MGE detailed information
MGE type: Prophage MGE length: 50334 bp
Accession: NZ_LR778141 Location: 1148861..1199194 Organism: Escherichia coli isolate SC407 Replicon: chromosome
Accession: NZ_LR778141 Location: 1148861..1199194 Organism: Escherichia coli isolate SC407 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1C92_RS05690 () | 1145339..1146085 | + | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| H1C92_RS05695 () | 1146174..1146860 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| H1C92_RS05700 () | 1147073..1147276 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| H1C92_RS05705 () | 1147312..1148772 | - | 1461 | WP_000527751.1 | mannitol dehydrogenase family protein | - |
| H1C92_RS05710 () | 1148861..1150226 | - | 1366 | Protein_1115 | MHS family MFS transporter | - |
| H1C92_RS05715 () | 1150746..1150859 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| H1C92_RS05720 () | 1150928..1151161 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| H1C92_RS05725 () | 1151478..1152068 | + | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| H1C92_RS05730 () | 1152166..1152741 | - | 576 | WP_000885610.1 | tail fiber assembly protein | - |
| H1C92_RS05735 () | 1152741..1156091 | - | 3351 | WP_074147718.1 | prophage tail fiber N-terminal domain-containing protein | - |
| H1C92_RS05740 () | 1156156..1156755 | - | 600 | WP_063101942.1 | Outer membrane protein X | VF |
| H1C92_RS05745 () | 1156823..1160302 | - | 3480 | WP_000515751.1 | host specificity protein J | - |
| H1C92_RS05750 () | 1160363..1160965 | - | 603 | WP_000090905.1 | tail assembly protein | - |
| H1C92_RS05755 () | 1160902..1161645 | - | 744 | WP_000140764.1 | C40 family peptidase | - |
| H1C92_RS05760 () | 1161651..1162349 | - | 699 | WP_001152580.1 | phage minor tail protein L | - |
| H1C92_RS05765 () | 1162349..1162678 | - | 330 | WP_000847345.1 | phage tail protein | - |
| H1C92_RS05770 () | 1162675..1165254 | - | 2580 | WP_180344231.1 | phage tail tape measure protein | - |
| H1C92_RS05775 () | 1165247..1165681 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| H1C92_RS05780 () | 1165663..1166085 | - | 423 | WP_000479138.1 | phage minor tail protein G | - |
| H1C92_RS05785 () | 1166101..1166841 | - | 741 | WP_001406215.1 | phage tail protein | - |
| H1C92_RS05790 () | 1166849..1167244 | - | 396 | WP_087601585.1 | phage minor tail U family protein | - |
| H1C92_RS05795 () | 1167241..1167818 | - | 578 | Protein_1132 | phage tail protein | - |
| H1C92_RS05800 () | 1167830..1168183 | - | 354 | WP_000785282.1 | head-tail joining protein | - |
| H1C92_RS05805 () | 1168195..1168590 | - | 396 | WP_000158880.1 | DNA-packaging protein FI | - |
| H1C92_RS05810 () | 1168632..1169657 | - | 1026 | WP_000063224.1 | major capsid protein | - |
| H1C92_RS05815 () | 1169713..1170045 | - | 333 | WP_001549228.1 | head decoration protein | - |
| H1C92_RS05820 () | 1170055..1171374 | - | 1320 | WP_000123333.1 | S49 family peptidase | - |
| H1C92_RS05825 () | 1171355..1172956 | - | 1602 | WP_001324962.1 | phage portal protein | - |
| H1C92_RS05830 () | 1172953..1173159 | - | 207 | WP_000198149.1 | gpW family protein | - |
| H1C92_RS05835 () | 1173156..1175081 | - | 1926 | WP_001549229.1 | phage terminase large subunit family protein | - |
| H1C92_RS05840 () | 1175056..1175601 | - | 546 | WP_000453603.1 | DNA-packaging protein | - |
| H1C92_RS05845 () | 1175990..1176223 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| H1C92_RS05850 () | 1176281..1176691 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| H1C92_RS05855 () | 1176843..1177016 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| H1C92_RS05860 () | 1177188..1177343 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| H1C92_RS05865 () | 1177423..1177488 | - | 66 | WP_122985912.1 | hypothetical protein | - |
