MGE detailed information
MGE type: Genomic_island MGE length: 54647 bp
Accession: NZ_LR740776 Location: 4851936..4906582 Organism: Escherichia coli strain BEN2908 isolate Replicon: chromosome
Accession: NZ_LR740776 Location: 4851936..4906582 Organism: Escherichia coli strain BEN2908 isolate Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APEC2908_RS23625 () | 4848395..4848574 | - | 180 | WP_001313264.1 | hypothetical protein | - |
| APEC2908_RS23630 () | 4848622..4848816 | - | 195 | WP_126870310.1 | hypothetical protein | - |
| APEC2908_RS23635 () | 4848866..4850845 | - | 1980 | WP_000533458.1 | PhoX family phosphatase | - |
| APEC2908_RS23640 () | 4851524..4851872 | + | 349 | Protein_4612 | transposase | - |
| APEC2908_RS23645 () | 4851936..4852736 | + | 801 | Protein_4613 | IS3 family transposase ISKpn37 | Transposase |
| APEC2908_RS23650 () | 4852773..4854310 | - | 1538 | Protein_4614 | IS66 family transposase ISEc8 | Transposase |
| APEC2908_RS23655 () | 4854360..4854709 | - | 350 | Protein_4615 | IS66 family transposase ISEc8 | Transposase |
| APEC2908_RS23660 () | 4854706..4855095 | - | 390 | WP_174235615.1 | IS66 family transposase ISEc8 | Transposase |
| APEC2908_RS23665 () | 4855434..4856048 | + | 615 | Protein_4617 | transposase | - |
| APEC2908_RS23670 () | 4856153..4856444 | + | 292 | Protein_4618 | IS66 family insertion sequence element accessory protein TnpB | - |
| APEC2908_RS23675 () | 4856464..4858025 | + | 1562 | Protein_4619 | IS66 family transposase ISCro1 | Transposase |
| APEC2908_RS23680 () | 4858349..4859140 | - | 792 | WP_000977396.1 | DUF4198 domain-containing protein | - |
| APEC2908_RS23685 () | 4859159..4861129 | - | 1971 | WP_001313270.1 | Hemin receptor | VF |
| APEC2908_RS23690 () | 4861296..4862339 | - | 1044 | Protein_4622 | DDE-type integrase/transposase/recombinase | - |
| APEC2908_RS23695 () | 4863001..4863108 | - | 108 | WP_001313273.1 | hypothetical protein | - |
| APEC2908_RS23700 () | 4863117..4863308 | - | 192 | WP_197742599.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| APEC2908_RS23705 () | 4863479..4864795 | + | 1317 | WP_072668195.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| APEC2908_RS23710 () | 4864934..4865931 | + | 998 | Protein_4626 | IS110 family transposase | - |
| APEC2908_RS23715 () | 4866290..4867633 | + | 1344 | WP_000551919.1 | esterase-like activity of phytase family protein | - |
| APEC2908_RS23720 () | 4867790..4868614 | - | 825 | WP_001293448.1 | MurR/RpiR family transcriptional regulator | - |
| APEC2908_RS23725 () | 4868780..4870336 | + | 1557 | WP_000983423.1 | maltose/glucose-specific PTS transporter subunit IIC | - |
| APEC2908_RS23730 () | 4870336..4871025 | + | 690 | WP_000859647.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| APEC2908_RS23735 () | 4871530..4871868 | + | 339 | WP_000760915.1 | c-type lysozyme inhibitor | - |
| APEC2908_RS23740 () | 4872225..4872680 | - | 456 | WP_000884153.1 | sigma-70 family RNA polymerase sigma factor | - |
| APEC2908_RS23745 () | 4872742..4874007 | - | 1266 | WP_000919999.1 | YadA-like family protein | - |
| APEC2908_RS23750 () | 4874858..4874971 | - | 114 | WP_131501864.1 | transposase | - |
| APEC2908_RS23755 () | 4875234..4876187 | - | 954 | WP_000609007.1 | transketolase family protein | - |
| APEC2908_RS23760 () | 4876180..4877010 | - | 831 | WP_001101067.1 | transketolase | - |
| APEC2908_RS23765 () | 4877007..4878395 | - | 1389 | WP_000470229.1 | PTS ascorbate transporter subunit IIC | - |
| APEC2908_RS23770 () | 4878418..4878690 | - | 273 | WP_000699820.1 | PTS sugar transporter subunit IIB | - |
| APEC2908_RS23775 () | 4878769..4879212 | - | 444 | WP_001317566.1 | PTS sugar transporter subunit IIA | - |
| APEC2908_RS23780 () | 4879470..4880489 | + | 1020 | WP_001018808.1 | LacI family DNA-binding transcriptional regulator | - |
