92_RS04110 () | 815419..816468 | + | 1050 | WP_115425307.1 | DUF968 domain-containing protein | - |
| H1C92_RS04115 () | 816481..816855 | + | 375 | WP_115425308.1 | RusA family crossover junction endodeoxyribonuclease | - |
| H1C92_RS04120 () | 816852..817673 | + | 822 | WP_115425309.1 | antitermination protein | - |
| H1C92_RS04125 () | 817935..818444 | + | 510 | WP_180344230.1 | hypothetical protein | - |
| H1C92_RS04130 () | 818773..818970 | + | 198 | WP_000917767.1 | hypothetical protein | - |
| H1C92_RS04135 () | 819121..820167 | + | 1047 | WP_174490824.1 | site-specific DNA-methyltransferase | - |
| H1C92_RS04150 () | 821153..821578 | + | 426 | WP_000466940.1 | tellurite/colicin resistance protein | - |
| H1C92_RS04155 () | 821575..821727 | + | 153 | WP_115425201.1 | DUF3927 family protein | - |
| H1C92_RS04160 () | 821817..822209 | + | 393 | WP_001294586.1 | holin | - |
| H1C92_RS04165 () | 822199..822474 | + | 276 | WP_000950570.1 | phage holin family protein | - |
| H1C92_RS04170 () | 822477..822854 | + | 378 | WP_053272747.1 | M15 family metallopeptidase | - |
| H1C92_RS04175 () | 822987..823100 | + | 114 | WP_001305859.1 | hypothetical protein | - |
| H1C92_RS04180 () | 823129..823284 | + | 156 | WP_001138282.1 | hypothetical protein | - |
| H1C92_RS04185 () | 823459..823755 | + | 297 | WP_001585563.1 | hypothetical protein | - |
| H1C92_RS04190 () | 824207..824755 | + | 549 | WP_032083611.1 | terminase small subunit | - |
| H1C92_RS04195 () | 824727..826643 | + | 1917 | WP_000622382.1 | phage terminase large subunit family protein | - |
| H1C92_RS04200 () | 826647..826856 | + | 210 | WP_000263126.1 | gpW family protein | - |
| H1C92_RS04205 () | 826901..828424 | + | 1524 | WP_048816295.1 | phage portal protein | - |
| H1C92_RS04210 () | 828414..830030 | + | 1617 | WP_001253879.1 | S49 family peptidase | - |
| H1C92_RS04215 () | 830069..830404 | + | 336 | WP_115425199.1 | head decoration protein | - |
| H1C92_RS04220 () | 830473..831501 | + | 1029 | WP_042099697.1 | major capsid protein | - |
| H1C92_RS04225 () | 831552..831917 | + | 366 | WP_115425198.1 | DNA breaking-rejoining protein | - |
| H1C92_RS04230 () | 831920..832321 | + | 402 | WP_115425197.1 | hypothetical protein | - |
| H1C92_RS04235 () | 832302..833024 | + | 723 | WP_115425196.1 | hypothetical protein | - |
| H1C92_RS04240 () | 833036..833587 | + | 552 | WP_001406275.1 | hypothetical protein | - |
| H1C92_RS04245 () | 833571..834194 | + | 624 | WP_000049994.1 | phage baseplate assembly protein V | - |
| H1C92_RS04250 () | 834228..834584 | + | 357 | WP_000579232.1 | GPW/gp25 family protein | - |
| H1C92_RS04255 () | 834559..835473 | + | 915 | WP_000235847.1 | baseplate J/gp47 family protein | - |
| H1C92_RS04260 () | 835466..836056 | + | 591 | WP_105447090.1 | phage tail protein I | - |
| H1C92_RS04265 () | 836053..837480 | + | 1428 | WP_115425195.1 | phage tail protein | - |
| H1C92_RS04270 () | 837483..838025 | + | 543 | WP_115425194.1 | tail fiber assembly protein | - |
| H1C92_RS04275 () | 838080..839555 | + | 1476 | WP_115425193.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| H1C92_RS04280 () | 839552..840070 | + | 519 | WP_089552998.1 | phage major tail tube protein | - |
| H1C92_RS04285 () | 840130..840432 | + | 303 | WP_001291421.1 | phage tail assembly protein | - |
| H1C92_RS04290 () | 840550..842202 | + | 1653 | WP_105281809.1 | hypothetical protein | - |
| H1C92_RS04295 () | 842205..842693 | + | 489 | WP_000228000.1 | phage tail protein | - |
| H1C92_RS04300 () | 842668..842886 | + | 219 | WP_032083597.1 | tail protein X | - |
| H1C92_RS04305 () | 842877..843977 | + | 1101 | WP_115425192.1 | late control protein | - |
| H1C92_RS04310 () | 844003..846567 | + | 2565 | WP_115425191.1 | prophage tail fiber N-terminal domain-containing protein | - |
| H1C92_RS04315 () | 846582..847157 | + | 576 | WP_115425190.1 | DUF4376 domain-containing protein | - |
| H1C92_RS04320 () | 847277..847546 | + | 270 | WP_115425189.1 | hypothetical protein | - |
| H1C92_RS04325 () | 847551..847979 | + | 429 | WP_115425188.1 | hypothetical protein | - |
| H1C92_RS04330 () | 848019..848579 | - | 561 | WP_115425187.1 | ORF6N domain-containing protein | - |
| H1C92_RS04335 () | 848462..848848 | - | 387 | WP_174490823.1 | ash family protein | - |
| H1C92_RS04340 () | 849033..849158 | + | 126 | Protein_843 | outer membrane protein OmpW | - |
| H1C92_RS04345 () | 849218..849724 | - | 507 | WP_001079509.1 | ferritin-like domain-containing protein | - |
| H1C92_RS04350 () | 849770..850270 | - | 501 | WP_001056491.1 | ferritin-like domain-containing protein | - |
| H1C92_RS04355 () | 850356..850535 | - | 180 | WP_000807651.1 | general stress protein | - |
| H1C92_RS04360 () | 850916..851722 | - | 807 | WP_000443056.1 | tryptophan synthase subunit alpha | - |
| H1C92_RS04365 () | 851722..852915 | - | 1194 | WP_000209520.1 | tryptophan synthase subunit beta | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|