| H1C92_RS05870 () | 1177491..1177679 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| H1C92_RS05875 () | 1177690..1177902 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| H1C92_RS05880 () | 1178265..1178762 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| H1C92_RS05885 () | 1178759..1179292 | - | 534 | WP_001092971.1 | lysozyme | - |
| H1C92_RS05890 () | 1179289..1179599 | - | 311 | Protein_1151 | DUF1327 domain-containing protein | - |
| H1C92_RS05895 () | 1179604..1179819 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| H1C92_RS05900 () | 1180573..1180788 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| H1C92_RS05905 () | 1181087..1181289 | + | 203 | Protein_1154 | cold shock-like protein CspF | - |
| H1C92_RS05910 () | 1181464..1182216 | - | 753 | WP_001047131.1 | antitermination protein | - |
| H1C92_RS05915 () | 1182230..1183279 | - | 1050 | WP_001265196.1 | DUF968 domain-containing protein | - |
| H1C92_RS05920 () | 1183281..1183559 | - | 279 | WP_023140913.1 | hypothetical protein | - |
| H1C92_RS05925 () | 1183626..1183877 | - | 252 | WP_000980999.1 | hypothetical protein | - |
| H1C92_RS05930 () | 1184094..1184249 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| H1C92_RS05935 () | 1184321..1184608 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| H1C92_RS05940 () | 1184608..1184847 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| H1C92_RS05945 () | 1184872..1185177 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| H1C92_RS05950 () | 1185380..1185712 | + | 333 | WP_001349760.1 | FlxA-like family protein | - |
| H1C92_RS05955 () | 1186149..1187489 | - | 1341 | WP_000589013.1 | ISNCY family transposase ISCARN112 | Transposase |
| H1C92_RS05960 () | 1188258..1188544 | - | 287 | Protein_1165 | hypothetical protein | - |
| H1C92_RS24660 () | 1188710..1188892 | - | 183 | Protein_1166 | hypothetical protein | - |
| H1C92_RS05965 () | 1189155..1189511 | - | 357 | WP_001315552.1 | class I SAM-dependent methyltransferase | - |
| H1C92_RS05970 () | 1189508..1189930 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| H1C92_RS05975 () | 1189971..1190936 | - | 966 | WP_000054514.1 | hypothetical protein | - |
| H1C92_RS05980 () | 1190917..1191438 | - | 522 | WP_000705355.1 | hypothetical protein | - |
| H1C92_RS05985 () | 1191422..1191649 | - | 228 | WP_000921596.1 | transcriptional regulator | - |
| H1C92_RS05990 () | 1191730..1192137 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| H1C92_RS05995 () | 1192306..1192461 | + | 156 | WP_000379588.1 | DUF1391 family protein | - |
| H1C92_RS06000 () | 1192621..1192839 | + | 219 | WP_001171952.1 | hypothetical protein | - |
| H1C92_RS06005 () | 1193407..1193595 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| H1C92_RS06010 () | 1193592..1193783 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| H1C92_RS06015 () | 1193877..1196348 | + | 2472 | WP_001515375.1 | exonuclease | - |
| H1C92_RS06020 () | 1196421..1196672 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| H1C92_RS06025 () | 1196707..1197987 | + | 1281 | WP_000876979.1 | Putative defective protein IntQ ; Integrase | Integrase |
| H1C92_RS06030 () | 1198007..1198117 | - | 111 | WP_021531328.1 | hypothetical protein | - |
| H1C92_RS06035 () | 1198175..1199194 | - | 1020 | WP_000836057.1 | Zn-dependent oxidoreductase | - |
| H1C92_RS06040 () | 1199206..1200420 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| H1C92_RS06045 () | 1200626..1200952 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| H1C92_RS06050 () | 1201087..1201428 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| H1C92_RS06055 () | 1201463..1202023 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| H1C92_RS06060 () | 1202026..1202736 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| H1C92_RS06065 () | 1202844..1203149 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|