MGE detailed information
MGE type: Genomic_island MGE length: 12700 bp
Accession: NZ_LR778140 Location: 3899381..3912080 Organism: Escherichia coli isolate SC406 Replicon: chromosome
Accession: NZ_LR778140 Location: 3899381..3912080 Organism: Escherichia coli isolate SC406 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1C94_RS18835 () | 3894961..3895413 | - | 453 | WP_001059855.1 | GNAT family N-acetyltransferase | - |
| H1C94_RS18840 () | 3895410..3896465 | - | 1056 | WP_001226183.1 | DNA polymerase IV | - |
| H1C94_RS18845 () | 3896536..3897321 | - | 786 | WP_000207575.1 | putative lateral flagellar export/assembly protein LafU | - |
| H1C94_RS18850 () | 3897293..3899005 | + | 1713 | Protein_3689 | flagellar biosynthesis protein FlhA | - |
| H1C94_RS18855 () | 3899110..3899388 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| H1C94_RS18860 () | 3899381..3899737 | + | 357 | WP_001030483.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| H1C94_RS18865 () | 3899794..3900567 | - | 774 | WP_000543895.1 | hypothetical protein | VF |
| H1C94_RS18870 () | 3900753..3901013 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| H1C94_RS18875 () | 3901016..3901294 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| H1C94_RS18880 () | 3901450..3902190 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| H1C94_RS18885 () | 3902161..3902928 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| H1C94_RS18890 () | 3903134..3903712 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| H1C94_RS18895 () | 3903952..3906396 | + | 2445 | WP_000973081.1 | Acyl-coenzyme A dehydrogenase | VF |
| H1C94_RS18900 () | 3906439..3906885 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| H1C94_RS18905 () | 3907066..3907836 | + | 771 | WP_001118038.1 | 2-oxoglutaramate amidase | - |
| H1C94_RS18910 () | 3907878..3909014 | - | 1137 | Protein_3701 | ISAs1 family transposase ISEc1 | Transposase |
| H1C94_RS18915 () | 3909117..3910243 | - | 1127 | Protein_3702 | ISAs1 family transposase ISEc26 | Transposase |
| H1C94_RS18920 () | 3910324..3910509 | + | 186 | WP_122985282.1 | hypothetical protein | - |
| H1C94_RS18925 () | 3910424..3910906 | - | 483 | WP_000939262.1 | hypothetical protein | - |
| H1C94_RS18930 () | 3910890..3914541 | - | 3652 | Protein_3705 | RHS repeat protein | - |
| H1C94_RS18935 () | 3914617..3916758 | - | 2142 | WP_000103320.1 | type VI secretion system tip protein VgrG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|