| APEC2908_RS23785 () | 4881085..4881276 | + | 192 | WP_001366542.1 | hypothetical protein | - |
| APEC2908_RS23790 () | 4881345..4881593 | + | 249 | WP_001323514.1 | osmoprotectant transport activator ProQ | - |
| APEC2908_RS23795 () | 4881611..4882159 | - | 549 | WP_001167444.1 | hypothetical protein | - |
| APEC2908_RS23800 () | 4882437..4882670 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| APEC2908_RS23805 () | 4882694..4883311 | - | 618 | WP_063116172.1 | hypothetical protein | - |
| APEC2908_RS23810 () | 4883326..4883475 | + | 150 | WP_001385640.1 | hypothetical protein | - |
| APEC2908_RS23815 () | 4883683..4884414 | - | 732 | WP_161476297.1 | inovirus Gp2 family protein | - |
| APEC2908_RS23820 () | 4885922..4887052 | - | 1131 | WP_000147743.1 | hypothetical protein | - |
| APEC2908_RS23825 () | 4887237..4888121 | + | 885 | WP_000010392.1 | 50S ribosome-binding GTPase | - |
| APEC2908_RS23830 () | 4888240..4888917 | + | 678 | WP_001097368.1 | hypothetical protein | - |
| APEC2908_RS23835 () | 4888923..4889156 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| APEC2908_RS23840 () | 4889246..4890064 | + | 819 | WP_001175153.1 | DUF945 domain-containing protein | - |
| APEC2908_RS23845 () | 4890090..4890230 | - | 141 | WP_161476298.1 | hypothetical protein | - |
| APEC2908_RS23850 () | 4890330..4890809 | + | 480 | WP_161476299.1 | antirestriction protein | - |
| APEC2908_RS23855 () | 4890824..4891300 | + | 477 | WP_001384029.1 | RadC family protein | - |
| APEC2908_RS23860 () | 4891387..4891608 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| APEC2908_RS23865 () | 4891688..4892056 | + | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| APEC2908_RS23870 () | 4892146..4892523 | + | 378 | WP_001094444.1 | TA system toxin CbtA family protein | Toxin Detail |
| APEC2908_RS23875 () | 4892520..4893008 | + | 489 | WP_000761685.1 | hypothetical protein | - |
| APEC2908_RS23880 () | 4893028..4893225 | + | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| APEC2908_RS23885 () | 4893310..4893456 | + | 147 | WP_001290178.1 | hypothetical protein | - |
| APEC2908_RS23890 () | 4894409..4896445 | + | 2037 | WP_021512607.1 | hypothetical protein | - |
| APEC2908_RS23895 () | 4896844..4897023 | - | 180 | WP_001298063.1 | hypothetical protein | - |
| APEC2908_RS23900 () | 4897068..4897940 | - | 873 | WP_000168586.1 | HNH endonuclease | - |
| APEC2908_RS23905 () | 4898022..4898144 | + | 123 | WP_001298017.1 | hypothetical protein | - |
| APEC2908_RS23910 () | 4898152..4899132 | - | 981 | WP_000991428.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| APEC2908_RS23915 () | 4899197..4900303 | - | 1107 | WP_001298082.1 | N-acetylneuraminate epimerase | - |
| APEC2908_RS23920 () | 4900323..4901039 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| APEC2908_RS23925 () | 4902505..4903107 | + | 603 | WP_000790574.1 | ISKra4 family transposase ISCep1 | VF |
| APEC2908_RS23930 () | 4903585..4904181 | + | 597 | WP_000044708.1 | ISKra4 family transposase ISCep1 | VF |
| APEC2908_RS23935 () | 4904662..4905216 | + | 555 | WP_000695580.1 | Type-1 fimbrial protein, A chain | VF |
| APEC2908_RS23940 () | 4905281..4905820 | + | 540 | WP_000824098.1 | putative major fimbrial subunit LpfA | VF |
| APEC2908_RS23945 () | 4905857..4906582 | + | 726 | WP_000066579.1 | Chaperone protein FimC | VF |
| APEC2908_RS23950 () | 4906648..4909284 | + | 2637 | WP_000120954.1 | fimbrial usher FimD | - |
| APEC2908_RS23955 () | 4909294..4909824 | + | 531 | WP_001244821.1 | type 1 fimbria minor subunit FimF | - |
| APEC2908_RS23960 () | 4909837..4910340 | + | 504 | WP_000870578.1 | type 1 fimbria minor subunit FimG | - |
| APEC2908_RS23965 () | 4910360..4911262 | + | 903 | WP_161476300.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| APEC2908_RS23970 () | 4911435..4911542 | - | 108 | Protein_4678 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|